RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 LRFN3Q9BTN0 628 aa10.31□□□□□ -0.76
MRE11-208ENST00000538923 UBE2ZQ9H832 354 aaPredicted RBP10.31□□□□□ -0.76
MRE11-208ENST00000538923 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.3□□□□□ -0.76
MRE11-208ENST00000538923 C17orf102A2RUQ5 167 aa10.3□□□□□ -0.76
MRE11-208ENST00000538923 PPP1R11O60927 126 aaPredicted RBP10.3□□□□□ -0.76
MRE11-208ENST00000538923 CAND2O75155 1236 aa10.3□□□□□ -0.76
MRE11-208ENST00000538923 UBA1P22314 1058 aaKnown RBP10.3□□□□□ -0.76
MRE11-208ENST00000538923 CCND2P30279 289 aa10.3□□□□□ -0.76
MRE11-208ENST00000538923 HOXA13P31271 388 aaPredicted RBP10.3□□□□□ -0.76
MRE11-208ENST00000538923 HTRA4P83105 476 aaPredicted RBP10.3□□□□□ -0.76
MRE11-208ENST00000538923 MBTPS1Q14703 1052 aa10.3□□□□□ -0.76
MRE11-208ENST00000538923 PTPROQ16827 1216 aa10.3□□□□□ -0.76
MRE11-208ENST00000538923 LEXMQ3ZCV2 418 aa10.3□□□□□ -0.76
MRE11-208ENST00000538923 B4GALNT3Q6L9W6 998 aa10.3□□□□□ -0.76
MRE11-208ENST00000538923 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.3□□□□□ -0.76
MRE11-208ENST00000538923 PLEKHM2Q8IWE5 1019 aa10.3□□□□□ -0.76
MRE11-208ENST00000538923 STAG2Q8N3U4 1231 aa10.3□□□□□ -0.76
MRE11-208ENST00000538923 ATP6V0A1Q93050 837 aa10.3□□□□□ -0.76
MRE11-208ENST00000538923 MTMR8Q96EF0 704 aa10.3□□□□□ -0.76
MRE11-208ENST00000538923 C16orf70Q9BSU1 422 aa10.3□□□□□ -0.76
MRE11-208ENST00000538923 MLXIPQ9HAP2 919 aa10.3□□□□□ -0.76
MRE11-208ENST00000538923 MAD2L2Q9UI95 211 aa10.3□□□□□ -0.76
MRE11-208ENST00000538923 PI4K2BG5E9Z4 385 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 H3BRB1 525 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 GCOM1H8Y6P7 765 aaPredicted RBP10.29□□□□□ -0.76
MRE11-208ENST00000538923 SORBS3O60504 671 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 POLR2MP0CAP2 368 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 KCNA5P22460 613 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 HOXC8P31273 242 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 SP2Q02086 613 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 NUCB1Q02818 461 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 NR5A1Q13285 461 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 NNTQ13423 1086 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 PLEKHG4Q58EX7 1191 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 MYOCDQ8IZQ8 938 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 DBF4BQ8NFT6 615 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 SEPT8Q92599 483 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 ZNF592Q92610 1267 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 MRPL38Q96DV4 380 aaKnown RBP10.29□□□□□ -0.76
MRE11-208ENST00000538923 SAMD11Q96NU1 681 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 KCTD15Q96SI1 283 aaPredicted RBP10.29□□□□□ -0.76
MRE11-208ENST00000538923 C17orf80Q9BSJ5 609 aa10.29□□□□□ -0.76
MRE11-208ENST00000538923 TUT1Q9H6E5 874 aaKnown RBP10.29□□□□□ -0.76
MRE11-208ENST00000538923 SCN5AQ14524 2016 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 PALM3A6NDB9 673 aaPredicted RBP10.28□□□□□ -0.76
MRE11-208ENST00000538923 NOP56O00567 594 aaKnown RBP10.28□□□□□ -0.76
MRE11-208ENST00000538923 STAM2O75886 525 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 SMIM10L2AP0DMW4 78 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 SMIM10L2BP0DMW5 78 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 GNAT1P11488 350 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 GRM5P41594 1212 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 TRDNQ13061 729 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 SEC23AQ15436 765 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 GNPTABQ3T906 1256 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 FCHSD1Q86WN1 690 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 HOMER1Q86YM7 354 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 FAM178BQ8IXR5 827 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 GJD3Q8N144 294 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 IL31RAQ8NI17 732 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.28□□□□□ -0.76
MRE11-208ENST00000538923 HPS1Q92902 700 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 TOP1MTQ969P6 601 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 YME1L1Q96TA2 773 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 USP26Q9BXU7 913 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 C11orf16Q9NQ32 467 aa10.28□□□□□ -0.76
MRE11-208ENST00000538923 COL4A4P53420 1690 aaPredicted RBP10.28□□□□□ -0.76
MRE11-208ENST00000538923 PNMA6FA0A0J9YX94 578 aa10.27□□□□□ -0.77
MRE11-208ENST00000538923 ERICH2A1L162 156 aa10.27□□□□□ -0.77
MRE11-208ENST00000538923 FAM86C2PA6NEL3 165 aa10.27□□□□□ -0.77
MRE11-208ENST00000538923 TREHO43280 583 aa10.27□□□□□ -0.77
MRE11-208ENST00000538923 LGALS2P05162 132 aa10.27□□□□□ -0.77
MRE11-208ENST00000538923 NEDD9Q14511 834 aa10.27□□□□□ -0.77
MRE11-208ENST00000538923 GRM4Q14833 912 aa10.27□□□□□ -0.77
MRE11-208ENST00000538923 EPC2Q52LR7 807 aa10.27□□□□□ -0.77
MRE11-208ENST00000538923 TIGD5Q53EQ6 642 aa10.27□□□□□ -0.77
MRE11-208ENST00000538923 APBB2Q92870 758 aa10.27□□□□□ -0.77
MRE11-208ENST00000538923 INPP4AQ96PE3 977 aaPredicted RBP10.27□□□□□ -0.77
MRE11-208ENST00000538923 PIGSQ96S52 555 aa10.27□□□□□ -0.77
MRE11-208ENST00000538923 RNPEPQ9H4A4 650 aa10.27□□□□□ -0.77
MRE11-208ENST00000538923 RIOX1Q9H6W3 641 aa10.27□□□□□ -0.77
MRE11-208ENST00000538923 CD320Q9NPF0 282 aa10.27□□□□□ -0.77
MRE11-208ENST00000538923 ZNF215Q9UL58 517 aaPredicted RBP10.27□□□□□ -0.77
MRE11-208ENST00000538923 PRR33A8MZF0 331 aa10.26□□□□□ -0.77
MRE11-208ENST00000538923 SPATA31C2B4DYI2 1134 aa10.26□□□□□ -0.77
MRE11-208ENST00000538923 H3BNC9 293 aa10.26□□□□□ -0.77
MRE11-208ENST00000538923 FIBPO43427 364 aa10.26□□□□□ -0.77
MRE11-208ENST00000538923 CTSHP09668 335 aa10.26□□□□□ -0.77
MRE11-208ENST00000538923 ALADP13716 330 aa10.26□□□□□ -0.77
MRE11-208ENST00000538923 ICAM3P32942 547 aa10.26□□□□□ -0.77
MRE11-208ENST00000538923 RAB15P59190 212 aa10.26□□□□□ -0.77
MRE11-208ENST00000538923 MCCD1P59942 119 aaPredicted RBP10.26□□□□□ -0.77
MRE11-208ENST00000538923 SART3Q15020 963 aaKnown RBP10.26□□□□□ -0.77
MRE11-208ENST00000538923 METTL7BQ6UX53 244 aa10.26□□□□□ -0.77
MRE11-208ENST00000538923 CYB5R4Q7L1T6 521 aa10.26□□□□□ -0.77
MRE11-208ENST00000538923 NEK9Q8TD19 979 aa10.26□□□□□ -0.77
MRE11-208ENST00000538923 GPR20Q99678 358 aa10.26□□□□□ -0.77
MRE11-208ENST00000538923 IFIH1Q9BYX4 1025 aaKnown RBP10.26□□□□□ -0.77
MRE11-208ENST00000538923 SETD4Q9NVD3 440 aa10.26□□□□□ -0.77
MRE11-208ENST00000538923 FAM50BQ9Y247 325 aa10.26□□□□□ -0.77
MRE11-208ENST00000538923 FRMPD4Q14CM0 1322 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms