RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 ZEB2O60315 1214 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 TBCAO75347 108 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 FARP2O94887 1054 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 EYA4O95677 639 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 CCNE2O96020 404 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 MYL1P05976 194 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 AKR1A1P14550 325 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 CTGFP29279 349 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 TCF7P36402 384 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 SPIRE1Q08AE8 756 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 DUSP28Q4G0W2 176 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 TMEM119Q4V9L6 283 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 L1TD1Q5T7N2 865 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 ISM2Q6H9L7 571 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 DYMQ7RTS9 669 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 PIGOQ8TEQ8 1089 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 ERCC4Q92889 916 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 NAT10Q9H0A0 1025 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 BHMT2Q9H2M3 363 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 TSPY26PQ9H489 355 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 SMARCAD1Q9H4L7 1026 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 EXOC1Q9NV70 894 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 FLRT1Q9NZU1 646 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 KIAA1468Q9P260 1216 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 SEPT9Q9UHD8 586 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 NRBP1Q9UHY1 535 aa11.88□□□□□ -0.51
TNFRSF1A-211ENST00000538363 RBM47A0AV96 593 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 ARIH2O95376 493 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 HMGCRP04035 888 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 RARBP10826 455 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 XRCC6P12956 609 aaKnown RBP eCLIP11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 ELNP15502 786 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 SMPD1P17405 629 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 IRF5Q13568 498 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 HYIQ5T013 277 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 CCDC62Q6P9F0 684 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 ABHD15Q6UXT9 468 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 CCDC65Q8IXS2 484 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 ELOA2Q8IYF1 753 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 AFG1LQ8WV93 481 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 FAM167AQ96KS9 214 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 CEP170P1Q96L14 293 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 HSD17B14Q9BPX1 270 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 BCAS3Q9H6U6 928 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 ANO10Q9NW15 660 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 DACH1Q9UI36 760 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 ZNF215Q9UL58 517 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 DOCK5Q9H7D0 1870 aa11.87□□□□□ -0.51
TNFRSF1A-211ENST00000538363 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 GSTTP1A0A1W2PQM5 241 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 FOXN1O15353 648 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 FAM13AO94988 1023 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 RPN1P04843 607 aaKnown RBP11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 MYL3P08590 195 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 SPATA31C1P0DKV0 1188 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 MARK3P27448 753 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 YWHABP31946 246 aaKnown RBP11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 CPT1AP50416 773 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 PSMC6P62333 389 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 CAP1Q01518 475 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 RAD51AP2Q09MP3 1159 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 STIM1Q13586 685 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 E2F4Q16254 413 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 ECM1Q16610 540 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 STX1AQ16623 288 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 DGKDQ16760 1214 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 XKR3Q5GH77 459 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 GJC2Q5T442 439 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 LRSAM1Q6UWE0 723 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 TLK2Q86UE8 772 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 C4orf19Q8IY42 314 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 SLAIN1Q8ND83 568 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 TRIB2Q92519 343 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 VTI1AQ96AJ9 217 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 GPR20Q99678 358 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 GTPBP4Q9BZE4 634 aaKnown RBP11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 ANKEF1Q9NU02 776 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 PCDHA5Q9Y5H7 936 aa11.86□□□□□ -0.51
TNFRSF1A-211ENST00000538363 C6orf222P0C671 652 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 ZNF865P0CJ78 1059 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 CASP1P29466 404 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 GRK4P32298 578 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 PRKCEQ02156 737 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 TYRO3Q06418 890 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 ARHGAP1Q07960 439 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 CACNB2Q08289 660 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 CUL4BQ13620 913 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 HSDL1Q3SXM5 330 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 MTERF2Q49AM1 385 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 PADI6Q6TGC4 694 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 MAEAQ7L5Y9 396 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 SYT2Q8N9I0 419 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 PPTC7Q8NI37 304 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 PXYLP1Q8TE99 480 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 DDX12PQ92771 950 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 GSDMAQ96QA5 445 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 C7orf25Q9BPX7 421 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 BLOC1S4Q9NUP1 217 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 PANK4Q9NVE7 773 aa11.85□□□□□ -0.51
TNFRSF1A-211ENST00000538363 KBTBD4Q9NVX7 518 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms