RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 AAASQ9NRG9 546 aa11.35□□□□□ -0.59
PRKAB1-204ENST00000538271 KIAA1468Q9P260 1216 aa11.35□□□□□ -0.59
PRKAB1-204ENST00000538271 HIDE1A8MVS5 230 aa11.34□□□□□ -0.59
PRKAB1-204ENST00000538271 FOXD2O60548 495 aaPredicted RBP11.34□□□□□ -0.59
PRKAB1-204ENST00000538271 TOP3BO95985 862 aaKnown RBP11.34□□□□□ -0.59
PRKAB1-204ENST00000538271 F2P00734 622 aa11.34□□□□□ -0.59
PRKAB1-204ENST00000538271 FDX1P10109 184 aa11.34□□□□□ -0.59
PRKAB1-204ENST00000538271 ZAP70P43403 619 aa11.34□□□□□ -0.59
PRKAB1-204ENST00000538271 DGKDQ16760 1214 aa11.34□□□□□ -0.59
PRKAB1-204ENST00000538271 OTOP3Q7RTS5 596 aa11.34□□□□□ -0.59
PRKAB1-204ENST00000538271 ARHGEF3Q9NR81 526 aa11.34□□□□□ -0.59
PRKAB1-204ENST00000538271 HCFC2Q9Y5Z7 792 aa11.34□□□□□ -0.59
PRKAB1-204ENST00000538271 TICRRQ7Z2Z1 1910 aa11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 CAND2O75155 1236 aa11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 IDH1O75874 414 aaKnown RBP11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 FGF18O76093 207 aa11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 CDK8P49336 464 aa11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 ARHGAP1Q07960 439 aa11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 APOBRQ0VD83 1088 aa11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 COL28A1Q2UY09 1125 aa11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 PSAPL1Q6NUJ1 521 aa11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 KANK3Q6NY19 840 aa11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 TSSK4Q6SA08 328 aa11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 C12orf76Q8N812 135 aaPredicted RBP11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 GPR152Q8TDT2 470 aa11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 GPR20Q99678 358 aa11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 BCO2Q9BYV7 579 aa11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 TMEM260Q9NX78 707 aa11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 PCDHB12Q9Y5F1 795 aa11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 GREB1LQ9C091 1923 aaPredicted RBP11.33□□□□□ -0.6
PRKAB1-204ENST00000538271 SMAPO00193 183 aa11.32□□□□□ -0.6
PRKAB1-204ENST00000538271 ZNF286BP0CG31 522 aa11.32□□□□□ -0.6
PRKAB1-204ENST00000538271 SRFP11831 508 aa11.32□□□□□ -0.6
PRKAB1-204ENST00000538271 PLA2G2AP14555 144 aa11.32□□□□□ -0.6
PRKAB1-204ENST00000538271 BAATQ14032 418 aaPredicted RBP11.32□□□□□ -0.6
PRKAB1-204ENST00000538271 TTC39AQ5SRH9 613 aa11.32□□□□□ -0.6
PRKAB1-204ENST00000538271 CCDC62Q6P9F0 684 aa11.32□□□□□ -0.6
PRKAB1-204ENST00000538271 WWC1Q8IX03 1113 aa11.32□□□□□ -0.6
PRKAB1-204ENST00000538271 RSAD2Q8WXG1 361 aa11.32□□□□□ -0.6
PRKAB1-204ENST00000538271 TCF25Q9BQ70 676 aa11.32□□□□□ -0.6
PRKAB1-204ENST00000538271 SCNM1Q9BWG6 230 aa11.32□□□□□ -0.6
PRKAB1-204ENST00000538271 LSM14BQ9BX40 385 aaKnown RBP11.32□□□□□ -0.6
PRKAB1-204ENST00000538271 TMEM134Q9H6X4 195 aa11.32□□□□□ -0.6
PRKAB1-204ENST00000538271 DCP1AQ9NPI6 582 aaPredicted RBP11.32□□□□□ -0.6
PRKAB1-204ENST00000538271 MYH4Q9Y623 1939 aa11.32□□□□□ -0.6
PRKAB1-204ENST00000538271 PIEZO2Q9H5I5 2752 aa11.32□□□□□ -0.6
PRKAB1-204ENST00000538271 GH1P01241 217 aa11.31□□□□□ -0.6
PRKAB1-204ENST00000538271 AASDHQ4L235 1098 aaPredicted RBP11.31□□□□□ -0.6
PRKAB1-204ENST00000538271 DCLRE1AQ6PJP8 1040 aa11.31□□□□□ -0.6
PRKAB1-204ENST00000538271 CHST3Q7LGC8 479 aa11.31□□□□□ -0.6
PRKAB1-204ENST00000538271 SLC44A3Q8N4M1 653 aa11.31□□□□□ -0.6
PRKAB1-204ENST00000538271 CELF5Q8N6W0 485 aaKnown RBP11.31□□□□□ -0.6
PRKAB1-204ENST00000538271 FEZF2Q8TBJ5 459 aa11.31□□□□□ -0.6
PRKAB1-204ENST00000538271 SDR42E1Q8WUS8 393 aa11.31□□□□□ -0.6
PRKAB1-204ENST00000538271 ATP6V0A1Q93050 837 aa11.31□□□□□ -0.6
PRKAB1-204ENST00000538271 CRNKL1Q9BZJ0 848 aaKnown RBP11.31□□□□□ -0.6
PRKAB1-204ENST00000538271 ENTPD7Q9NQZ7 604 aa11.31□□□□□ -0.6
PRKAB1-204ENST00000538271 RABGEF1Q9UJ41 708 aa11.31□□□□□ -0.6
PRKAB1-204ENST00000538271 FREM2Q5SZK8 3169 aa11.31□□□□□ -0.6
PRKAB1-204ENST00000538271 GREB1Q4ZG55 1949 aa11.31□□□□□ -0.6
PRKAB1-204ENST00000538271 BAZ2AQ9UIF9 1905 aaKnown RBP11.31□□□□□ -0.6
PRKAB1-204ENST00000538271 TREHO43280 583 aa11.3□□□□□ -0.6
PRKAB1-204ENST00000538271 EDNRBP24530 442 aa11.3□□□□□ -0.6
PRKAB1-204ENST00000538271 STARD6P59095 220 aa11.3□□□□□ -0.6
PRKAB1-204ENST00000538271 NONOQ15233 471 aaKnown RBP eCLIP11.3□□□□□ -0.6
PRKAB1-204ENST00000538271 LY6KQ17RY6 165 aa11.3□□□□□ -0.6
PRKAB1-204ENST00000538271 CCDC149Q6ZUS6 474 aa11.3□□□□□ -0.6
PRKAB1-204ENST00000538271 RASGRP2Q7LDG7 609 aa11.3□□□□□ -0.6
PRKAB1-204ENST00000538271 THNSL1Q8IYQ7 743 aa11.3□□□□□ -0.6
PRKAB1-204ENST00000538271 MYL10Q9BUA6 226 aa11.3□□□□□ -0.6
PRKAB1-204ENST00000538271 FAM126AQ9BYI3 521 aaPredicted RBP11.3□□□□□ -0.6
PRKAB1-204ENST00000538271 NGRNQ9NPE2 291 aaKnown RBP11.3□□□□□ -0.6
PRKAB1-204ENST00000538271 NYAP2Q9P242 653 aa11.3□□□□□ -0.6
PRKAB1-204ENST00000538271 MAGEB6P1A0A0J9YX57 407 aa11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 C17orf102A2RUQ5 167 aa11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 ARHGAP6O43182 974 aa11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 PRB1P04280 392 aa11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 GHRP10912 638 aa11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 GATMP50440 423 aa11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 ZNF252P-AS1Q0IIN9 211 aa11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 FAM26DQ5JW98 314 aa11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 SPOUT1Q5T280 376 aaKnown RBP11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 STPG1Q5TH74 334 aa11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 NYAP1Q6ZVC0 841 aa11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 C16orf86Q6ZW13 317 aa11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 PROSER1Q86XN7 944 aa11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 NPAS4Q8IUM7 802 aa11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 RPAP2Q8IXW5 612 aaPredicted RBP11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 LZTS1Q9Y250 596 aa11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 SDK1Q7Z5N4 2213 aa11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 ANKRD17O75179 2603 aaKnown RBP11.29□□□□□ -0.6
PRKAB1-204ENST00000538271 C2orf16Q68DN1 1984 aa11.28□□□□□ -0.6
PRKAB1-204ENST00000538271 TMEM232C9JQI7 657 aa11.28□□□□□ -0.6
PRKAB1-204ENST00000538271 GIPC1O14908 333 aa11.28□□□□□ -0.6
PRKAB1-204ENST00000538271 CLASP2O75122 1294 aaKnown RBP11.28□□□□□ -0.6
PRKAB1-204ENST00000538271 UBTFL1P0CB47 393 aaPredicted RBP11.28□□□□□ -0.6
PRKAB1-204ENST00000538271 HOXC8P31273 242 aa11.28□□□□□ -0.6
PRKAB1-204ENST00000538271 NOVA1P51513 510 aaKnown RBP11.28□□□□□ -0.6
PRKAB1-204ENST00000538271 CCDC158Q5M9N0 1113 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms