RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 RXRAP19793 462 aa12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 LMAN1P49257 510 aa12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 CKAP4Q07065 602 aaKnown RBP12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 TSR1Q2NL82 804 aaKnown RBP12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 WDR93Q6P2C0 686 aa12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 FANCBQ8NB91 859 aa12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 EIF3CQ99613 913 aaKnown RBP12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 DESI2Q9BSY9 194 aa12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 CSRNP2Q9H175 543 aa12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 LZTFL1Q9NQ48 299 aa12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 A1CFQ9NQ94 594 aaKnown RBP12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 XPNPEP3Q9NQH7 507 aa12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 IL17RBQ9NRM6 502 aa12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 SYNPO2Q9UMS6 1093 aa12.85□□□□□ -0.35
CHRNB1-202ENST00000536404 A0A087WUV0 522 aaPredicted RBP12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 CCDC189A1A4V9 331 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 LRRC10BA6NIK2 292 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 SOWAHDA6NJG2 315 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 RARBP10826 455 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 TRAPPC10P48553 1259 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 SNAP25P60880 206 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 IRX1P78414 480 aaPredicted RBP12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 LRIT3Q3SXY7 679 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 TRIM60Q495X7 471 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 IQCEQ6IPM2 695 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 RAD9BQ6WBX8 426 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 PAGE5Q96GU1 130 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 ANKZF1Q9H8Y5 726 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 RWDD2AQ9UIY3 292 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 L1RE1Q9UN81 338 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 PCDHB6Q9Y5E3 794 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 TSPY2A6NKD2 308 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 DPYDQ12882 1025 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 C11orf91Q3C1V1 193 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 ZNF662Q6ZS27 426 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 APTXQ7Z2E3 356 aaKnown RBP12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 ZNF654Q8IZM8 581 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 ESR2Q92731 530 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 GMCL1Q96IK5 515 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 FGD4Q96M96 766 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 LBHD1Q9BQE6 289 aaPredicted RBP12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 HAUS4Q9H6D7 363 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 HOMER2Q9NSB8 354 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 ANAPC4Q9UJX5 808 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 STX8Q9UNK0 236 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 PHF24Q9UPV7 400 aa12.84□□□□□ -0.35
CHRNB1-202ENST00000536404 KLHL33A6NCF5 533 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 N4BP3O15049 544 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 PRPF3O43395 683 aaKnown RBP12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 AKR1A1P14550 325 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 SLC1A4P43007 532 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 OAZ1P54368 228 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 SNX17Q15036 470 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 SPECC1Q5M775 1068 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 CCDC70Q6NSX1 233 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 EP400NLQ6ZTU2 488 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 KCTD1Q719H9 257 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 Q7L0L9 218 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 ANKRD35Q8N283 1001 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 CHST13Q8NET6 341 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 NOC3LQ8WTT2 800 aaKnown RBP12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 CHURC1Q8WUH1 139 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 RUBCNQ92622 972 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 AGBL1Q96MI9 1066 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 FAM210AQ96ND0 272 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 PRDM5Q9NQX1 630 aaPredicted RBP12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 PUF60Q9UHX1 559 aaKnown RBP12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 MYO6Q9UM54 1294 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 KCNJ14Q9UNX9 436 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 MTMR7Q9Y216 660 aa12.83□□□□□ -0.36
CHRNB1-202ENST00000536404 LAMA2P24043 3122 aaKnown RBP12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 TARSL2A2RTX5 802 aaKnown RBP12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 TRIM43BA6NCK2 446 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 TMCO5BA8MYB1 307 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 GTPBP6O43824 516 aaPredicted RBP12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 CASP14P31944 242 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 NT5C2P49902 561 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 STAT2P52630 851 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 KRT83P78385 493 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 CNTN2Q02246 1040 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 IKQ13123 557 aaPredicted RBP12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 MCM6Q14566 821 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 HSP90AA4PQ58FG1 418 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 RCSD1Q6JBY9 416 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 MAMDC4Q6UXC1 1216 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 RNF180Q86T96 592 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 FAM160B2Q86V87 743 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 FMNL3Q8IVF7 1028 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 SLC35F6Q8N357 371 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 TRIM43Q96BQ3 446 aaPredicted RBP12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 IQCDQ96DY2 449 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 MYL10Q9BUA6 226 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 SENP2Q9HC62 589 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 PDE11AQ9HCR9 933 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 ABHD10Q9NUJ1 306 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 VPS18Q9P253 973 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 PRKAG2Q9UGJ0 569 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 FBXO40Q9UH90 709 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 FAM184BQ9ULE4 1060 aa12.82□□□□□ -0.36
CHRNB1-202ENST00000536404 ZNF536O15090 1300 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms