RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 CCL23P55773 120 aa12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 IGBP1P78318 339 aa12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 PRKCEQ02156 737 aa12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 RESTQ13127 1097 aa12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 ORC2Q13416 577 aaPredicted RBP12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 GPNMBQ14956 572 aa12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 NCAPH2Q6IBW4 605 aa12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TRMT1LQ7Z2T5 733 aaKnown RBP12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 BANK1Q8NDB2 785 aa12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 SCLYQ96I15 445 aa12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 LBHD1Q9BQE6 289 aaPredicted RBP12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 PCDHA12Q9UN75 941 aa12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TMEM150BA6NC51 233 aa12.73□□□□□ -0.37
TNFRSF1A-208ENST00000536194 PITPNM1O00562 1244 aa12.73□□□□□ -0.37
TNFRSF1A-208ENST00000536194 STX6O43752 255 aa12.73□□□□□ -0.37
TNFRSF1A-208ENST00000536194 MARCH6O60337 910 aa12.73□□□□□ -0.37
TNFRSF1A-208ENST00000536194 HBP1O60381 514 aa12.73□□□□□ -0.37
TNFRSF1A-208ENST00000536194 BMP8BP34820 402 aa12.73□□□□□ -0.37
TNFRSF1A-208ENST00000536194 FPGSQ05932 587 aa12.73□□□□□ -0.37
TNFRSF1A-208ENST00000536194 PTGDRQ13258 359 aa12.73□□□□□ -0.37
TNFRSF1A-208ENST00000536194 IL17AQ16552 155 aa12.73□□□□□ -0.37
TNFRSF1A-208ENST00000536194 RILPL1Q5EBL4 403 aa12.73□□□□□ -0.37
TNFRSF1A-208ENST00000536194 C16orf59Q7L2K0 433 aa12.73□□□□□ -0.37
TNFRSF1A-208ENST00000536194 CKAP2LQ8IYA6 745 aa12.73□□□□□ -0.37
TNFRSF1A-208ENST00000536194 CAGE1Q8TC20 777 aa12.73□□□□□ -0.37
TNFRSF1A-208ENST00000536194 BBXQ8WY36 941 aaPredicted RBP12.73□□□□□ -0.37
TNFRSF1A-208ENST00000536194 RGL1Q9NZL6 768 aa12.73□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TUBE1Q9UJT0 475 aa12.73□□□□□ -0.37
TNFRSF1A-208ENST00000536194 RRN3P2A6NIE6 340 aa12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 OATP04181 439 aa12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 IQCF3P0C7M6 154 aa12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 GNAT1P11488 350 aa12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TECP42680 631 aa12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 BFSP2Q13515 415 aa12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 PKP1Q13835 747 aa12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 MBTPS1Q14703 1052 aa12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 EPHA7Q15375 998 aa12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 ZNF618Q5T7W0 954 aa12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 FAM173BQ6P4H8 233 aa12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 BRAPQ7Z569 592 aa12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 DYDC2Q96IM9 177 aa12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 CEP89Q96ST8 783 aa12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 OSBPL7Q9BZF2 842 aa12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 FTOQ9C0B1 505 aaKnown RBP eCLIP12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 UBE2OQ9C0C9 1292 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 PTPRSQ13332 1948 aa12.72□□□□□ -0.37
TNFRSF1A-208ENST00000536194 COL1A2P08123 1366 aa12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 C22orf31O95567 290 aa12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 P4HBP07237 508 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 HSP90AA1P07900 732 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 ACRP10323 421 aa12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 KLRC1P26715 233 aa12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 QARSP47897 775 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 PSMC5P62195 406 aa12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 ATP2C1P98194 919 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 CYP4A11Q02928 519 aa12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 CTTNQ14247 550 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TARBP2Q15633 366 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 ZNF484Q5JVG2 852 aa12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 C9orf50Q5SZB4 431 aa12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 MTHFD1LQ6UB35 978 aa12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 ANO5Q75V66 913 aa12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 LRRC8DQ7L1W4 858 aa12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TMEM199Q8N511 208 aa12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 FAM167AQ96KS9 214 aa12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 HSD17B14Q9BPX1 270 aa12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 EIF2AK1Q9BQI3 630 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 SH2D3AQ9BRG2 576 aa12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 LXNQ9BS40 222 aa12.71□□□□□ -0.37
TNFRSF1A-208ENST00000536194 ZBTB39O15060 712 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 NBNO60934 754 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 SLITRK3O94933 977 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CTSHP09668 335 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 SPATA31C1P0DKV0 1188 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 SELPP16109 830 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 THPOP40225 353 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 PRPHP41219 470 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 PPIGQ13427 754 aaKnown RBP eCLIP12.7□□□□□ -0.388e-8■■■■□ 26.7
TNFRSF1A-208ENST00000536194 SHHQ15465 462 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 XKR3Q5GH77 459 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 TMEM240Q5SV17 173 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 PLA2G4FQ68DD2 849 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 TAF2Q6P1X5 1199 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 RPAINQ86UA6 219 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 C4orf19Q8IY42 314 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CCDC155Q8N6L0 562 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 RETREG2Q8NC44 543 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 DNAJB3Q8WWF6 145 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.7□□□□□ -0.384e-6■■■■□ 19.4
TNFRSF1A-208ENST00000536194 NIFKQ9BYG3 293 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 IL23AQ9NPF7 189 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 SEPT9Q9UHD8 586 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 PCDHA2Q9Y5H9 948 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 GBF1Q92538 1859 aa12.7□□□□□ -0.38
TNFRSF1A-208ENST00000536194 SMIM35A0A1B0GVV1 85 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 DDX11L8A8MPP1 907 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 LAD1O00515 517 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 MED24O75448 989 aa12.69□□□□□ -0.38
TNFRSF1A-208ENST00000536194 CHRNA1P02708 482 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms