RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 NKX3-2P78367 333 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 HHIPL2Q6UWX4 724 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 KCTD1Q719H9 257 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 NECAB2Q7Z6G3 386 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-202ENST00000535689 WFDC3Q8IUB2 231 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 KRTAP1-3Q8IUG1 177 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.43□□□□□ -1.76e-32■□□□□ 8.9
SNHG1-202ENST00000535689 DPF3Q92784 378 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 SCLYQ96I15 445 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 PPP1R16BQ96T49 567 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 SLC38A3Q99624 504 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 TARS2Q9BW92 718 aaKnown RBP4.43□□□□□ -1.7
SNHG1-202ENST00000535689 RNF32Q9H0A6 362 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 EPB41L4BQ9H329 900 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 PCDH12Q9NPG4 1184 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 ADAMTS6Q9UKP5 1117 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 TRPC5Q9UL62 973 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-202ENST00000535689 FAN1Q9Y2M0 1017 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 CASKIN1Q8WXD9 1431 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 UBR1Q8IWV7 1749 aa4.43□□□□□ -1.7
SNHG1-202ENST00000535689 MTUS2Q5JR59 1369 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 SLIT1O75093 1534 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 KDM5AP29375 1690 aaKnown RBP4.42□□□□□ -1.7
SNHG1-202ENST00000535689 CHD2O14647 1828 aaKnown RBP4.42□□□□□ -1.7
SNHG1-202ENST00000535689 A0A087X0B3 334 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 CBX4O00257 560 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 MSCO60682 206 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 KPNA6O60684 536 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 TADA3O75528 432 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 F2P00734 622 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 PDE6AP16499 860 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 SDSP20132 328 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 FPR2P25090 351 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 TACR1P25103 407 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 LSP1P33241 339 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 LSSP48449 732 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 FNTBP49356 437 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 HERVK_113P62684 666 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 YBX1P67809 324 aaKnown RBP4.42□□□□□ -1.7
SNHG1-202ENST00000535689 C21orf62-AS1Q17RA5 79 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 CC2D1AQ6P1N0 951 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-202ENST00000535689 DPP8Q6V1X1 898 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-202ENST00000535689 ETV3LQ6ZN32 361 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 OTOP1Q7RTM1 612 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 FGD2Q7Z6J4 655 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 THNSL2Q86YJ6 484 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 SIRT2Q8IXJ6 389 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 EFHBQ8N7U6 833 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 FBXO15Q8NCQ5 510 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-202ENST00000535689 CALML6Q8TD86 181 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 ALG3Q92685 438 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 TOE1Q96GM8 510 aaKnown RBP4.42□□□□□ -1.7
SNHG1-202ENST00000535689 PLCD4Q9BRC7 762 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 JAM3Q9BX67 310 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 ZNF552Q9H707 407 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-202ENST00000535689 METTL14Q9HCE5 456 aaKnown RBP4.42□□□□□ -1.7
SNHG1-202ENST00000535689 DCP1AQ9NPI6 582 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-202ENST00000535689 KCNH7Q9NS40 1196 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 C19orf73Q9NVV2 129 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 SLC52A1Q9NWF4 448 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 USP36Q9P275 1121 aaKnown RBP4.42□□□□□ -1.7
SNHG1-202ENST00000535689 SRPK3Q9UPE1 567 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 SPEF1Q9Y4P9 236 aa4.42□□□□□ -1.7
SNHG1-202ENST00000535689 PRDM15P57071 1507 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-202ENST00000535689 KANK1Q14678 1352 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 LRRIQ1Q96JM4 1722 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-202ENST00000535689 PTPDC1A2A3K4 754 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 NUDT19A8MXV4 375 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 CKMP06732 381 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 ENO2P09104 434 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-202ENST00000535689 KRT15P19012 456 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 CD40P25942 277 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 EPHA5P54756 1037 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 SESN3P58005 492 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 IRF9Q00978 393 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 HABP4Q5JVS0 413 aaKnown RBP4.41□□□□□ -1.7
SNHG1-202ENST00000535689 GPR158Q5T848 1215 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 BTBD8Q5XKL5 378 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 MBLAC2Q68D91 279 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 TIGD7Q6NT04 549 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-202ENST00000535689 OVCH1Q7RTY7 1134 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 NLRP10Q86W26 655 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 AMIGO3Q86WK7 504 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 SPATS2Q86XZ4 545 aaKnown RBP4.41□□□□□ -1.7
SNHG1-202ENST00000535689 PIP4K2CQ8TBX8 421 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 WDR66Q8TBY9 1149 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 CPA5Q8WXQ8 436 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 SHISA4Q96DD7 197 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 HSPBP1Q9NZL4 362 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 ASH2LQ9UBL3 628 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 EBF1Q9UH73 591 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 ATP8A1Q9Y2Q0 1164 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 COQ6Q9Y2Z9 468 aa4.41□□□□□ -1.7
SNHG1-202ENST00000535689 NKTRP30414 1462 aaKnown RBP4.41□□□□□ -1.7
SNHG1-202ENST00000535689 TMEM2Q9UHN6 1383 aa4.4□□□□□ -1.7
SNHG1-202ENST00000535689 TEX51A0A1B0GUA7 166 aa4.4□□□□□ -1.71
SNHG1-202ENST00000535689 ZC3H12DA2A288 527 aaKnown RBP4.4□□□□□ -1.71
SNHG1-202ENST00000535689 ZNF561-AS1K7EIQ3 104 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms