RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 SAMM50Q9Y512 469 aa18.95■□□□□ 0.62
VPS51-216ENST00000534591 KIAA1217Q5T5P2 1943 aa18.95■□□□□ 0.62
VPS51-216ENST00000534591 PLXNB2O15031 1838 aa18.95■□□□□ 0.62
VPS51-216ENST00000534591 TNRC18O15417 2968 aaPredicted RBP18.95■□□□□ 0.62
VPS51-216ENST00000534591 ASTN1O14525 1302 aa18.95■□□□□ 0.62
VPS51-216ENST00000534591 DNAJC25-GNG10A0A024R161 153 aa18.95■□□□□ 0.62
VPS51-216ENST00000534591 KIF20AO95235 890 aa18.95■□□□□ 0.62
VPS51-216ENST00000534591 CENPPQ6IPU0 288 aa18.95■□□□□ 0.62
VPS51-216ENST00000534591 RINT1Q6NUQ1 792 aa18.95■□□□□ 0.62
VPS51-216ENST00000534591 TTI2Q6NXR4 508 aa18.95■□□□□ 0.62
VPS51-216ENST00000534591 FBXO46Q6PJ61 603 aaPredicted RBP18.95■□□□□ 0.62
VPS51-216ENST00000534591 SMAP1Q8IYB5 467 aaPredicted RBP18.95■□□□□ 0.62
VPS51-216ENST00000534591 PIGOQ8TEQ8 1089 aa18.95■□□□□ 0.62
VPS51-216ENST00000534591 EFCC1Q9HA90 598 aa18.95■□□□□ 0.62
VPS51-216ENST00000534591 IMPACTQ9P2X3 320 aa18.95■□□□□ 0.62
VPS51-216ENST00000534591 MORF4L1Q9UBU8 362 aa18.95■□□□□ 0.62
VPS51-216ENST00000534591 DBR1Q9UK59 544 aaKnown RBP18.95■□□□□ 0.62
VPS51-216ENST00000534591 GAP43P17677 238 aa18.94■□□□□ 0.62
VPS51-216ENST00000534591 PSMC5P62195 406 aa18.94■□□□□ 0.62
VPS51-216ENST00000534591 HERC4Q5GLZ8 1057 aaPredicted RBP18.94■□□□□ 0.62
VPS51-216ENST00000534591 C1orf186Q6ZWK4 172 aa18.94■□□□□ 0.62
VPS51-216ENST00000534591 ZSCAN30Q86W11 494 aa18.94■□□□□ 0.62
VPS51-216ENST00000534591 C4orf19Q8IY42 314 aa18.94■□□□□ 0.62
VPS51-216ENST00000534591 BANK1Q8NDB2 785 aa18.94■□□□□ 0.62
VPS51-216ENST00000534591 ANKRD20A12PQ8NF67 263 aa18.94■□□□□ 0.62
VPS51-216ENST00000534591 THAP9Q9H5L6 903 aa18.94■□□□□ 0.62
VPS51-216ENST00000534591 PCDHA10Q9Y5I2 948 aa18.94■□□□□ 0.62
VPS51-216ENST00000534591 COL4A3BPQ9Y5P4 624 aa18.94■□□□□ 0.62
VPS51-216ENST00000534591 NPHP3-ACAD11A0A0J9YXS1 232 aa18.93■□□□□ 0.62
VPS51-216ENST00000534591 DKC1O60832 514 aaKnown RBP eCLIP18.93■□□□□ 0.62
VPS51-216ENST00000534591 CCNE2O96020 404 aa18.93■□□□□ 0.62
VPS51-216ENST00000534591 MYOCDQ8IZQ8 938 aa18.93■□□□□ 0.62
VPS51-216ENST00000534591 HPS3Q969F9 1004 aa18.93■□□□□ 0.62
VPS51-216ENST00000534591 TRIM47Q96LD4 638 aa18.93■□□□□ 0.62
VPS51-216ENST00000534591 REEP2Q9BRK0 252 aa18.93■□□□□ 0.62
VPS51-216ENST00000534591 RUSC1Q9BVN2 902 aa18.93■□□□□ 0.62
VPS51-216ENST00000534591 JPH1Q9HDC5 661 aaPredicted RBP18.93■□□□□ 0.62
VPS51-216ENST00000534591 WRAP73Q9P2S5 460 aaPredicted RBP18.93■□□□□ 0.62
VPS51-216ENST00000534591 PCDHA2Q9Y5H9 948 aa18.93■□□□□ 0.62
VPS51-216ENST00000534591 MKI67P46013 3256 aaKnown RBP18.93■□□□□ 0.62
VPS51-216ENST00000534591 ARHGEF35A5YM69 484 aa18.92■□□□□ 0.62
VPS51-216ENST00000534591 LRRC10BA6NIK2 292 aa18.92■□□□□ 0.62
VPS51-216ENST00000534591 TBCAO75347 108 aaKnown RBP18.92■□□□□ 0.62
VPS51-216ENST00000534591 TGFB3P10600 412 aa18.92■□□□□ 0.62
VPS51-216ENST00000534591 SLC9A2Q9UBY0 812 aa18.92■□□□□ 0.62
VPS51-216ENST00000534591 LIMA1Q9UHB6 759 aaKnown RBP18.92■□□□□ 0.62
VPS51-216ENST00000534591 PTPN22Q9Y2R2 807 aa18.92■□□□□ 0.62
VPS51-216ENST00000534591 ESPNB1AK53 854 aa18.91■□□□□ 0.62
VPS51-216ENST00000534591 FGFR1OPO95684 399 aaKnown RBP18.91■□□□□ 0.62
VPS51-216ENST00000534591 PSAPP07602 524 aa18.91■□□□□ 0.62
VPS51-216ENST00000534591 GUCY2CP25092 1073 aa18.91■□□□□ 0.62
VPS51-216ENST00000534591 PMS1P54277 932 aaKnown RBP18.91■□□□□ 0.62
VPS51-216ENST00000534591 LRRC63Q05C16 580 aa18.91■□□□□ 0.62
VPS51-216ENST00000534591 FILIP1LQ4L180 1135 aa18.91■□□□□ 0.62
VPS51-216ENST00000534591 HSP90AA4PQ58FG1 418 aa18.91■□□□□ 0.62
VPS51-216ENST00000534591 ANKRD40Q6AI12 368 aa18.91■□□□□ 0.62
VPS51-216ENST00000534591 FAM114A1Q8IWE2 563 aa18.91■□□□□ 0.62
VPS51-216ENST00000534591 ABRAQ8N0Z2 381 aa18.91■□□□□ 0.62
VPS51-216ENST00000534591 NAP1L5Q96NT1 182 aaPredicted RBP18.91■□□□□ 0.62
VPS51-216ENST00000534591 DUSP9Q99956 384 aaKnown RBP18.91■□□□□ 0.62
VPS51-216ENST00000534591 ANKEF1Q9NU02 776 aa18.91■□□□□ 0.62
VPS51-216ENST00000534591 SEL1LQ9UBV2 794 aa18.91■□□□□ 0.62
VPS51-216ENST00000534591 ODF2LQ9ULJ1 636 aa18.91■□□□□ 0.62
VPS51-216ENST00000534591 ZKSCAN5Q9Y2L8 839 aa18.91■□□□□ 0.62
VPS51-216ENST00000534591 A0A1B0GTH6 734 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 TRIM49BA6NDI0 452 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 EEF1GP26641 437 aaKnown RBP18.9■□□□□ 0.62
VPS51-216ENST00000534591 GSDMDP57764 484 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 RAD51AP2Q09MP3 1159 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 TCP11X2Q5H9J9 407 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 WDR78Q5VTH9 848 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 KCNV1Q6PIU1 500 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 APTXQ7Z2E3 356 aaKnown RBP18.9■□□□□ 0.62
VPS51-216ENST00000534591 CCDC186Q7Z3E2 898 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 CSGALNACT2Q8N6G5 542 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 ANKRD13CQ8N6S4 541 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 MORC4Q8TE76 937 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 ATP6V0A1Q93050 837 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 FGD4Q96M96 766 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 TSG101Q99816 390 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 SRRTQ9BXP5 876 aaKnown RBP18.9■□□□□ 0.62
VPS51-216ENST00000534591 SEMA6BQ9H3T3 888 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 ZHX3Q9H4I2 956 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 PTCH2Q9Y6C5 1203 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 KIAA0100Q14667 2235 aaKnown RBP18.9■□□□□ 0.62
VPS51-216ENST00000534591 KCNJ18B7U540 433 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 ZBTB39O15060 712 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 STRNO43815 780 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 COBLO75128 1261 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 FAM13AO94988 1023 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 PGK2P07205 417 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 PSMC4P43686 418 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 SOX10P56693 466 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 CACNB1Q02641 598 aaPredicted RBP18.9■□□□□ 0.62
VPS51-216ENST00000534591 KCNJ12Q14500 433 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 NR1I3Q14994 352 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 SEPT14Q6ZU15 432 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 SFR1Q86XK3 245 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 VSTM4Q8IW00 320 aa18.9■□□□□ 0.62
VPS51-216ENST00000534591 TIPINQ9BVW5 301 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms