RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 KIF5AQ12840 1032 aa20.91■□□□□ 0.94
SMPD1-210ENST00000534405 ANKRD20A2Q5SQ80 823 aa20.91■□□□□ 0.94
SMPD1-210ENST00000534405 ANKRD20A1Q5TYW2 823 aa20.91■□□□□ 0.94
SMPD1-210ENST00000534405 ANKRD20A3Q5VUR7 823 aa20.91■□□□□ 0.94
SMPD1-210ENST00000534405 TBC1D1Q86TI0 1168 aaPredicted RBP20.91■□□□□ 0.94
SMPD1-210ENST00000534405 TBCKQ8TEA7 893 aa20.91■□□□□ 0.94
SMPD1-210ENST00000534405 TBC1D5Q92609 795 aa20.91■□□□□ 0.94
SMPD1-210ENST00000534405 HPS3Q969F9 1004 aa20.91■□□□□ 0.94
SMPD1-210ENST00000534405 RBM12Q9NTZ6 932 aaKnown RBP20.91■□□□□ 0.94
SMPD1-210ENST00000534405 TMEM260Q9NX78 707 aa20.91■□□□□ 0.94
SMPD1-210ENST00000534405 BIN2Q9UBW5 565 aaPredicted RBP20.91■□□□□ 0.94
SMPD1-210ENST00000534405 DPPA5A6NC42 116 aa20.9■□□□□ 0.94
SMPD1-210ENST00000534405 USP17L5A8MUK1 530 aa20.9■□□□□ 0.94
SMPD1-210ENST00000534405 TACC1O75410 805 aa20.9■□□□□ 0.94
SMPD1-210ENST00000534405 PAFAH1B1P43034 410 aa20.9■□□□□ 0.94
SMPD1-210ENST00000534405 PDE4DQ08499 809 aa20.9■□□□□ 0.94
SMPD1-210ENST00000534405 ANKRD40Q6AI12 368 aa20.9■□□□□ 0.94
SMPD1-210ENST00000534405 NEK8Q86SG6 692 aa20.9■□□□□ 0.94
SMPD1-210ENST00000534405 CSGALNACT2Q8N6G5 542 aa20.9■□□□□ 0.94
SMPD1-210ENST00000534405 RBM41Q96IZ5 413 aaKnown RBP20.9■□□□□ 0.94
SMPD1-210ENST00000534405 AK8Q96MA6 479 aa20.9■□□□□ 0.94
SMPD1-210ENST00000534405 ASB3Q9Y575 518 aa20.9■□□□□ 0.94
SMPD1-210ENST00000534405 GUCY2FP51841 1108 aa20.9■□□□□ 0.94
SMPD1-210ENST00000534405 IFI16Q16666 785 aaKnown RBP20.9■□□□□ 0.94
SMPD1-210ENST00000534405 TUBGCP2Q9BSJ2 902 aa20.9■□□□□ 0.94
SMPD1-210ENST00000534405 ZNF287Q9HBT7 754 aa20.9■□□□□ 0.94
SMPD1-210ENST00000534405 EPB41L5Q9HCM4 733 aa20.9■□□□□ 0.94
SMPD1-210ENST00000534405 C6orf50Q9HD87 102 aa20.9■□□□□ 0.94
SMPD1-210ENST00000534405 AGPAT5Q9NUQ2 364 aa20.9■□□□□ 0.94
SMPD1-210ENST00000534405 PHF20L1A8MW92 1017 aa20.89■□□□□ 0.94
SMPD1-210ENST00000534405 PDLIM1O00151 329 aa20.89■□□□□ 0.94
SMPD1-210ENST00000534405 SRGNP10124 158 aa20.89■□□□□ 0.94
SMPD1-210ENST00000534405 IL1R1P14778 569 aa20.89■□□□□ 0.94
SMPD1-210ENST00000534405 CNGA1P29973 690 aa20.89■□□□□ 0.94
SMPD1-210ENST00000534405 ITIH4Q14624 930 aa20.89■□□□□ 0.94
SMPD1-210ENST00000534405 P2RX5Q93086 422 aa20.89■□□□□ 0.94
SMPD1-210ENST00000534405 DHTKD1Q96HY7 919 aaPredicted RBP20.89■□□□□ 0.94
SMPD1-210ENST00000534405 TTYH3Q9C0H2 523 aa20.89■□□□□ 0.94
SMPD1-210ENST00000534405 CUEDC2Q9H467 287 aa20.89■□□□□ 0.94
SMPD1-210ENST00000534405 SWAP70Q9UH65 585 aa20.89■□□□□ 0.94
SMPD1-210ENST00000534405 PCDHGA4Q9Y5G9 962 aa20.89■□□□□ 0.94
SMPD1-210ENST00000534405 H0YGN5 161 aa20.89■□□□□ 0.93
SMPD1-210ENST00000534405 BACH1O14867 736 aa20.89■□□□□ 0.93
SMPD1-210ENST00000534405 ZSCAN9O15535 394 aaPredicted RBP20.89■□□□□ 0.93
SMPD1-210ENST00000534405 HEXIM1O94992 359 aaKnown RBP20.89■□□□□ 0.93
SMPD1-210ENST00000534405 ASIC1P78348 528 aa20.89■□□□□ 0.93
SMPD1-210ENST00000534405 MFSD14BQ5SR56 506 aa20.89■□□□□ 0.93
SMPD1-210ENST00000534405 SMCR8Q8TEV9 937 aaPredicted RBP20.89■□□□□ 0.93
SMPD1-210ENST00000534405 TEKT4Q8WW24 435 aa20.89■□□□□ 0.93
SMPD1-210ENST00000534405 IFT81Q8WYA0 676 aa20.89■□□□□ 0.93
SMPD1-210ENST00000534405 RPGRQ92834 1020 aaKnown RBP20.89■□□□□ 0.93
SMPD1-210ENST00000534405 C7orf25Q9BPX7 421 aa20.89■□□□□ 0.93
SMPD1-210ENST00000534405 FAM167BQ9BTA0 163 aa20.89■□□□□ 0.93
SMPD1-210ENST00000534405 SUDS3Q9H7L9 328 aaPredicted RBP20.89■□□□□ 0.93
SMPD1-210ENST00000534405 SMARCAL1Q9NZC9 954 aa20.89■□□□□ 0.93
SMPD1-210ENST00000534405 CNOT8Q9UFF9 292 aaKnown RBP20.89■□□□□ 0.93
SMPD1-210ENST00000534405 NFS1Q9Y697 457 aa20.89■□□□□ 0.93
SMPD1-210ENST00000534405 LY75O60449 1722 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 LRRD1A4D1F6 860 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 EDIL3O43854 480 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 NQO1P15559 274 aaKnown RBP20.88■□□□□ 0.93
SMPD1-210ENST00000534405 CCNE1P24864 410 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 GNA11P29992 359 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 GUCY2DQ02846 1103 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 SEPT2Q15019 361 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 PPP1R15BQ5SWA1 713 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 AGBL2Q5U5Z8 902 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 NUGGCQ68CJ6 796 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 NFRKBQ6P4R8 1299 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 ANKS4BQ8N8V4 417 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 NHEJ1Q9H9Q4 299 aaPredicted RBP20.88■□□□□ 0.93
SMPD1-210ENST00000534405 LRRC4BQ9NT99 713 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 MAGEC2Q9UBF1 373 aaPredicted RBP20.88■□□□□ 0.93
SMPD1-210ENST00000534405 FRMPD2Q68DX3 1309 aaPredicted RBP20.88■□□□□ 0.93
SMPD1-210ENST00000534405 DNM2P50570 870 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 CUL3Q13618 768 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 KIAA0753Q2KHM9 967 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 RUFY4Q6ZNE9 571 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 KIAA0895Q8NCT3 520 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.88■□□□□ 0.93
SMPD1-210ENST00000534405 CHMP6Q96FZ7 201 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 BICD1Q96G01 975 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 NAF1Q96HR8 494 aaKnown RBP20.88■□□□□ 0.93
SMPD1-210ENST00000534405 PLEKHG4BQ96PX9 1271 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 MAGEF1Q9HAY2 307 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 EXOC1Q9NV70 894 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 WDR35Q9P2L0 1181 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 CAPN6Q9Y6Q1 641 aa20.88■□□□□ 0.93
SMPD1-210ENST00000534405 TULP1O00294 542 aaPredicted RBP20.87■□□□□ 0.93
SMPD1-210ENST00000534405 VIMP08670 466 aaKnown RBP20.87■□□□□ 0.93
SMPD1-210ENST00000534405 NOVP48745 357 aa20.87■□□□□ 0.93
SMPD1-210ENST00000534405 CRY2Q49AN0 593 aa20.87■□□□□ 0.93
SMPD1-210ENST00000534405 CASKIN2Q8WXE0 1202 aa20.87■□□□□ 0.93
SMPD1-210ENST00000534405 CNOT6LQ96LI5 555 aaKnown RBP20.87■□□□□ 0.93
SMPD1-210ENST00000534405 EHD2Q9NZN4 543 aa20.87■□□□□ 0.93
SMPD1-210ENST00000534405 POLLQ9UGP5 575 aa20.87■□□□□ 0.93
SMPD1-210ENST00000534405 SEC63Q9UGP8 760 aaKnown RBP20.87■□□□□ 0.93
SMPD1-210ENST00000534405 GGA1Q9UJY5 639 aa20.87■□□□□ 0.93
SMPD1-210ENST00000534405 ALDH3A1P30838 453 aa20.87■□□□□ 0.93
SMPD1-210ENST00000534405 LRRC23Q53EV4 343 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms