RNA–Protein interactions for RNA: ENST00000534093.5

ROM1-205, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ROM1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-205ENST00000534093 RASIP1Q5U651 963 aa14.29□□□□□ -0.12
ROM1-205ENST00000534093 TAF2Q6P1X5 1199 aa14.29□□□□□ -0.12
ROM1-205ENST00000534093 OTOP2Q7RTS6 562 aa14.29□□□□□ -0.12
ROM1-205ENST00000534093 ZBTB10Q96DT7 871 aa14.29□□□□□ -0.12
ROM1-205ENST00000534093 FTOQ9C0B1 505 aaKnown RBP eCLIP14.29□□□□□ -0.12
ROM1-205ENST00000534093 VAV3Q9UKW4 847 aa14.29□□□□□ -0.12
ROM1-205ENST00000534093 SMC3Q9UQE7 1217 aa14.29□□□□□ -0.12
ROM1-205ENST00000534093 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.29□□□□□ -0.12
ROM1-205ENST00000534093 IGSF9BQ9UPX0 1349 aa14.29□□□□□ -0.12
ROM1-205ENST00000534093 KIF28PB7ZC32 967 aa14.28□□□□□ -0.12
ROM1-205ENST00000534093 ZNF862O60290 1169 aa14.28□□□□□ -0.12
ROM1-205ENST00000534093 BAG4O95429 457 aaKnown RBP14.28□□□□□ -0.12
ROM1-205ENST00000534093 CXCL10P02778 98 aa14.28□□□□□ -0.12
ROM1-205ENST00000534093 COL1A2P08123 1366 aa14.28□□□□□ -0.12
ROM1-205ENST00000534093 CTSHP09668 335 aa14.28□□□□□ -0.12
ROM1-205ENST00000534093 ATP2B1P20020 1258 aa14.28□□□□□ -0.12
ROM1-205ENST00000534093 PPP2R5CQ13362 524 aa14.28□□□□□ -0.12
ROM1-205ENST00000534093 CUL4AQ13619 759 aa14.28□□□□□ -0.12
ROM1-205ENST00000534093 MBTPS1Q14703 1052 aa14.28□□□□□ -0.12
ROM1-205ENST00000534093 UGCGQ16739 394 aa14.28□□□□□ -0.12
ROM1-205ENST00000534093 ZNF484Q5JVG2 852 aa14.28□□□□□ -0.12
ROM1-205ENST00000534093 TRMT1LQ7Z2T5 733 aaKnown RBP14.28□□□□□ -0.12
ROM1-205ENST00000534093 RPAINQ86UA6 219 aa14.28□□□□□ -0.12
ROM1-205ENST00000534093 NOSTRINQ8IVI9 506 aa14.28□□□□□ -0.12
ROM1-205ENST00000534093 SLFN12Q8IYM2 578 aa14.28□□□□□ -0.12
ROM1-205ENST00000534093 BBXQ8WY36 941 aaPredicted RBP14.28□□□□□ -0.12
ROM1-205ENST00000534093 EVPLQ92817 2033 aa14.28□□□□□ -0.12
ROM1-205ENST00000534093 MTIF3Q9H2K0 278 aaKnown RBP14.28□□□□□ -0.12
ROM1-205ENST00000534093 CXXC1Q9P0U4 656 aaPredicted RBP14.28□□□□□ -0.12
ROM1-205ENST00000534093 LAMA3Q16787 3333 aa14.27□□□□□ -0.12
ROM1-205ENST00000534093 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.27□□□□□ -0.13
ROM1-205ENST00000534093 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.27□□□□□ -0.13
ROM1-205ENST00000534093 ZBTB42B2RXF5 422 aa14.27□□□□□ -0.13
ROM1-205ENST00000534093 RBAK-RBAKDNI3L0D1 243 aa14.27□□□□□ -0.13
ROM1-205ENST00000534093 EML1O00423 815 aa14.27□□□□□ -0.13
ROM1-205ENST00000534093 NEMFO60524 1076 aa14.27□□□□□ -0.13
ROM1-205ENST00000534093 ACTN1P12814 892 aa14.27□□□□□ -0.13
ROM1-205ENST00000534093 U2AF2P26368 475 aaKnown RBP eCLIP14.27□□□□□ -0.13
ROM1-205ENST00000534093 KLRC1P26715 233 aa14.27□□□□□ -0.13
ROM1-205ENST00000534093 CALCRLQ16602 461 aa14.27□□□□□ -0.13
ROM1-205ENST00000534093 FAM26DQ5JW98 314 aa14.27□□□□□ -0.13
ROM1-205ENST00000534093 MTHFD1LQ6UB35 978 aa14.27□□□□□ -0.13
ROM1-205ENST00000534093 RSPH3Q86UC2 560 aa14.27□□□□□ -0.13
ROM1-205ENST00000534093 DNAJB3Q8WWF6 145 aa14.27□□□□□ -0.13
ROM1-205ENST00000534093 FAM167AQ96KS9 214 aa14.27□□□□□ -0.13
ROM1-205ENST00000534093 PCDHA2Q9Y5H9 948 aa14.27□□□□□ -0.13
ROM1-205ENST00000534093 LAMA2P24043 3122 aaKnown RBP14.26□□□□□ -0.13
ROM1-205ENST00000534093 ZBBXA8MT70 800 aa14.26□□□□□ -0.13
ROM1-205ENST00000534093 CHRNA1P02708 482 aa14.26□□□□□ -0.13
ROM1-205ENST00000534093 OATP04181 439 aa14.26□□□□□ -0.13
ROM1-205ENST00000534093 MCM7P33993 719 aa14.26□□□□□ -0.13
ROM1-205ENST00000534093 SMAD3P84022 425 aaKnown RBP14.26□□□□□ -0.13
ROM1-205ENST00000534093 PRKCEQ02156 737 aa14.26□□□□□ -0.13
ROM1-205ENST00000534093 FAM109BQ6ICB4 259 aaPredicted RBP14.26□□□□□ -0.13
ROM1-205ENST00000534093 CNKSR3Q6P9H4 555 aa14.26□□□□□ -0.13
ROM1-205ENST00000534093 MTMR9Q96QG7 549 aa14.26□□□□□ -0.13
ROM1-205ENST00000534093 FAM49AQ9H0Q0 323 aaPredicted RBP14.26□□□□□ -0.13
ROM1-205ENST00000534093 NRBP2Q9NSY0 501 aa14.26□□□□□ -0.13
ROM1-205ENST00000534093 CEP131Q9UPN4 1083 aa14.26□□□□□ -0.13
ROM1-205ENST00000534093 SMIM35A0A1B0GVV1 85 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 H3BQV1 296 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 RPLP2P05387 115 aaKnown RBP14.25□□□□□ -0.13
ROM1-205ENST00000534093 TRAPPC10P48553 1259 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 SPIRE1Q08AE8 756 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 MGAT3Q09327 533 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 EPHA7Q15375 998 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 ZNF174Q15697 407 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 TCTN1Q2MV58 587 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 TTC38Q5R3I4 469 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 MCTP1Q6DN14 999 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 NCAPH2Q6IBW4 605 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 GPR153Q6NV75 609 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 BANK1Q8NDB2 785 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 OSBPL7Q9BZF2 842 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 TMEM60Q9H2L4 133 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 NOL7Q9UMY1 257 aaKnown RBP14.25□□□□□ -0.13
ROM1-205ENST00000534093 PCDHA12Q9UN75 941 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 CDY2AQ9Y6F7 541 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 SLC4A7Q9Y6M7 1214 aa14.25□□□□□ -0.13
ROM1-205ENST00000534093 LOXHD1Q8IVV2 1947 aa14.24□□□□□ -0.13
ROM1-205ENST00000534093 GRXCR1A8MXD5 290 aa14.24□□□□□ -0.13
ROM1-205ENST00000534093 BAIAP3O94812 1187 aa14.24□□□□□ -0.13
ROM1-205ENST00000534093 STBD1O95210 358 aa14.24□□□□□ -0.13
ROM1-205ENST00000534093 C22orf31O95567 290 aa14.24□□□□□ -0.13
ROM1-205ENST00000534093 TXKP42681 527 aa14.24□□□□□ -0.13
ROM1-205ENST00000534093 PSMC5P62195 406 aa14.24□□□□□ -0.13
ROM1-205ENST00000534093 MRPS6P82932 125 aaKnown RBP14.24□□□□□ -0.13
ROM1-205ENST00000534093 ORC2Q13416 577 aaPredicted RBP14.24□□□□□ -0.13
ROM1-205ENST00000534093 PLEKHG4Q58EX7 1191 aa14.24□□□□□ -0.13
ROM1-205ENST00000534093 XKR3Q5GH77 459 aa14.24□□□□□ -0.13
ROM1-205ENST00000534093 LARP1BQ659C4 914 aaKnown RBP14.24□□□□□ -0.13
ROM1-205ENST00000534093 NME8Q8N427 588 aa14.24□□□□□ -0.13
ROM1-205ENST00000534093 DBF4BQ8NFT6 615 aa14.24□□□□□ -0.13
ROM1-205ENST00000534093 TTC12Q9H892 705 aaPredicted RBP14.24□□□□□ -0.13
ROM1-205ENST00000534093 SIP14410 1827 aa14.24□□□□□ -0.13
ROM1-205ENST00000534093 ABHD14A-ACY1A0A1B0GW23 586 aa14.23□□□□□ -0.13
ROM1-205ENST00000534093 DDX11L8A8MPP1 907 aa14.23□□□□□ -0.13
ROM1-205ENST00000534093 K7ELQ4 463 aaPredicted RBP14.23□□□□□ -0.13
ROM1-205ENST00000534093 MAGEB2O15479 319 aa14.23□□□□□ -0.13
ROM1-205ENST00000534093 DKC1O60832 514 aaKnown RBP eCLIP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms