RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 MRVI1Q9Y6F6 885 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 LCTP09848 1927 aa12.25□□□□□ -0.45
CCDC90B-218ENST00000533761 GAS7O60861 476 aa12.25□□□□□ -0.45
CCDC90B-218ENST00000533761 SEMA3FQ13275 785 aa12.25□□□□□ -0.45
CCDC90B-218ENST00000533761 POSTNQ15063 836 aa12.25□□□□□ -0.45
CCDC90B-218ENST00000533761 STX1AQ16623 288 aa12.25□□□□□ -0.45
CCDC90B-218ENST00000533761 LRCH2Q5VUJ6 765 aa12.25□□□□□ -0.45
CCDC90B-218ENST00000533761 CKAP2LQ8IYA6 745 aa12.25□□□□□ -0.45
CCDC90B-218ENST00000533761 HAS1Q92839 578 aa12.25□□□□□ -0.45
CCDC90B-218ENST00000533761 CCDC47Q96A33 483 aaKnown RBP12.25□□□□□ -0.45
CCDC90B-218ENST00000533761 GPRASP2Q96D09 838 aa12.25□□□□□ -0.45
CCDC90B-218ENST00000533761 GTPBP4Q9BZE4 634 aaKnown RBP12.25□□□□□ -0.45
CCDC90B-218ENST00000533761 VTA1Q9NP79 307 aa12.25□□□□□ -0.45
CCDC90B-218ENST00000533761 TBC1D22BQ9NU19 505 aa12.25□□□□□ -0.45
CCDC90B-218ENST00000533761 ANO10Q9NW15 660 aa12.25□□□□□ -0.45
CCDC90B-218ENST00000533761 IGLV3-22A0A075B6J6 115 aa12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 IPO5O00410 1097 aaKnown RBP12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 MSH4O15457 936 aa12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 MRE11P49959 708 aa12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 MRPS9P82933 396 aaKnown RBP12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 ACVR2BQ13705 512 aa12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 IL17AQ16552 155 aa12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 LONRF3Q496Y0 759 aa12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 KCNV1Q6PIU1 500 aa12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 EEPD1Q7L9B9 569 aa12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 IL31RAQ8NI17 732 aa12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 SNX29Q8TEQ0 813 aa12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 LENG9Q96B70 501 aa12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 TEKT3Q9BXF9 490 aa12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 JADE2Q9NQC1 790 aa12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 RMND1Q9NWS8 449 aa12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 DACH1Q9UI36 760 aa12.24□□□□□ -0.45
CCDC90B-218ENST00000533761 TGFB3P10600 412 aa12.23□□□□□ -0.45
CCDC90B-218ENST00000533761 MUTP22033 750 aa12.23□□□□□ -0.45
CCDC90B-218ENST00000533761 CACNB2Q08289 660 aaPredicted RBP12.23□□□□□ -0.45
CCDC90B-218ENST00000533761 KARSQ15046 597 aaKnown RBP12.23□□□□□ -0.45
CCDC90B-218ENST00000533761 SEPT14Q6ZU15 432 aa12.23□□□□□ -0.45
CCDC90B-218ENST00000533761 NUDT18Q6ZVK8 323 aa12.23□□□□□ -0.45
CCDC90B-218ENST00000533761 TRIML1Q8N9V2 468 aa12.23□□□□□ -0.45
CCDC90B-218ENST00000533761 NEK9Q8TD19 979 aa12.23□□□□□ -0.45
CCDC90B-218ENST00000533761 SCFD2Q8WU76 684 aa12.23□□□□□ -0.45
CCDC90B-218ENST00000533761 SLC5A5Q92911 643 aa12.23□□□□□ -0.45
CCDC90B-218ENST00000533761 SMARCE1Q969G3 411 aa12.23□□□□□ -0.45
CCDC90B-218ENST00000533761 INPP4AQ96PE3 977 aaPredicted RBP12.23□□□□□ -0.45
CCDC90B-218ENST00000533761 ZHX1Q9UKY1 873 aaPredicted RBP12.23□□□□□ -0.45
CCDC90B-218ENST00000533761 MCM3APO60318 1980 aa12.23□□□□□ -0.45
CCDC90B-218ENST00000533761 ACTN4O43707 911 aaKnown RBP12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 GTPBP6O43824 516 aaPredicted RBP12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 INHAP05111 366 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 ITGB5P18084 799 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 CCT6AP40227 531 aaKnown RBP12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 TYRO3Q06418 890 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 PPP2R5CQ13362 524 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 PRAMEF19Q5SWL8 479 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 MAP3K21Q5TCX8 1036 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 IQSEC1Q6DN90 963 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 USP49Q70CQ1 688 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 FBXO16Q8IX29 292 aaPredicted RBP12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 SH3TC2Q8TF17 1288 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 GSDMAQ96QA5 445 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 PANK2Q9BZ23 570 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 HMX1Q9NP08 348 aaPredicted RBP12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 KCNH7Q9NS40 1196 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 SERTAD1Q9UHV2 236 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 UBIAD1Q9Y5Z9 338 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 EDIL3O43854 480 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 ZNF865P0CJ78 1059 aaPredicted RBP12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 CYBAP13498 195 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 CNGA1P29973 690 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 SFNP31947 248 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 TTLL4Q14679 1199 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 E2F4Q16254 413 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 CCDC144BQ3MJ40 725 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 NCAPH2Q6IBW4 605 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 TAPT1Q6NXT6 567 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 GIMAP8Q8ND71 665 aaPredicted RBP12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 KATNBL1Q9H079 304 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 FAM184BQ9ULE4 1060 aa12.22□□□□□ -0.45
CCDC90B-218ENST00000533761 HTTP42858 3142 aa12.21□□□□□ -0.45
CCDC90B-218ENST00000533761 CENPFP49454 3210 aa12.21□□□□□ -0.45
CCDC90B-218ENST00000533761 RBM47A0AV96 593 aaKnown RBP12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 SPATA31C2B4DYI2 1134 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 SEPT4O43236 478 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 MSCO60682 206 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 DKC1O60832 514 aaKnown RBP eCLIP12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 TXNP10599 105 aaKnown RBP12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 AKR1A1P14550 325 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 PLCG1P19174 1290 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 RPA1P27694 616 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 ICAM3P32942 547 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 JAK3P52333 1124 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 KRT76Q01546 638 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 TRIM32Q13049 653 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 HYIQ5T013 277 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 SV2BQ7L1I2 683 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 RDM1Q8NG50 284 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 CYP2W1Q8TAV3 490 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 FAM200AQ8TCP9 573 aa12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 LARP4BQ92615 738 aaKnown RBP12.21□□□□□ -0.46
CCDC90B-218ENST00000533761 PAGE5Q96GU1 130 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms