RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 GRAPQ13588 217 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 THOC5Q13769 683 aaKnown RBP7.53□□□□□ -1.2
CTNND1-236ENST00000533667 KIF22Q14807 665 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 FAM47CQ5HY64 1035 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 TMEM179Q6ZVK1 233 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 ZNF280CQ8ND82 737 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 GRAPLQ8TC17 118 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-236ENST00000533667 DHX38Q92620 1227 aaKnown RBP7.53□□□□□ -1.2
CTNND1-236ENST00000533667 COA7Q96BR5 231 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 EEF2KMTQ96G04 330 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 INO80BQ9C086 356 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-236ENST00000533667 PLEKHG2Q9H7P9 1386 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 NPHP4O75161 1426 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-236ENST00000533667 SPDYE16A6NNV3 312 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-236ENST00000533667 SERPINB2P05120 415 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 ATP1A3P13637 1013 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 CDK8P49336 464 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 MECOMQ03112 1051 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 SNX1Q13596 522 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 SPARCL1Q14515 664 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 SPDYE2Q495Y8 402 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 ERFEQ4G0M1 354 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 FMR1NBQ8N0W7 255 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-236ENST00000533667 DNAAF3Q8N9W5 541 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 TTLL11Q8NHH1 800 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 PYROXD1Q8WU10 500 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 NUDCD1Q96RS6 583 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 SEC31BQ9NQW1 1179 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 ITGB1BP2Q9UKP3 347 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 ANGPTL3Q9Y5C1 460 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 CDHR2Q9BYE9 1310 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 UGGT1Q9NYU2 1555 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 ESYT2A0FGR8 921 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 MYO1CO00159 1063 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 COBLO75128 1261 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 SAT1P21673 171 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 CXCR5P32302 372 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 TERF2Q15554 542 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 DIXDC1Q155Q3 683 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 LCA5Q86VQ0 697 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 DDX17Q92841 729 aaKnown RBP7.53□□□□□ -1.2
CTNND1-236ENST00000533667 FAM149B1Q96BN6 582 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 FAM20AQ96MK3 541 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 ZC4H2Q9NQZ6 224 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 SEL1LQ9UBV2 794 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 TMEM94Q12767 1356 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 GOLGA8SH3BPF8 625 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 ESRRAP11474 423 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-236ENST00000533667 KCNJ6P48051 423 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 CYP27A1Q02318 531 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 PDE1CQ14123 709 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-236ENST00000533667 TFDP2Q14188 446 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 TSGA10IPQ3SY00 556 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 TBC1D9BQ66K14 1250 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 USP17L2Q6R6M4 530 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 ZNF710Q8N1W2 664 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 MCPH1Q8NEM0 835 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.53□□□□□ -1.23e-6■■■■■ 50.8
CTNND1-236ENST00000533667 PDLIM2Q96JY6 352 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 TRIM15Q9C019 465 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 ADAMTS1Q9UHI8 967 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 AKT3Q9Y243 479 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 ADCY10Q96PN6 1610 aa7.53□□□□□ -1.2
CTNND1-236ENST00000533667 PREX2Q70Z35 1606 aa7.52□□□□□ -1.2
CTNND1-236ENST00000533667 A0A1W2PQC6 194 aa7.52□□□□□ -1.2
CTNND1-236ENST00000533667 ECM2O94769 699 aaPredicted RBP7.52□□□□□ -1.2
CTNND1-236ENST00000533667 FGGP02679 453 aa7.52□□□□□ -1.2
CTNND1-236ENST00000533667 CA4P22748 312 aa7.52□□□□□ -1.2
CTNND1-236ENST00000533667 ARL4CP56559 192 aa7.52□□□□□ -1.2
CTNND1-236ENST00000533667 MAP3K7CLP57077 242 aa7.52□□□□□ -1.2
CTNND1-236ENST00000533667 TFAMQ00059 246 aaKnown RBP7.52□□□□□ -1.2
CTNND1-236ENST00000533667 IQCB1Q15051 598 aa7.52□□□□□ -1.2
CTNND1-236ENST00000533667 ARL13BQ3SXY8 428 aa7.52□□□□□ -1.2
CTNND1-236ENST00000533667 CC2D1AQ6P1N0 951 aaPredicted RBP7.52□□□□□ -1.2
CTNND1-236ENST00000533667 RSRC2Q7L4I2 434 aaKnown RBP7.52□□□□□ -1.2
CTNND1-236ENST00000533667 CCNYQ8ND76 341 aa7.52□□□□□ -1.2
CTNND1-236ENST00000533667 SPDL1Q96EA4 605 aa7.52□□□□□ -1.2
CTNND1-236ENST00000533667 TSC22D3Q99576 134 aa7.52□□□□□ -1.2
CTNND1-236ENST00000533667 KLC2Q9H0B6 622 aa7.52□□□□□ -1.2
CTNND1-236ENST00000533667 PCIF1Q9H4Z3 704 aa7.52□□□□□ -1.2
CTNND1-236ENST00000533667 LRRC4Q9HBW1 653 aa7.52□□□□□ -1.2
CTNND1-236ENST00000533667 TET3O43151 1660 aa7.52□□□□□ -1.2
CTNND1-236ENST00000533667 CFAP65Q6ZU64 1925 aaKnown RBP7.52□□□□□ -1.21
CTNND1-236ENST00000533667 REREQ9P2R6 1566 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 SPECC1L-ADORA2AF8WAN1 911 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 FOXP2O15409 715 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 ZBED1O96006 694 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 USP17L8P0C7I0 530 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 CACNB1Q02641 598 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-236ENST00000533667 TAF11Q15544 211 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 HIBCHQ6NVY1 386 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-236ENST00000533667 KLC3Q6P597 504 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 SESTD1Q86VW0 696 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 RNF169Q8NCN4 708 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 PPWD1Q96BP3 646 aaKnown RBP7.52□□□□□ -1.21
CTNND1-236ENST00000533667 FAM167AQ96KS9 214 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 CALN1Q9BXU9 219 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 TMEM60Q9H2L4 133 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 MRPL40Q9NQ50 206 aaKnown RBP7.52□□□□□ -1.21
CTNND1-236ENST00000533667 NOP53Q9NZM5 478 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms