RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 DHX9Q08211 1270 aaKnown RBP13.25□□□□□ -0.29
BDNF-218ENST00000533246 MCF2L2Q86YR7 1114 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 KLHL23Q8NBE8 558 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 WDR11Q9BZH6 1224 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 NXF1Q9UBU9 619 aaKnown RBP13.25□□□□□ -0.29
BDNF-218ENST00000533246 PXDNQ92626 1479 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 ATP1A1P05023 1023 aaKnown RBP13.25□□□□□ -0.29
BDNF-218ENST00000533246 ATP2A2P16615 1042 aaKnown RBP13.25□□□□□ -0.29
BDNF-218ENST00000533246 CD58P19256 250 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 PTPAQ15257 358 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 SNCBQ16143 134 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 FUCA2Q9BTY2 467 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 SH3GLB2Q9NR46 395 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 ADD3Q9UEY8 706 aaKnown RBP13.25□□□□□ -0.29
BDNF-218ENST00000533246 DAAM1Q9Y4D1 1078 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 SERPING1P05155 500 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 FERP16591 822 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 KLK7P49862 253 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 CASP7P55210 303 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 MASTLQ96GX5 879 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 RAVER2Q9HCJ3 691 aaKnown RBP13.25□□□□□ -0.29
BDNF-218ENST00000533246 ZNF277Q9NRM2 450 aaPredicted RBP13.25□□□□□ -0.29
BDNF-218ENST00000533246 SMARCAL1Q9NZC9 954 aa13.25□□□□□ -0.29
BDNF-218ENST00000533246 RASA1P20936 1047 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 MARK3P27448 753 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 CORO7P57737 925 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 PTK2Q05397 1052 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 ZNF211Q13398 564 aaPredicted RBP13.24□□□□□ -0.29
BDNF-218ENST00000533246 INTS5Q6P9B9 1019 aaKnown RBP13.24□□□□□ -0.29
BDNF-218ENST00000533246 C3orf67Q6ZVT6 689 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 RNF34Q969K3 372 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 MEGF6O75095 1541 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 TPP2P29144 1249 aaPredicted RBP13.24□□□□□ -0.29
BDNF-218ENST00000533246 IFT88Q13099 833 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 TRIM74Q86UV6 250 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 TRIM73Q86UV7 250 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.24□□□□□ -0.29
BDNF-218ENST00000533246 CCDC89Q8N998 374 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 RAD54LQ92698 747 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 DYDC2Q96IM9 177 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 TSNARE1Q96NA8 513 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 TSC22D3Q99576 134 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 MTMR4Q9NYA4 1195 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 SYNJ2BP-COX16A0A087WUM0 186 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 DYTNA2CJ06 578 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 PGRMC1O00264 195 aaKnown RBP13.24□□□□□ -0.29
BDNF-218ENST00000533246 DAPK3O43293 454 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 TFAMQ00059 246 aaKnown RBP13.24□□□□□ -0.29
BDNF-218ENST00000533246 RASGRP2Q7LDG7 609 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 SLC7A3Q8WY07 619 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 MTA3Q9BTC8 594 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 APOL6Q9BWW8 343 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 COX16Q9P0S2 106 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 TBK1Q9UHD2 729 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 DNAJC12Q9UKB3 198 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 STK38LQ9Y2H1 464 aa13.24□□□□□ -0.29
BDNF-218ENST00000533246 POC1B-GALNT4F8VUJ3 575 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 TMEM191BP0C7N4 346 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 STX2P32856 288 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 PCK1P35558 622 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 POLE2P56282 527 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 DPYDQ12882 1025 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 CAPRIN2Q6IMN6 1127 aaKnown RBP13.23□□□□□ -0.29
BDNF-218ENST00000533246 FBXO33Q7Z6M2 555 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 ZBTB33Q86T24 672 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 SESTD1Q86VW0 696 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 PCDHB4Q9Y5E5 795 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 BZW2Q9Y6E2 419 aaKnown RBP13.23□□□□□ -0.29
BDNF-218ENST00000533246 FLT1P17948 1338 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 THAP12O43422 761 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 ECE2O60344 883 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 FGGP02679 453 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 NR3C1P04150 777 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 YARSP54577 528 aaKnown RBP13.23□□□□□ -0.29
BDNF-218ENST00000533246 VSNL1P62760 191 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 LACTBP83111 547 aaPredicted RBP13.23□□□□□ -0.29
BDNF-218ENST00000533246 SPP2Q13103 211 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 MAP7D1Q3KQU3 841 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 APBB1IPQ7Z5R6 666 aaPredicted RBP13.23□□□□□ -0.29
BDNF-218ENST00000533246 SUGP1Q8IWZ8 645 aaKnown RBP13.23□□□□□ -0.29
BDNF-218ENST00000533246 SRGAP2CP0DJJ0 459 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 LMNB1P20700 586 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 DYNLT1P63172 113 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 MKRN4PQ13434 485 aaPredicted RBP13.23□□□□□ -0.29
BDNF-218ENST00000533246 MTMR3Q13615 1198 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 DCAF15Q66K64 600 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 CEP128Q6ZU80 1094 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 PODNQ7Z5L7 613 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 A0A1B0GTH6 734 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 MYMKA6NI61 221 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 ATP8B1O43520 1251 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 PIK3CAP42336 1068 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 ZNF131P52739 623 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 RCAN1P53805 252 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 MKRN3Q13064 507 aaKnown RBP13.23□□□□□ -0.29
BDNF-218ENST00000533246 EARS2Q5JPH6 523 aaKnown RBP13.23□□□□□ -0.29
BDNF-218ENST00000533246 C6orf163Q5TEZ5 329 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 TRIM7Q9C029 511 aa13.23□□□□□ -0.29
BDNF-218ENST00000533246 DDX47Q9H0S4 455 aaKnown RBP13.23□□□□□ -0.29
BDNF-218ENST00000533246 TADA3O75528 432 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms