RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 MFSD5Q6N075 450 aa13.47□□□□□ -0.25
SSBP3-214ENST00000533209 RUFY4Q6ZNE9 571 aa13.47□□□□□ -0.25
SSBP3-214ENST00000533209 TRMT1LQ7Z2T5 733 aaKnown RBP13.47□□□□□ -0.25
SSBP3-214ENST00000533209 CAGE1Q8TC20 777 aa13.47□□□□□ -0.25
SSBP3-214ENST00000533209 BBXQ8WY36 941 aaPredicted RBP13.47□□□□□ -0.25
SSBP3-214ENST00000533209 ZBTB10Q96DT7 871 aa13.47□□□□□ -0.25
SSBP3-214ENST00000533209 FAM167AQ96KS9 214 aa13.47□□□□□ -0.25
SSBP3-214ENST00000533209 LBHD1Q9BQE6 289 aaPredicted RBP13.47□□□□□ -0.25
SSBP3-214ENST00000533209 PRO3102Q9H379 93 aa13.47□□□□□ -0.25
SSBP3-214ENST00000533209 RGL1Q9NZL6 768 aa13.47□□□□□ -0.25
SSBP3-214ENST00000533209 WRAP73Q9P2S5 460 aaPredicted RBP13.47□□□□□ -0.25
SSBP3-214ENST00000533209 TUBE1Q9UJT0 475 aa13.47□□□□□ -0.25
SSBP3-214ENST00000533209 LAD1O00515 517 aa13.46□□□□□ -0.25
SSBP3-214ENST00000533209 PITPNM1O00562 1244 aa13.46□□□□□ -0.25
SSBP3-214ENST00000533209 CKBP12277 381 aa13.46□□□□□ -0.25
SSBP3-214ENST00000533209 PDIA4P13667 645 aaKnown RBP13.46□□□□□ -0.25
SSBP3-214ENST00000533209 PRPHP41219 470 aa13.46□□□□□ -0.25
SSBP3-214ENST00000533209 QARSP47897 775 aaKnown RBP13.46□□□□□ -0.25
SSBP3-214ENST00000533209 FXR2P51116 673 aaKnown RBP eCLIP13.46□□□□□ -0.258e-6■■■■□ 21.8
SSBP3-214ENST00000533209 CCL23P55773 120 aa13.46□□□□□ -0.25
SSBP3-214ENST00000533209 ATP2C1P98194 919 aaPredicted RBP13.46□□□□□ -0.25
SSBP3-214ENST00000533209 IL17AQ16552 155 aa13.46□□□□□ -0.25
SSBP3-214ENST00000533209 XKR3Q5GH77 459 aa13.46□□□□□ -0.25
SSBP3-214ENST00000533209 FAM173BQ6P4H8 233 aa13.46□□□□□ -0.25
SSBP3-214ENST00000533209 TRAF7Q6Q0C0 670 aa13.46□□□□□ -0.25
SSBP3-214ENST00000533209 CHRDL2Q6WN34 429 aa13.46□□□□□ -0.25
SSBP3-214ENST00000533209 CCDC155Q8N6L0 562 aa13.46□□□□□ -0.25
SSBP3-214ENST00000533209 DYDC2Q96IM9 177 aa13.46□□□□□ -0.25
SSBP3-214ENST00000533209 HSD17B14Q9BPX1 270 aa13.46□□□□□ -0.25
SSBP3-214ENST00000533209 EIF2AK1Q9BQI3 630 aaKnown RBP13.46□□□□□ -0.25
SSBP3-214ENST00000533209 ZSCAN16Q9H4T2 348 aaPredicted RBP13.46□□□□□ -0.25
SSBP3-214ENST00000533209 NRBP2Q9NSY0 501 aa13.46□□□□□ -0.25
SSBP3-214ENST00000533209 RANBP2P49792 3224 aaKnown RBP13.46□□□□□ -0.26
SSBP3-214ENST00000533209 LTBP2Q14767 1821 aa13.46□□□□□ -0.26
SSBP3-214ENST00000533209 COL1A2P08123 1366 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 SLITRK3O94933 977 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 C22orf31O95567 290 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 ZSCAN22P10073 491 aaPredicted RBP13.45□□□□□ -0.26
SSBP3-214ENST00000533209 CSF2RAP15509 400 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 KLRC1P26715 233 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 EPHB4P54760 987 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 CYP4A11Q02928 519 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 FPGSQ05932 587 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 PKP1Q13835 747 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 CTTNQ14247 550 aaKnown RBP13.45□□□□□ -0.26
SSBP3-214ENST00000533209 TARBP2Q15633 366 aaKnown RBP13.45□□□□□ -0.26
SSBP3-214ENST00000533209 TMEM266Q2M3C6 531 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 MTHFD1LQ6UB35 978 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 C4orf19Q8IY42 314 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 TMEM199Q8N511 208 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 RETREG2Q8NC44 543 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 NEK9Q8TD19 979 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 VWCEQ96DN2 955 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 SCLYQ96I15 445 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 LXNQ9BS40 222 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 NIFKQ9BYG3 293 aaKnown RBP13.45□□□□□ -0.26
SSBP3-214ENST00000533209 FTOQ9C0B1 505 aaKnown RBP eCLIP13.45□□□□□ -0.26
SSBP3-214ENST00000533209 CLIC4Q9Y696 253 aa13.45□□□□□ -0.26
SSBP3-214ENST00000533209 TMEM150BA6NC51 233 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 DDX11L8A8MPP1 907 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 DKC1O60832 514 aaKnown RBP eCLIP13.44□□□□□ -0.26
SSBP3-214ENST00000533209 IQCF3P0C7M6 154 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 SPATA31C1P0DKV0 1188 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 SELPP16109 830 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 BMP8BP34820 402 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 THPOP40225 353 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 PDIA5Q14554 519 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 GPNMBQ14956 572 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 SF3A1Q15459 793 aaKnown RBP13.44□□□□□ -0.26
SSBP3-214ENST00000533209 ZNF618Q5T7W0 954 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 FOXD4L5Q5VV16 416 aaPredicted RBP13.44□□□□□ -0.26
SSBP3-214ENST00000533209 TAF2Q6P1X5 1199 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 ANO5Q75V66 913 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 C16orf59Q7L2K0 433 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 RPAINQ86UA6 219 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 TPH2Q8IWU9 490 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 IGSF22Q8N9C0 903 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 FOXD4L4Q8WXT5 416 aaPredicted RBP13.44□□□□□ -0.26
SSBP3-214ENST00000533209 CEP89Q96ST8 783 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 ZSWIM4Q9H7M6 989 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 SEPT9Q9UHD8 586 aaPredicted RBP13.44□□□□□ -0.26
SSBP3-214ENST00000533209 CEP131Q9UPN4 1083 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 PCDHA2Q9Y5H9 948 aa13.44□□□□□ -0.26
SSBP3-214ENST00000533209 ZBTB39O15060 712 aa13.43□□□□□ -0.26
SSBP3-214ENST00000533209 CAND2O75155 1236 aa13.43□□□□□ -0.26
SSBP3-214ENST00000533209 MED24O75448 989 aa13.43□□□□□ -0.26
SSBP3-214ENST00000533209 LYPLA2O95372 231 aa13.43□□□□□ -0.26
SSBP3-214ENST00000533209 BMP15O95972 392 aa13.43□□□□□ -0.26
SSBP3-214ENST00000533209 F13A1P00488 732 aa13.43□□□□□ -0.26
SSBP3-214ENST00000533209 PPIGQ13427 754 aaKnown RBP eCLIP13.43□□□□□ -0.26
SSBP3-214ENST00000533209 MBTPS1Q14703 1052 aa13.43□□□□□ -0.26
SSBP3-214ENST00000533209 PTPAQ15257 358 aa13.43□□□□□ -0.26
SSBP3-214ENST00000533209 ARL6IP4Q66PJ3 421 aaKnown RBP13.43□□□□□ -0.26
SSBP3-214ENST00000533209 PLA2G4FQ68DD2 849 aa13.43□□□□□ -0.26
SSBP3-214ENST00000533209 DTHD1Q6ZMT9 781 aa13.43□□□□□ -0.26
SSBP3-214ENST00000533209 LRRC8DQ7L1W4 858 aa13.43□□□□□ -0.26
SSBP3-214ENST00000533209 DNAJB3Q8WWF6 145 aa13.43□□□□□ -0.26
SSBP3-214ENST00000533209 SH2D3AQ9BRG2 576 aa13.43□□□□□ -0.26
SSBP3-214ENST00000533209 POLR3CQ9BUI4 534 aaPredicted RBP13.43□□□□□ -0.26
SSBP3-214ENST00000533209 UBE2OQ9C0C9 1292 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms