RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ANKRD54Q6NXT1 300 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 TSHZ1Q6ZSZ6 1077 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 RALYLQ86SE5 291 aaKnown RBP12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 VSIG10LQ86VR7 867 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 MB21D2Q8IYB1 491 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 CRIPAKQ8N1N5 446 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 KCNG4Q8TDN1 519 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 LMBR1Q8WVP7 490 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 FTHL17Q9BXU8 183 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 KRT23Q9C075 422 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 UBA5Q9GZZ9 404 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 RNF41Q9H4P4 317 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 AAASQ9NRG9 546 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 TTC3P53804 2025 aa12.97□□□□□ -0.33
TRAPPC4-213ENST00000533149 B4E1Z4 1266 aa12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 K7ELQ4 463 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 LMNAP02545 664 aaKnown RBP12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 SP100P23497 879 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 MCM5P33992 734 aa12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 TECP42680 631 aa12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 HSD17B4P51659 736 aa12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 PAN2Q504Q3 1202 aaKnown RBP12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 Q6ZUG5 572 aa12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 ADGRF4Q8IZF3 695 aa12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 RASGRP4Q8TDF6 673 aa12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 CNTNAP3BQ96NU0 1288 aa12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 NECTIN4Q96NY8 510 aa12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 LARP6Q9BRS8 491 aaKnown RBP12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 LRRC2Q9BYS8 371 aa12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 CNTNAP3Q9BZ76 1288 aa12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 CNNM2Q9H8M5 875 aa12.96□□□□□ -0.33
TRAPPC4-213ENST00000533149 MYO15AQ9UKN7 3530 aa12.96□□□□□ -0.34
TRAPPC4-213ENST00000533149 CACNA1BQ00975 2339 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 NEDD4P46934 1319 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 PRC1O43663 620 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 RPLP2P05387 115 aaKnown RBP12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 CCND2P30279 289 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 GHRHRQ02643 423 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 MGAT3Q09327 533 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 KCNC3Q14003 757 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 TOB2Q14106 344 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 NEDD9Q14511 834 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 PGM5Q15124 567 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 QRICH1Q2TAL8 776 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 FBXO47Q5MNV8 452 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 METTL7BQ6UX53 244 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 CYB5R4Q7L1T6 521 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 SAMD3Q8N6K7 520 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 CPVLQ9H3G5 476 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 ZSWIM5Q9P217 1185 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 LRFN2Q9ULH4 789 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 LIMCH1Q9UPQ0 1083 aa12.95□□□□□ -0.34
TRAPPC4-213ENST00000533149 DHX16O60231 1041 aaKnown RBP12.94□□□□□ -0.34
TRAPPC4-213ENST00000533149 PCP11498 1178 aaKnown RBP12.94□□□□□ -0.34
TRAPPC4-213ENST00000533149 ANTXR2P58335 489 aa12.94□□□□□ -0.34
TRAPPC4-213ENST00000533149 FGD1P98174 961 aa12.94□□□□□ -0.34
TRAPPC4-213ENST00000533149 ANKRD1Q15327 319 aa12.94□□□□□ -0.34
TRAPPC4-213ENST00000533149 ANGPT1Q15389 498 aa12.94□□□□□ -0.34
TRAPPC4-213ENST00000533149 GNPTABQ3T906 1256 aa12.94□□□□□ -0.34
TRAPPC4-213ENST00000533149 TPRNQ4KMQ1 711 aa12.94□□□□□ -0.34
TRAPPC4-213ENST00000533149 CES5AQ6NT32 575 aa12.94□□□□□ -0.34
TRAPPC4-213ENST00000533149 SYCE2Q6PIF2 218 aa12.94□□□□□ -0.34
TRAPPC4-213ENST00000533149 CCDC105Q8IYK2 499 aa12.94□□□□□ -0.34
TRAPPC4-213ENST00000533149 KIAA2013Q8IYS2 634 aa12.94□□□□□ -0.34
TRAPPC4-213ENST00000533149 TMX3Q96JJ7 454 aa12.94□□□□□ -0.34
TRAPPC4-213ENST00000533149 GPR20Q99678 358 aa12.94□□□□□ -0.34
TRAPPC4-213ENST00000533149 SQORQ9Y6N5 450 aa12.94□□□□□ -0.34
TRAPPC4-213ENST00000533149 GVINP1Q7Z2Y8 2422 aa12.94□□□□□ -0.34
TRAPPC4-213ENST00000533149 C2CD4DB7Z1M9 353 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 FGF18O76093 207 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 SCG2P13521 617 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 AOC1P19801 751 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 ERVFC1P60507 584 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 ITIH3Q06033 890 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 ASPRV1Q53RT3 343 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 SPOUT1Q5T280 376 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 RUFY4Q6ZNE9 571 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 FAM43BQ6ZT52 329 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 DGKHQ86XP1 1220 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 SPRYD3Q8NCJ5 442 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 FLCNQ8NFG4 579 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 LINC01599Q8WXQ3 324 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 ESR2Q92731 530 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 BRF1Q92994 677 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 ZSCAN31Q96LW9 406 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 RTP3Q9BQQ7 232 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 APOL5Q9BWW9 433 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 AMNQ9BXJ7 453 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 TMEM260Q9NX78 707 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 CDY2AQ9Y6F7 541 aa12.93□□□□□ -0.34
TRAPPC4-213ENST00000533149 FSCN2O14926 492 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 STAM2O75886 525 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 CD52P31358 61 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 UTP14CQ5TAP6 766 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 IER5Q5VY09 327 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 LLGL2Q6P1M3 1020 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 CYFIP1Q7L576 1253 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 RTN4RL1Q86UN2 441 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 TRIM50Q86XT4 487 aa12.92□□□□□ -0.34
TRAPPC4-213ENST00000533149 THNSL1Q8IYQ7 743 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms