RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 TRPV2Q9Y5S1 764 aa16.6■□□□□ 0.25
CDC27-209ENST00000532893 LAMA4Q16363 1823 aa16.6■□□□□ 0.25
CDC27-209ENST00000532893 RIF1Q5UIP0 2472 aaKnown RBP16.59■□□□□ 0.25
CDC27-209ENST00000532893 ERICH2A1L162 156 aa16.59■□□□□ 0.25
CDC27-209ENST00000532893 H0Y858 1186 aa16.59■□□□□ 0.25
CDC27-209ENST00000532893 M0QZ92 97 aa16.59■□□□□ 0.25
CDC27-209ENST00000532893 ITGB5P18084 799 aa16.59■□□□□ 0.25
CDC27-209ENST00000532893 PAK2Q13177 524 aa16.59■□□□□ 0.25
CDC27-209ENST00000532893 WTAPQ15007 396 aa16.59■□□□□ 0.25
CDC27-209ENST00000532893 SPOUT1Q5T280 376 aaKnown RBP16.59■□□□□ 0.25
CDC27-209ENST00000532893 CDHR1Q96JP9 859 aa16.59■□□□□ 0.25
CDC27-209ENST00000532893 IRF2BPLQ9H1B7 796 aa16.59■□□□□ 0.25
CDC27-209ENST00000532893 IL25Q9H293 177 aa16.59■□□□□ 0.25
CDC27-209ENST00000532893 OSBPL3Q9H4L5 887 aa16.59■□□□□ 0.25
CDC27-209ENST00000532893 TLR9Q9NR96 1032 aa16.59■□□□□ 0.25
CDC27-209ENST00000532893 PCDHB12Q9Y5F1 795 aa16.59■□□□□ 0.25
CDC27-209ENST00000532893 SPTBN4Q9H254 2564 aa16.59■□□□□ 0.25
CDC27-209ENST00000532893 PIK3CDO00329 1044 aa16.58■□□□□ 0.24
CDC27-209ENST00000532893 PDGFBP01127 241 aaPredicted RBP16.58■□□□□ 0.24
CDC27-209ENST00000532893 RPLP2P05387 115 aaKnown RBP16.58■□□□□ 0.24
CDC27-209ENST00000532893 ERVFC1P60507 584 aa16.58■□□□□ 0.24
CDC27-209ENST00000532893 PTPN21Q16825 1174 aa16.58■□□□□ 0.24
CDC27-209ENST00000532893 TMEM266Q2M3C6 531 aa16.58■□□□□ 0.24
CDC27-209ENST00000532893 TRAPPC12Q8WVT3 735 aa16.58■□□□□ 0.24
CDC27-209ENST00000532893 NEK1Q96PY6 1258 aa16.58■□□□□ 0.24
CDC27-209ENST00000532893 PCYT2Q99447 389 aa16.58■□□□□ 0.24
CDC27-209ENST00000532893 CELF4Q9BZC1 486 aaKnown RBP16.58■□□□□ 0.24
CDC27-209ENST00000532893 TMX1Q9H3N1 280 aa16.58■□□□□ 0.24
CDC27-209ENST00000532893 PCDHB7Q9Y5E2 793 aa16.58■□□□□ 0.24
CDC27-209ENST00000532893 IGSF9BQ9UPX0 1349 aa16.58■□□□□ 0.24
CDC27-209ENST00000532893 TBKBP1A7MCY6 615 aa16.57■□□□□ 0.24
CDC27-209ENST00000532893 FGF18O76093 207 aa16.57■□□□□ 0.24
CDC27-209ENST00000532893 SP100P23497 879 aaPredicted RBP16.57■□□□□ 0.24
CDC27-209ENST00000532893 UBE3AQ05086 875 aa16.57■□□□□ 0.24
CDC27-209ENST00000532893 NFX1Q12986 1120 aaKnown RBP16.57■□□□□ 0.24
CDC27-209ENST00000532893 DUSP6Q16828 381 aa16.57■□□□□ 0.24
CDC27-209ENST00000532893 CATIPQ7Z7H3 387 aa16.57■□□□□ 0.24
CDC27-209ENST00000532893 ZBTB33Q86T24 672 aa16.57■□□□□ 0.24
CDC27-209ENST00000532893 CHD1LQ86WJ1 897 aa16.57■□□□□ 0.24
CDC27-209ENST00000532893 RRP36Q96EU6 259 aaKnown RBP16.57■□□□□ 0.24
CDC27-209ENST00000532893 APOL5Q9BWW9 433 aa16.57■□□□□ 0.24
CDC27-209ENST00000532893 S1PR5Q9H228 398 aa16.57■□□□□ 0.24
CDC27-209ENST00000532893 AAASQ9NRG9 546 aa16.57■□□□□ 0.24
CDC27-209ENST00000532893 TMEM260Q9NX78 707 aa16.57■□□□□ 0.24
CDC27-209ENST00000532893 TRPC6Q9Y210 931 aa16.57■□□□□ 0.24
CDC27-209ENST00000532893 PCDHA2Q9Y5H9 948 aa16.57■□□□□ 0.24
CDC27-209ENST00000532893 SARSP49591 514 aaKnown RBP16.56■□□□□ 0.24
CDC27-209ENST00000532893 MTMR1Q13613 665 aa16.56■□□□□ 0.24
CDC27-209ENST00000532893 FAM102BQ5T8I3 360 aa16.56■□□□□ 0.24
CDC27-209ENST00000532893 SMC5Q8IY18 1101 aa16.56■□□□□ 0.24
CDC27-209ENST00000532893 THNSL1Q8IYQ7 743 aa16.56■□□□□ 0.24
CDC27-209ENST00000532893 RIPOR3Q96MK2 946 aa16.56■□□□□ 0.24
CDC27-209ENST00000532893 CDCA3Q99618 268 aaPredicted RBP16.56■□□□□ 0.24
CDC27-209ENST00000532893 AZI2Q9H6S1 392 aa16.56■□□□□ 0.24
CDC27-209ENST00000532893 PSTPIP2Q9H939 334 aa16.56■□□□□ 0.24
CDC27-209ENST00000532893 TYW1Q9NV66 732 aaKnown RBP16.56■□□□□ 0.24
CDC27-209ENST00000532893 HCSTQ9UBK5 93 aa16.56■□□□□ 0.24
CDC27-209ENST00000532893 UBIAD1Q9Y5Z9 338 aa16.56■□□□□ 0.24
CDC27-209ENST00000532893 MGEA5O60502 916 aa16.55■□□□□ 0.24
CDC27-209ENST00000532893 CYP21A2P08686 494 aa16.55■□□□□ 0.24
CDC27-209ENST00000532893 TECP42680 631 aa16.55■□□□□ 0.24
CDC27-209ENST00000532893 KRT76Q01546 638 aa16.55■□□□□ 0.24
CDC27-209ENST00000532893 APOBRQ0VD83 1088 aa16.55■□□□□ 0.24
CDC27-209ENST00000532893 SART3Q15020 963 aaKnown RBP16.55■□□□□ 0.24
CDC27-209ENST00000532893 PLCB4Q15147 1175 aa16.55■□□□□ 0.24
CDC27-209ENST00000532893 TNPO1Q92973 898 aaKnown RBP16.55■□□□□ 0.24
CDC27-209ENST00000532893 ADAM2Q99965 735 aa16.55■□□□□ 0.24
CDC27-209ENST00000532893 SPZ1Q9BXG8 430 aa16.55■□□□□ 0.24
CDC27-209ENST00000532893 JADE2Q9NQC1 790 aa16.55■□□□□ 0.24
CDC27-209ENST00000532893 GINS2Q9Y248 185 aa16.55■□□□□ 0.24
CDC27-209ENST00000532893 KMT2EQ8IZD2 1858 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 KIAA1671Q9BY89 1806 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 KDM3AQ9Y4C1 1321 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 FSD2A1L4K1 749 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 FSCN2O14926 492 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 FOXK2Q01167 660 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 NUCB1Q02818 461 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 UBE2SQ16763 222 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 PLPP4Q5VZY2 271 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 PDE12Q6L8Q7 609 aaKnown RBP16.54■□□□□ 0.24
CDC27-209ENST00000532893 ANKRD54Q6NXT1 300 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 LLGL2Q6P1M3 1020 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 SYCE2Q6PIF2 218 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 TMEM184AQ6ZMB5 413 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 ASCL5Q7RTU5 278 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 RALYLQ86SE5 291 aaKnown RBP16.54■□□□□ 0.24
CDC27-209ENST00000532893 NME8Q8N427 588 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 COLGALT1Q8NBJ5 622 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 IGDCC4Q8TDY8 1250 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 MYL10Q9BUA6 226 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 RWDD1Q9H446 243 aaPredicted RBP16.54■□□□□ 0.24
CDC27-209ENST00000532893 CDHR5Q9HBB8 845 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 JPH1Q9HDC5 661 aaPredicted RBP16.54■□□□□ 0.24
CDC27-209ENST00000532893 SLC9A2Q9UBY0 812 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 SEC63Q9UGP8 760 aaKnown RBP16.54■□□□□ 0.24
CDC27-209ENST00000532893 TAF6LQ9Y6J9 622 aa16.54■□□□□ 0.24
CDC27-209ENST00000532893 FAM186AA6NE01 2351 aa16.53■□□□□ 0.24
CDC27-209ENST00000532893 PLXNA4Q9HCM2 1894 aa16.53■□□□□ 0.24
CDC27-209ENST00000532893 SMIM35A0A1B0GVV1 85 aa16.53■□□□□ 0.24
CDC27-209ENST00000532893 DENND3A2RUS2 1198 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms