RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 PDRG1Q9NUG6 133 aa21.52■■□□□ 1.04
SSH3-209ENST00000532600 THEGQ9P2T0 379 aa21.52■■□□□ 1.04
SSH3-209ENST00000532600 INSL6Q9Y581 213 aa21.52■■□□□ 1.04
SSH3-209ENST00000532600 PCDHA2Q9Y5H9 948 aa21.52■■□□□ 1.04
SSH3-209ENST00000532600 COL4A6Q14031 1691 aa21.52■■□□□ 1.04
SSH3-209ENST00000532600 LOXHD1Q8IVV2 1947 aa21.51■■□□□ 1.03
SSH3-209ENST00000532600 M0R2N6 131 aa21.51■■□□□ 1.03
SSH3-209ENST00000532600 EIF5BO60841 1220 aaKnown RBP21.51■■□□□ 1.03
SSH3-209ENST00000532600 DTNBO60941 627 aa21.51■■□□□ 1.03
SSH3-209ENST00000532600 STK3Q13188 491 aa21.51■■□□□ 1.03
SSH3-209ENST00000532600 PRR16Q569H4 304 aa21.51■■□□□ 1.03
SSH3-209ENST00000532600 TJAP1Q5JTD0 557 aa21.51■■□□□ 1.03
SSH3-209ENST00000532600 MCTP2Q6DN12 878 aa21.51■■□□□ 1.03
SSH3-209ENST00000532600 MTHFD1LQ6UB35 978 aa21.51■■□□□ 1.03
SSH3-209ENST00000532600 CCDC148Q8NFR7 591 aa21.51■■□□□ 1.03
SSH3-209ENST00000532600 LINC01599Q8WXQ3 324 aa21.51■■□□□ 1.03
SSH3-209ENST00000532600 XIRP2A4UGR9 3374 aa21.51■■□□□ 1.03
SSH3-209ENST00000532600 UPP2O95045 317 aa21.5■■□□□ 1.03
SSH3-209ENST00000532600 ANAPC15P60006 121 aa21.5■■□□□ 1.03
SSH3-209ENST00000532600 SETQ01105 290 aaPredicted RBP21.5■■□□□ 1.03
SSH3-209ENST00000532600 TMEM62Q0P6H9 643 aa21.5■■□□□ 1.03
SSH3-209ENST00000532600 SWSAP1Q6NVH7 229 aa21.5■■□□□ 1.03
SSH3-209ENST00000532600 RSPH3Q86UC2 560 aa21.5■■□□□ 1.03
SSH3-209ENST00000532600 BICD2Q8TD16 824 aa21.5■■□□□ 1.03
SSH3-209ENST00000532600 ATP8B4Q8TF62 1192 aa21.5■■□□□ 1.03
SSH3-209ENST00000532600 ATXN2LQ8WWM7 1075 aaKnown RBP21.5■■□□□ 1.03
SSH3-209ENST00000532600 ZNF302Q9NR11 478 aa21.5■■□□□ 1.03
SSH3-209ENST00000532600 WDR81Q562E7 1941 aa21.5■■□□□ 1.03
SSH3-209ENST00000532600 BACH1O14867 736 aa21.49■■□□□ 1.03
SSH3-209ENST00000532600 MSH4O15457 936 aa21.49■■□□□ 1.03
SSH3-209ENST00000532600 GTPBP6O43824 516 aaPredicted RBP21.49■■□□□ 1.03
SSH3-209ENST00000532600 SLC26A2P50443 739 aa21.49■■□□□ 1.03
SSH3-209ENST00000532600 TFF2Q03403 129 aa21.49■■□□□ 1.03
SSH3-209ENST00000532600 SSRP1Q08945 709 aaKnown RBP21.49■■□□□ 1.03
SSH3-209ENST00000532600 SCRN1Q12765 414 aa21.49■■□□□ 1.03
SSH3-209ENST00000532600 TSHZ1Q6ZSZ6 1077 aa21.49■■□□□ 1.03
SSH3-209ENST00000532600 ASB2Q96Q27 587 aa21.49■■□□□ 1.03
SSH3-209ENST00000532600 KIF2CQ99661 725 aa21.49■■□□□ 1.03
SSH3-209ENST00000532600 TBC1D22BQ9NU19 505 aa21.49■■□□□ 1.03
SSH3-209ENST00000532600 TPCN1Q9ULQ1 816 aa21.49■■□□□ 1.03
SSH3-209ENST00000532600 MAFBQ9Y5Q3 323 aaPredicted RBP21.49■■□□□ 1.03
SSH3-209ENST00000532600 SMIM35A0A1B0GVV1 85 aa21.48■■□□□ 1.03
SSH3-209ENST00000532600 ENPP3O14638 875 aa21.48■■□□□ 1.03
SSH3-209ENST00000532600 DEXIO95424 95 aa21.48■■□□□ 1.03
SSH3-209ENST00000532600 LINC00271P0C7V0 271 aa21.48■■□□□ 1.03
SSH3-209ENST00000532600 CD52P31358 61 aa21.48■■□□□ 1.03
SSH3-209ENST00000532600 NLRP5P59047 1200 aa21.48■■□□□ 1.03
SSH3-209ENST00000532600 ZNF746Q6NUN9 644 aaPredicted RBP21.48■■□□□ 1.03
SSH3-209ENST00000532600 MIS18BP1Q6P0N0 1132 aa21.48■■□□□ 1.03
SSH3-209ENST00000532600 PDXDC2PQ6P474 469 aa21.48■■□□□ 1.03
SSH3-209ENST00000532600 RTN4RL1Q86UN2 441 aaPredicted RBP21.48■■□□□ 1.03
SSH3-209ENST00000532600 GJA10Q969M2 543 aa21.48■■□□□ 1.03
SSH3-209ENST00000532600 C22orf23Q9BZE7 217 aa21.48■■□□□ 1.03
SSH3-209ENST00000532600 RC3H2Q9HBD1 1191 aaKnown RBP21.48■■□□□ 1.03
SSH3-209ENST00000532600 PCDHA4Q9UN74 947 aa21.48■■□□□ 1.03
SSH3-209ENST00000532600 TRPV2Q9Y5S1 764 aa21.48■■□□□ 1.03
SSH3-209ENST00000532600 NLRC5Q86WI3 1866 aa21.47■■□□□ 1.03
SSH3-209ENST00000532600 HBP1O60381 514 aa21.47■■□□□ 1.03
SSH3-209ENST00000532600 KLRC1P26715 233 aa21.47■■□□□ 1.03
SSH3-209ENST00000532600 FAM160B1Q5W0V3 765 aa21.47■■□□□ 1.03
SSH3-209ENST00000532600 TRIM22Q8IYM9 498 aa21.47■■□□□ 1.03
SSH3-209ENST00000532600 KIAA0319LQ8IZA0 1049 aa21.47■■□□□ 1.03
SSH3-209ENST00000532600 CRIPAKQ8N1N5 446 aa21.47■■□□□ 1.03
SSH3-209ENST00000532600 DAGLBQ8NCG7 672 aa21.47■■□□□ 1.03
SSH3-209ENST00000532600 TBCKQ8TEA7 893 aa21.47■■□□□ 1.03
SSH3-209ENST00000532600 CDHR5Q9HBB8 845 aa21.47■■□□□ 1.03
SSH3-209ENST00000532600 TTC3P53804 2025 aa21.46■■□□□ 1.03
SSH3-209ENST00000532600 RBM25P49756 843 aaKnown RBP21.46■■□□□ 1.03
SSH3-209ENST00000532600 USP11P51784 963 aa21.46■■□□□ 1.03
SSH3-209ENST00000532600 MRPS5P82675 430 aaKnown RBP21.46■■□□□ 1.03
SSH3-209ENST00000532600 KRT76Q01546 638 aa21.46■■□□□ 1.03
SSH3-209ENST00000532600 IER5Q5VY09 327 aa21.46■■□□□ 1.03
SSH3-209ENST00000532600 SLC5A5Q92911 643 aa21.46■■□□□ 1.03
SSH3-209ENST00000532600 TNPO1Q92973 898 aaKnown RBP21.46■■□□□ 1.03
SSH3-209ENST00000532600 YME1L1Q96TA2 773 aa21.46■■□□□ 1.03
SSH3-209ENST00000532600 CELF4Q9BZC1 486 aaKnown RBP21.46■■□□□ 1.03
SSH3-209ENST00000532600 PCDHA10Q9Y5I2 948 aa21.46■■□□□ 1.03
SSH3-209ENST00000532600 MYH9P35579 1960 aaKnown RBP21.46■■□□□ 1.03
SSH3-209ENST00000532600 IGSF9BQ9UPX0 1349 aa21.46■■□□□ 1.03
SSH3-209ENST00000532600 KDM3AQ9Y4C1 1321 aa21.46■■□□□ 1.03
SSH3-209ENST00000532600 COL1A2P08123 1366 aa21.46■■□□□ 1.03
SSH3-209ENST00000532600 EVPLQ92817 2033 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 CPLX1O14810 134 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 ZNF862O60290 1169 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 PFKFB2O60825 505 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 CTDNEP1O95476 244 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 C22orf31O95567 290 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 EPC2Q52LR7 807 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 ZNF484Q5JVG2 852 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 SMAP1Q8IYB5 467 aaPredicted RBP21.45■■□□□ 1.02
SSH3-209ENST00000532600 BLIDQ8IZY5 108 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 FBXO22Q8NEZ5 403 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 TMX1Q9H3N1 280 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 GJB4Q9NTQ9 266 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 LMCD1Q9NZU5 365 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 GABBR1Q9UBS5 961 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 PADI3Q9ULW8 664 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 KCNJ14Q9UNX9 436 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 SQORQ9Y6N5 450 aa21.45■■□□□ 1.02
SSH3-209ENST00000532600 MUC3AQ02505 3323 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms