RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ADCY6O43306 1168 aa14.06□□□□□ -0.16
COPB1-208ENST00000532088 CNGA1P29973 690 aa14.06□□□□□ -0.16
COPB1-208ENST00000532088 TECP42680 631 aa14.06□□□□□ -0.16
COPB1-208ENST00000532088 CPT1AP50416 773 aa14.06□□□□□ -0.16
COPB1-208ENST00000532088 EPHA7Q15375 998 aa14.06□□□□□ -0.16
COPB1-208ENST00000532088 IL17AQ16552 155 aa14.06□□□□□ -0.16
COPB1-208ENST00000532088 HAUS3Q68CZ6 603 aa14.06□□□□□ -0.16
COPB1-208ENST00000532088 ADALQ6DHV7 355 aa14.06□□□□□ -0.16
COPB1-208ENST00000532088 OR6J1Q8NGC5 347 aa14.06□□□□□ -0.16
COPB1-208ENST00000532088 ERMNQ8TAM6 284 aa14.06□□□□□ -0.16
COPB1-208ENST00000532088 SEPT1Q8WYJ6 367 aa14.06□□□□□ -0.16
COPB1-208ENST00000532088 SPATA33Q96N06 139 aa14.06□□□□□ -0.16
COPB1-208ENST00000532088 GPR20Q99678 358 aa14.06□□□□□ -0.16
COPB1-208ENST00000532088 PCDHA10Q9Y5I2 948 aa14.06□□□□□ -0.16
COPB1-208ENST00000532088 VWA3AA6NCI4 1184 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 NOP56O00567 594 aaKnown RBP14.05□□□□□ -0.16
COPB1-208ENST00000532088 ZEB2O60315 1214 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 KPNA6O60684 536 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 DKC1O60832 514 aaKnown RBP eCLIP14.05□□□□□ -0.16
COPB1-208ENST00000532088 ADAMTS4O75173 837 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 PPFIA4O75335 1185 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 CCNE2O96020 404 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 MARCKSP29966 332 aaPredicted RBP14.05□□□□□ -0.16
COPB1-208ENST00000532088 ACTR2P61160 394 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 HSDL1Q3SXM5 330 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 MIS18BP1Q6P0N0 1132 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 ABHD15Q6UXT9 468 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 MIER3Q7Z3K6 550 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 AFAP1L1Q8TED9 768 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 COPS5Q92905 334 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 RNF166Q96A37 237 aaPredicted RBP14.05□□□□□ -0.16
COPB1-208ENST00000532088 MCOLN1Q9GZU1 580 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 XPNPEP3Q9NQH7 507 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 DISC1Q9NRI5 854 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 PKD2L1Q9P0L9 805 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 LRWD1Q9UFC0 647 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 PCDHA7Q9UN72 937 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 EMSYQ7Z589 1322 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 TCHHQ07283 1943 aa14.05□□□□□ -0.16
COPB1-208ENST00000532088 A0A1W2PQ27 194 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 A0A1W2PQ64 194 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 A0A1W2PQD8 194 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 DYNC1LI2O43237 492 aaPredicted RBP14.04□□□□□ -0.16
COPB1-208ENST00000532088 LGR5O75473 907 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 PSAPP07602 524 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 MMP3P08254 477 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 SUPT20HL2P0C7V6 817 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 CCL5P13501 91 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 ME1P48163 572 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 SLC26A2P50443 739 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 DGKDQ16760 1214 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 HYIQ5T013 277 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 AXDND1Q5T1B0 1012 aaPredicted RBP14.04□□□□□ -0.16
COPB1-208ENST00000532088 TMEM63BQ5T3F8 832 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 KLHDC9Q8NEP7 349 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 GJA10Q969M2 543 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 POLR3CQ9BUI4 534 aaPredicted RBP14.04□□□□□ -0.16
COPB1-208ENST00000532088 CCSER1Q9C0I3 900 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 CSRNP2Q9H175 543 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 UNC93B1Q9H1C4 597 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 TUFT1Q9NNX1 390 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 SYNRGQ9UMZ2 1314 aa14.04□□□□□ -0.16
COPB1-208ENST00000532088 FAM237AA0A1B0GTK4 181 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 GSTTP1A0A1W2PQM5 241 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 DDX39AO00148 427 aaKnown RBP14.03□□□□□ -0.16
COPB1-208ENST00000532088 CTAGE5O15320 804 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 LYPLA2O95372 231 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 P4HBP07237 508 aaKnown RBP14.03□□□□□ -0.16
COPB1-208ENST00000532088 GJB1P08034 283 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 CFHP08603 1231 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 RPA1P27694 616 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 FSCN1Q16658 493 aaKnown RBP14.03□□□□□ -0.16
COPB1-208ENST00000532088 GJC2Q5T442 439 aaPredicted RBP14.03□□□□□ -0.16
COPB1-208ENST00000532088 FAM160B1Q5W0V3 765 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 KRT79Q5XKE5 535 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 NCAPH2Q6IBW4 605 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 PLPPR4Q7Z2D5 763 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 RNF180Q86T96 592 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 PCSK9Q8NBP7 692 aaKnown RBP14.03□□□□□ -0.16
COPB1-208ENST00000532088 ARRDC4Q8NCT1 418 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 AFG1LQ8WV93 481 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 ATP6V0A1Q93050 837 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 CHAMP1Q96JM3 812 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 HSD17B14Q9BPX1 270 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 PYM1Q9BRP8 204 aaKnown RBP14.03□□□□□ -0.16
COPB1-208ENST00000532088 TSEN34Q9BSV6 310 aaKnown RBP14.03□□□□□ -0.16
COPB1-208ENST00000532088 BCAS3Q9H6U6 928 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 OGDHLQ9ULD0 1010 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 IGSF9BQ9UPX0 1349 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 KDM3AQ9Y4C1 1321 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 FRMPD3Q5JV73 1810 aa14.03□□□□□ -0.16
COPB1-208ENST00000532088 MOXD2PA6NHM9 499 aa14.02□□□□□ -0.17
COPB1-208ENST00000532088 GOLGA6L22H0YM25 854 aa14.02□□□□□ -0.17
COPB1-208ENST00000532088 EML1O00423 815 aa14.02□□□□□ -0.17
COPB1-208ENST00000532088 CHMP2AO43633 222 aa14.02□□□□□ -0.17
COPB1-208ENST00000532088 CMA1P23946 247 aa14.02□□□□□ -0.17
COPB1-208ENST00000532088 TCF7P36402 384 aaPredicted RBP14.02□□□□□ -0.17
COPB1-208ENST00000532088 TXLNAP40222 546 aa14.02□□□□□ -0.17
COPB1-208ENST00000532088 QARSP47897 775 aaKnown RBP14.02□□□□□ -0.17
COPB1-208ENST00000532088 GRIN1Q05586 938 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms