RNA–Protein interactions for RNA: ENST00000529446.5

C9orf135-207, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-207ENST00000529446 GDPD2Q9HCC8 539 aa13.15□□□□□ -0.3
C9orf135-207ENST00000529446 ANKEF1Q9NU02 776 aa13.15□□□□□ -0.3
C9orf135-207ENST00000529446 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
C9orf135-207ENST00000529446 RGL1Q9NZL6 768 aa13.15□□□□□ -0.3
C9orf135-207ENST00000529446 COL1A2P08123 1366 aa13.15□□□□□ -0.3
C9orf135-207ENST00000529446 DOCK5Q9H7D0 1870 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 A0A1W2PQ45 241 aaPredicted RBP13.14□□□□□ -0.31
C9orf135-207ENST00000529446 A0A1W2PQY0 241 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 RRN3P2A6NIE6 340 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 PP2D1A8MPX8 630 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 ZNF862O60290 1169 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 MED24O75448 989 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 GNAT1P11488 350 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 IRX5P78411 483 aaPredicted RBP13.14□□□□□ -0.31
C9orf135-207ENST00000529446 PLCB4Q15147 1175 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 KIAA0753Q2KHM9 967 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 TMEM119Q4V9L6 283 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 NFRKBQ6P4R8 1299 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 SHC4Q6S5L8 630 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 SESTD1Q86VW0 696 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 TRIM50Q86XT4 487 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 EXOC8Q8IYI6 725 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 TNS4Q8IZW8 715 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 EPSTI1Q96J88 318 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 NIFKQ9BYG3 293 aaKnown RBP13.14□□□□□ -0.31
C9orf135-207ENST00000529446 CUEDC2Q9H467 287 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 STARD7Q9NQZ5 370 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 STK17AQ9UEE5 414 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 USP25Q9UHP3 1055 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 DBR1Q9UK59 544 aaKnown RBP13.14□□□□□ -0.31
C9orf135-207ENST00000529446 KIAA1024Q9UPX6 916 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 DNM3Q9UQ16 869 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 TRPC6Q9Y210 931 aa13.14□□□□□ -0.31
C9orf135-207ENST00000529446 NRCAMQ92823 1304 aa13.13□□□□□ -0.31
C9orf135-207ENST00000529446 A0A0U1RQG5 324 aaPredicted RBP13.13□□□□□ -0.31
C9orf135-207ENST00000529446 COL6A1P12109 1028 aa13.13□□□□□ -0.31
C9orf135-207ENST00000529446 ATP4AP20648 1035 aa13.13□□□□□ -0.31
C9orf135-207ENST00000529446 CDC25AP30304 524 aa13.13□□□□□ -0.31
C9orf135-207ENST00000529446 YWHABP31946 246 aaKnown RBP13.13□□□□□ -0.31
C9orf135-207ENST00000529446 UBE2HP62256 183 aa13.13□□□□□ -0.31
C9orf135-207ENST00000529446 CTTNQ14247 550 aaKnown RBP13.13□□□□□ -0.31
C9orf135-207ENST00000529446 UGCGQ16739 394 aa13.13□□□□□ -0.31
C9orf135-207ENST00000529446 ZNF484Q5JVG2 852 aa13.13□□□□□ -0.31
C9orf135-207ENST00000529446 C1orf53Q5VUE5 145 aa13.13□□□□□ -0.31
C9orf135-207ENST00000529446 RRAGBQ5VZM2 374 aa13.13□□□□□ -0.31
C9orf135-207ENST00000529446 POTEGQ6S5H5 508 aa13.13□□□□□ -0.31
C9orf135-207ENST00000529446 NECAB2Q7Z6G3 386 aa13.13□□□□□ -0.31
C9orf135-207ENST00000529446 C7orf31Q8N865 590 aa13.13□□□□□ -0.31
C9orf135-207ENST00000529446 SLC43A3Q8NBI5 491 aa13.13□□□□□ -0.31
C9orf135-207ENST00000529446 MRPS27Q92552 414 aaKnown RBP13.13□□□□□ -0.31
C9orf135-207ENST00000529446 CCDC43Q96MW1 224 aaKnown RBP13.13□□□□□ -0.31
C9orf135-207ENST00000529446 DDX19AQ9NUU7 478 aaKnown RBP13.13□□□□□ -0.31
C9orf135-207ENST00000529446 MROH7Q68CQ1 1323 aa13.13□□□□□ -0.31
C9orf135-207ENST00000529446 CENPFP49454 3210 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 DDX11L8A8MPP1 907 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 STBD1O95210 358 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 EYA4O95677 639 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 PLCG1P19174 1290 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 PTMSP20962 102 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 MARK3P27448 753 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 MNX1P50219 401 aaPredicted RBP13.12□□□□□ -0.31
C9orf135-207ENST00000529446 PPFIA1Q13136 1202 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 GRB10Q13322 594 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 ITGA7Q13683 1181 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 NBPF20Q3BBV1 942 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 SPECC1Q5M775 1068 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 USP49Q70CQ1 688 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 ANO5Q75V66 913 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 IQUBQ8NA54 791 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 VTI1AQ96AJ9 217 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 PNMA5Q96PV4 448 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 JPH2Q9BR39 696 aaPredicted RBP13.12□□□□□ -0.31
C9orf135-207ENST00000529446 RNPEPQ9H4A4 650 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 C11orf49Q9H6J7 331 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 MAGEF1Q9HAY2 307 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 WRAP73Q9P2S5 460 aaPredicted RBP13.12□□□□□ -0.31
C9orf135-207ENST00000529446 SEPT9Q9UHD8 586 aaPredicted RBP13.12□□□□□ -0.31
C9orf135-207ENST00000529446 KCNH3Q9ULD8 1083 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 HPSEQ9Y251 543 aa13.12□□□□□ -0.31
C9orf135-207ENST00000529446 ARVCFO00192 962 aa13.11□□□□□ -0.31
C9orf135-207ENST00000529446 MAGEB2O15479 319 aa13.11□□□□□ -0.31
C9orf135-207ENST00000529446 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
C9orf135-207ENST00000529446 PRPF40AO75400 957 aaKnown RBP13.11□□□□□ -0.31
C9orf135-207ENST00000529446 RPLP2P05387 115 aaKnown RBP13.11□□□□□ -0.31
C9orf135-207ENST00000529446 SMIM10L2AP0DMW4 78 aa13.11□□□□□ -0.31
C9orf135-207ENST00000529446 SMIM10L2BP0DMW5 78 aa13.11□□□□□ -0.31
C9orf135-207ENST00000529446 INSRRP14616 1297 aa13.11□□□□□ -0.31
C9orf135-207ENST00000529446 PFKFB1P16118 471 aa13.11□□□□□ -0.31
C9orf135-207ENST00000529446 HOXC8P31273 242 aa13.11□□□□□ -0.31
C9orf135-207ENST00000529446 STAT6P42226 847 aa13.11□□□□□ -0.31
C9orf135-207ENST00000529446 KARSQ15046 597 aaKnown RBP13.11□□□□□ -0.31
C9orf135-207ENST00000529446 TARBP2Q15633 366 aaKnown RBP13.11□□□□□ -0.31
C9orf135-207ENST00000529446 ZRSR1Q15695 479 aaKnown RBP13.11□□□□□ -0.31
C9orf135-207ENST00000529446 ECM1Q16610 540 aa13.11□□□□□ -0.31
C9orf135-207ENST00000529446 FSIP1Q8NA03 581 aa13.11□□□□□ -0.31
C9orf135-207ENST00000529446 CCDC34Q96HJ3 373 aa13.11□□□□□ -0.31
C9orf135-207ENST00000529446 LRRC27Q9C0I9 530 aa13.11□□□□□ -0.31
C9orf135-207ENST00000529446 SENP6Q9GZR1 1112 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms