RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 NEK1Q96PY6 1258 aa15.47■□□□□ 0.07
HIF3A-212ENST00000529205 JPH1Q9HDC5 661 aaPredicted RBP15.47■□□□□ 0.07
HIF3A-212ENST00000529205 TLR9Q9NR96 1032 aa15.47■□□□□ 0.07
HIF3A-212ENST00000529205 PCDHA2Q9Y5H9 948 aa15.47■□□□□ 0.07
HIF3A-212ENST00000529205 IGSF9BQ9UPX0 1349 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 E7EWF7 191 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 DDAH1O94760 285 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 ITGB5P18084 799 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 IBSPP21815 317 aaPredicted RBP15.46■□□□□ 0.07
HIF3A-212ENST00000529205 SARSP49591 514 aaKnown RBP15.46■□□□□ 0.07
HIF3A-212ENST00000529205 KRT76Q01546 638 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 TMEM62Q0P6H9 643 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 NFX1Q12986 1120 aaKnown RBP15.46■□□□□ 0.07
HIF3A-212ENST00000529205 ZBTB33Q86T24 672 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 CRIPAKQ8N1N5 446 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 TMTC2Q8N394 836 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 LINC01599Q8WXQ3 324 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 PHOX2BQ99453 314 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 SDF4Q9BRK5 362 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 SENP2Q9HC62 589 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 JADE2Q9NQC1 790 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 SLC9A2Q9UBY0 812 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 PUF60Q9UHX1 559 aaKnown RBP15.46■□□□□ 0.07
HIF3A-212ENST00000529205 UBIAD1Q9Y5Z9 338 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 KAT6AQ92794 2004 aa15.46■□□□□ 0.07
HIF3A-212ENST00000529205 SMIM35A0A1B0GVV1 85 aa15.45■□□□□ 0.06
HIF3A-212ENST00000529205 DENND3A2RUS2 1198 aa15.45■□□□□ 0.06
HIF3A-212ENST00000529205 STAT5BP51692 787 aa15.45■□□□□ 0.06
HIF3A-212ENST00000529205 CASC1Q6TDU7 716 aa15.45■□□□□ 0.06
HIF3A-212ENST00000529205 NFXL1Q6ZNB6 911 aa15.45■□□□□ 0.06
HIF3A-212ENST00000529205 PLPPR4Q7Z2D5 763 aa15.45■□□□□ 0.06
HIF3A-212ENST00000529205 THNSL1Q8IYQ7 743 aa15.45■□□□□ 0.06
HIF3A-212ENST00000529205 C1orf112Q9NSG2 853 aa15.45■□□□□ 0.06
HIF3A-212ENST00000529205 KDM3AQ9Y4C1 1321 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 DOCK5Q9H7D0 1870 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 CCDC69A6NI79 296 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 PER2O15055 1255 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 GFRA3O60609 400 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 RPS6KA5O75582 802 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 GLP2RO95838 553 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 CALM1P0DP23 149 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 CALM2P0DP24 149 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 CALM3P0DP25 149 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 SLC26A2P50443 739 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 NUBP1P53384 320 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 TCF15Q12870 199 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 ZNF654Q8IZM8 581 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 IGDCC4Q8TDY8 1250 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 ATOH1Q92858 354 aaPredicted RBP15.44■□□□□ 0.06
HIF3A-212ENST00000529205 MTA3Q9BTC8 594 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 TMEM260Q9NX78 707 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 PCDHA6Q9UN73 950 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 GINS2Q9Y248 185 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 PCDHA8Q9Y5H6 950 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 TTC3P53804 2025 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 PIEZO1Q92508 2521 aa15.44■□□□□ 0.06
HIF3A-212ENST00000529205 TBKBP1A7MCY6 615 aa15.43■□□□□ 0.06
HIF3A-212ENST00000529205 GPR182O15218 404 aa15.43■□□□□ 0.06
HIF3A-212ENST00000529205 FGF18O76093 207 aa15.43■□□□□ 0.06
HIF3A-212ENST00000529205 IGHDP01880 384 aa15.43■□□□□ 0.06
HIF3A-212ENST00000529205 AVPR2P30518 371 aa15.43■□□□□ 0.06
HIF3A-212ENST00000529205 PLCB4Q15147 1175 aa15.43■□□□□ 0.06
HIF3A-212ENST00000529205 PTPN21Q16825 1174 aa15.43■□□□□ 0.06
HIF3A-212ENST00000529205 DUSP6Q16828 381 aa15.43■□□□□ 0.06
HIF3A-212ENST00000529205 SLC24A5Q71RS6 500 aa15.43■□□□□ 0.06
HIF3A-212ENST00000529205 ZBTB10Q96DT7 871 aa15.43■□□□□ 0.06
HIF3A-212ENST00000529205 IL25Q9H293 177 aa15.43■□□□□ 0.06
HIF3A-212ENST00000529205 ATG2AQ2TAZ0 1938 aa15.43■□□□□ 0.06
HIF3A-212ENST00000529205 LAG3P18627 525 aa15.42■□□□□ 0.06
HIF3A-212ENST00000529205 GATMP50440 423 aa15.42■□□□□ 0.06
HIF3A-212ENST00000529205 TMEM266Q2M3C6 531 aa15.42■□□□□ 0.06
HIF3A-212ENST00000529205 MTHFD1LQ6UB35 978 aa15.42■□□□□ 0.06
HIF3A-212ENST00000529205 ATP8B4Q8TF62 1192 aa15.42■□□□□ 0.06
HIF3A-212ENST00000529205 SUSD6Q92537 303 aa15.42■□□□□ 0.06
HIF3A-212ENST00000529205 PCYT2Q99447 389 aa15.42■□□□□ 0.06
HIF3A-212ENST00000529205 ADAM2Q99965 735 aa15.42■□□□□ 0.06
HIF3A-212ENST00000529205 MXRA8Q9BRK3 442 aa15.42■□□□□ 0.06
HIF3A-212ENST00000529205 MYL10Q9BUA6 226 aa15.42■□□□□ 0.06
HIF3A-212ENST00000529205 ATP6V0A4Q9HBG4 840 aa15.42■□□□□ 0.06
HIF3A-212ENST00000529205 RGS18Q9NS28 235 aa15.42■□□□□ 0.06
HIF3A-212ENST00000529205 KCNH7Q9NS40 1196 aa15.42■□□□□ 0.06
HIF3A-212ENST00000529205 NR2E1Q9Y466 385 aa15.42■□□□□ 0.06
HIF3A-212ENST00000529205 NFASCO94856 1347 aa15.42■□□□□ 0.06
HIF3A-212ENST00000529205 HBP1O60381 514 aa15.41■□□□□ 0.06
HIF3A-212ENST00000529205 HOXB8P17481 243 aaPredicted RBP15.41■□□□□ 0.06
HIF3A-212ENST00000529205 KLRC1P26715 233 aa15.41■□□□□ 0.06
HIF3A-212ENST00000529205 TECP42680 631 aa15.41■□□□□ 0.06
HIF3A-212ENST00000529205 ACTR2P61160 394 aa15.41■□□□□ 0.06
HIF3A-212ENST00000529205 PTH1RQ03431 593 aa15.41■□□□□ 0.06
HIF3A-212ENST00000529205 KRT17Q04695 432 aa15.41■□□□□ 0.06
HIF3A-212ENST00000529205 UBE2SQ16763 222 aa15.41■□□□□ 0.06
HIF3A-212ENST00000529205 FAM160B1Q5W0V3 765 aa15.41■□□□□ 0.06
HIF3A-212ENST00000529205 TMEM184AQ6ZMB5 413 aa15.41■□□□□ 0.06
HIF3A-212ENST00000529205 SRBD1Q8N5C6 995 aaKnown RBP15.41■□□□□ 0.06
HIF3A-212ENST00000529205 COLGALT1Q8NBJ5 622 aa15.41■□□□□ 0.06
HIF3A-212ENST00000529205 TRAPPC12Q8WVT3 735 aa15.41■□□□□ 0.06
HIF3A-212ENST00000529205 ASIC4Q96FT7 647 aa15.41■□□□□ 0.06
HIF3A-212ENST00000529205 TMEM87BQ96K49 555 aa15.41■□□□□ 0.06
HIF3A-212ENST00000529205 TMX1Q9H3N1 280 aa15.41■□□□□ 0.06
HIF3A-212ENST00000529205 LY9Q9HBG7 655 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms