RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 LURAP1LQ8IV03 231 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 UBALD2Q8IYN6 164 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 ANKRD35Q8N283 1001 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 FAM133AQ8N9E0 248 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 NCOA7Q8NI08 942 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 UBA5Q9GZZ9 404 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 CPVLQ9H3G5 476 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 ACAD9Q9H845 621 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 KAT14Q9H8E8 782 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 SENP2Q9HC62 589 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 CLEC1BQ9P126 229 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 GNEQ9Y223 722 aaKnown RBP9.85□□□□□ -0.83
SSBP3-212ENST00000528930 USP15Q9Y4E8 981 aaPredicted RBP9.85□□□□□ -0.83
SSBP3-212ENST00000528930 LCTP09848 1927 aa9.85□□□□□ -0.83
SSBP3-212ENST00000528930 CNOT1A5YKK6 2376 aaKnown RBP9.84□□□□□ -0.83
SSBP3-212ENST00000528930 ABHD14A-ACY1A0A1B0GW23 586 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 SLC27A2O14975 620 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 CXCL10P02778 98 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 NEFLP07196 543 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 CNTN2Q02246 1040 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 TRDNQ13061 729 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 IFIT1BQ5T764 474 aaKnown RBP9.84□□□□□ -0.83
SSBP3-212ENST00000528930 KIAA1211Q6ZU35 1233 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 CHST3Q7LGC8 479 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 TLK2Q86UE8 772 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 FBXO11Q86XK2 927 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 MB21D2Q8IYB1 491 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-212ENST00000528930 RETREG2Q8NC44 543 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 RPGRIP1Q96KN7 1286 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 UBAC1Q9BSL1 405 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 LMAN2LQ9H0V9 348 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 ATP13A2Q9NQ11 1180 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 CDV3Q9UKY7 258 aaKnown RBP9.84□□□□□ -0.83
SSBP3-212ENST00000528930 CCPG1Q9ULG6 757 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 R4GN57 208 aa9.84□□□□□ -0.83
SSBP3-212ENST00000528930 CEP295Q9C0D2 2601 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.83□□□□□ -0.84
SSBP3-212ENST00000528930 PRR5-ARHGAP8B1AHC4 643 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 IFIT3O14879 490 aaKnown RBP9.83□□□□□ -0.84
SSBP3-212ENST00000528930 EFCAB14O75071 495 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 CDC45O75419 566 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 PROS1P07225 676 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 NDUFV1P49821 464 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 ARHGAP8P85298 464 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 SHC2P98077 582 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 ASPRV1Q53RT3 343 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 CREB3L3Q68CJ9 461 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 RALYLQ86SE5 291 aaKnown RBP9.83□□□□□ -0.84
SSBP3-212ENST00000528930 TMEM192Q8IY95 271 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 STAG2Q8N3U4 1231 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 SUMF1Q8NBK3 374 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 KREMEN2Q8NCW0 462 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 IGDCC4Q8TDY8 1250 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 CLEC4DQ8WXI8 215 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 SUSD6Q92537 303 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 ANO2Q9NQ90 1003 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 CYP39A1Q9NYL5 469 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 MAD2L2Q9UI95 211 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 ANGPTL2Q9UKU9 493 aa9.83□□□□□ -0.84
SSBP3-212ENST00000528930 WDR19Q8NEZ3 1342 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 IGF2RP11717 2491 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 PALM3A6NDB9 673 aaPredicted RBP9.82□□□□□ -0.84
SSBP3-212ENST00000528930 NFIBO00712 420 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 ZEB2O60315 1214 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 BRD1O95696 1058 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 PARP1P09874 1014 aaKnown RBP9.82□□□□□ -0.84
SSBP3-212ENST00000528930 ARP10275 920 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 AOC1P19801 751 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 TROAPQ12815 778 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 BFSP2Q13515 415 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 MTMR3Q13615 1198 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 SLC35G1Q2M3R5 365 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 PPM1JQ5JR12 505 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 FAM117BQ6P1L5 589 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 NSMFQ6X4W1 530 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 ADGRF4Q8IZF3 695 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 GPR161Q8N6U8 529 aaKnown RBP9.82□□□□□ -0.84
SSBP3-212ENST00000528930 DTWD2Q8NBA8 298 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 SNIP1Q8TAD8 396 aaKnown RBP9.82□□□□□ -0.84
SSBP3-212ENST00000528930 MRGPRX2Q96LB1 330 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 PURBQ96QR8 312 aaKnown RBP9.82□□□□□ -0.84
SSBP3-212ENST00000528930 JMJD4Q9H9V9 463 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 SORCS3Q9UPU3 1222 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 PLXNA4Q9HCM2 1894 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 CACNA1IQ9P0X4 2223 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 PATJQ8NI35 1801 aa9.82□□□□□ -0.84
SSBP3-212ENST00000528930 KLRF2D3W0D1 207 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 C5orf67F2Z3F1 127 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 WNT7AO00755 349 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 GPR37O15354 613 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 PMLP29590 882 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 TNFAIP2Q03169 654 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 LMNB2Q03252 620 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 BAATQ14032 418 aaPredicted RBP9.81□□□□□ -0.84
SSBP3-212ENST00000528930 GRM4Q14833 912 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 WTAPQ15007 396 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 CDC37Q16543 378 aaPredicted RBP9.81□□□□□ -0.84
SSBP3-212ENST00000528930 LRSAM1Q6UWE0 723 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 ARMCX2Q7L311 632 aa9.81□□□□□ -0.84
SSBP3-212ENST00000528930 CCDC144CPQ8IYA2 1237 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms