RNA–Protein interactions for RNA: ENST00000528395.1

TMX2-CTNND1-201, Transcript of TMX2-CTNND1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMX2-CTNND1, Length 585 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1-201ENST00000528395 MIER3Q7Z3K6 550 aa12.67□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 RSPH3Q86UC2 560 aa12.67□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 NOSTRINQ8IVI9 506 aa12.67□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 HAS1Q92839 578 aa12.67□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 WNT8BQ93098 351 aa12.67□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 VWCEQ96DN2 955 aa12.67□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 RNPC3Q96LT9 517 aaKnown RBP12.67□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 GABBR1Q9UBS5 961 aa12.67□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 CEP131Q9UPN4 1083 aa12.67□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 PCDHA2Q9Y5H9 948 aa12.67□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 MYH9P35579 1960 aaKnown RBP12.67□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 CHMP2AO43633 222 aa12.66□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 NEMFO60524 1076 aa12.66□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 DKC1O60832 514 aaKnown RBP eCLIP12.66□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 ACTN1P12814 892 aa12.66□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 POTEDQ86YR6 584 aa12.66□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 CKAP2LQ8IYA6 745 aa12.66□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 NME8Q8N427 588 aa12.66□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 GJA10Q969M2 543 aa12.66□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 SNX21Q969T3 373 aa12.66□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 NRBP2Q9NSY0 501 aa12.66□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 VAV3Q9UKW4 847 aa12.66□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 NOL7Q9UMY1 257 aaKnown RBP12.66□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 TANC1Q9C0D5 1861 aa12.65□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.65□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.65□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 BAIAP3O94812 1187 aa12.65□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 IGBP1P78318 339 aa12.65□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 SMAD3P84022 425 aaKnown RBP12.65□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 GPNMBQ14956 572 aa12.65□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 EPHA7Q15375 998 aa12.65□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 CALCRLQ16602 461 aa12.65□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 MTHFD1LQ6UB35 978 aa12.65□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 DEFB128Q7Z7B8 93 aa12.65□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 INTS4Q96HW7 963 aaKnown RBP12.65□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 MTMR9Q96QG7 549 aa12.65□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 FTOQ9C0B1 505 aaKnown RBP eCLIP12.65□□□□□ -0.382e-18■□□□□ 11.2
TMX2-CTNND1-201ENST00000528395 PCDHA12Q9UN75 941 aa12.65□□□□□ -0.38
TMX2-CTNND1-201ENST00000528395 SMIM35A0A1B0GVV1 85 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 ZBTB42B2RXF5 422 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 H3BQV1 296 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 EML1O00423 815 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 SOX1O00570 391 aaPredicted RBP12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 MAGEB2O15479 319 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 ZNF862O60290 1169 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 NBNO60934 754 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 EFCAB14O75071 495 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 OATP04181 439 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 P4HBP07237 508 aaKnown RBP12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 PDCP20941 246 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 KLRC1P26715 233 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 QARSP47897 775 aaKnown RBP12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 PSMC5P62195 406 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 PRKCEQ02156 737 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 SPIRE1Q08AE8 756 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 MBTPS1Q14703 1052 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 XKR3Q5GH77 459 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 IER5Q5VY09 327 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 LARP1BQ659C4 914 aaKnown RBP12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 CNKSR3Q6P9H4 555 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 RUFY4Q6ZNE9 571 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 FAM43BQ6ZT52 329 aaPredicted RBP12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 OTOP2Q7RTS6 562 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 ZNF710Q8N1W2 664 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 NIFKQ9BYG3 293 aaKnown RBP12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 SQORQ9Y6N5 450 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 TET1Q8NFU7 2136 aa12.64□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 WDR81Q562E7 1941 aa12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 SCN5AQ14524 2016 aa12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 ABHD14A-ACY1A0A1B0GW23 586 aa12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 KIF28PB7ZC32 967 aa12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 K7ELQ4 463 aaPredicted RBP12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 WNT7AO00755 349 aa12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 ATP2B1P20020 1258 aa12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 MCM7P33993 719 aa12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 UGCGQ16739 394 aa12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 TTC38Q5R3I4 469 aa12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 FAM109BQ6ICB4 259 aaPredicted RBP12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 PHOSPHO2Q8TCD6 241 aa12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 TRAPPC12Q8WVT3 735 aa12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 DNAJB3Q8WWF6 145 aa12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 TTC12Q9H892 705 aaPredicted RBP12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 CXXC1Q9P0U4 656 aaPredicted RBP12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 SLC4A7Q9Y6M7 1214 aa12.63□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 KDM3AQ9Y4C1 1321 aa12.62□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 M0QZ92 97 aa12.62□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 STBD1O95210 358 aa12.62□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 C22orf31O95567 290 aa12.62□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 CHRNA1P02708 482 aa12.62□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 TXKP42681 527 aa12.62□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 MRPS6P82932 125 aaKnown RBP12.62□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 MGAT3Q09327 533 aa12.62□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 IKBKEQ14164 716 aa12.62□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 TARBP2Q15633 366 aaKnown RBP12.62□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 ZNF174Q15697 407 aa12.62□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 PLEKHG4Q58EX7 1191 aa12.62□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 RILPL1Q5EBL4 403 aa12.62□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 MCTP1Q6DN14 999 aa12.62□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 C4orf19Q8IY42 314 aa12.62□□□□□ -0.39
TMX2-CTNND1-201ENST00000528395 USP38Q8NB14 1042 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms