RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 LTBP1Q14766 1721 aa11.24□□□□□ -0.61
MSRA-210ENST00000528246 PCNTO95613 3336 aa11.24□□□□□ -0.61
MSRA-210ENST00000528246 BBOX1O75936 387 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 AFPP02771 609 aaKnown RBP11.23□□□□□ -0.61
MSRA-210ENST00000528246 MATR3P43243 847 aaKnown RBP eCLIP11.23□□□□□ -0.61
MSRA-210ENST00000528246 TNNI2P48788 182 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 EIF3BP55884 814 aaKnown RBP11.23□□□□□ -0.61
MSRA-210ENST00000528246 DDR1Q08345 913 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 RAPGEF1Q13905 1077 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 ECM1Q16610 540 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 CROCCP2Q86T23 111 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 CRYGNQ8WXF5 182 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 VTI1AQ96AJ9 217 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 KRT12Q99456 494 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 MKNK1Q9BUB5 465 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 PSTPIP2Q9H939 334 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 NLRC4Q9NPP4 1024 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 ARMCX3Q9UH62 379 aaPredicted RBP11.23□□□□□ -0.61
MSRA-210ENST00000528246 GGA1Q9UJY5 639 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 NAGPAQ9UK23 515 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 UBE4BO95155 1302 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 H0YGN5 161 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 GCOM1H8Y6P7 765 aaPredicted RBP11.23□□□□□ -0.61
MSRA-210ENST00000528246 RAD51CO43502 376 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 MYZAPP0CAP1 466 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 UCHL3P15374 230 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 FERP16591 822 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 MUTP22033 750 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 RFX1P22670 979 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 RPA1P27694 616 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 GBP1P32455 592 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 JAM2P57087 298 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 GRIK5Q16478 980 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 KNOP1Q1ED39 458 aaKnown RBP11.23□□□□□ -0.61
MSRA-210ENST00000528246 Q4G0T1 1027 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 HERC4Q5GLZ8 1057 aaPredicted RBP11.23□□□□□ -0.61
MSRA-210ENST00000528246 NAA35Q5VZE5 725 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 GPBP1Q86WP2 473 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 ADGRF4Q8IZF3 695 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 SYT2Q8N9I0 419 aaPredicted RBP11.23□□□□□ -0.61
MSRA-210ENST00000528246 CCDC26Q8TAB7 109 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 MKL1Q969V6 931 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 COA7Q96BR5 231 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 MS4A14Q96JA4 679 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 FAM20AQ96MK3 541 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 NAP1L3Q99457 506 aaPredicted RBP11.23□□□□□ -0.61
MSRA-210ENST00000528246 UBA5Q9GZZ9 404 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 DHX36Q9H2U1 1008 aaKnown RBP11.23□□□□□ -0.61
MSRA-210ENST00000528246 OLFML3Q9NRN5 406 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 FAM114A2Q9NRY5 505 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 TYW1Q9NV66 732 aaKnown RBP11.23□□□□□ -0.61
MSRA-210ENST00000528246 ADAMTS1Q9UHI8 967 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 HDAC9Q9UKV0 1011 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 STXBP5LQ9Y2K9 1186 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 NFS1Q9Y697 457 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 ARFGEF1Q9Y6D6 1849 aa11.23□□□□□ -0.61
MSRA-210ENST00000528246 EIF3DO15371 548 aaKnown RBP eCLIP11.22□□□□□ -0.61
MSRA-210ENST00000528246 MARCH6O60337 910 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 FOSP01100 380 aaPredicted RBP11.22□□□□□ -0.61
MSRA-210ENST00000528246 KRT14P02533 472 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 CCDC172P0C7W6 258 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 XRCC5P13010 732 aaKnown RBP11.22□□□□□ -0.61
MSRA-210ENST00000528246 NR2F2P24468 414 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 ECHS1P30084 290 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 HOXA10P31260 410 aaPredicted RBP11.22□□□□□ -0.61
MSRA-210ENST00000528246 MMP14P50281 582 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 PTK2Q05397 1052 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 TCEAL1Q15170 157 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 LRRC41Q15345 812 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 EXOC3L4Q17RC7 722 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 ALKBH5Q6P6C2 394 aaKnown RBP11.22□□□□□ -0.61
MSRA-210ENST00000528246 ANKRD13CQ8N6S4 541 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 FAM133AQ8N9E0 248 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 CNBD1Q8NA66 436 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 TPCN2Q8NHX9 752 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 DCAF4Q8WV16 495 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 CENPTQ96BT3 561 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 RNPC3Q96LT9 517 aaKnown RBP11.22□□□□□ -0.61
MSRA-210ENST00000528246 SPAG5Q96R06 1193 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 FAM129AQ9BZQ8 928 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 CPVLQ9H3G5 476 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 CNOT10Q9H9A5 744 aaKnown RBP11.22□□□□□ -0.61
MSRA-210ENST00000528246 ACTR5Q9H9F9 607 aaPredicted RBP11.22□□□□□ -0.61
MSRA-210ENST00000528246 VAT1LQ9HCJ6 419 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 NCANO14594 1321 aa11.22□□□□□ -0.61
MSRA-210ENST00000528246 C5orf60A6NFR6 353 aa11.21□□□□□ -0.61
MSRA-210ENST00000528246 FTCDO95954 541 aa11.21□□□□□ -0.61
MSRA-210ENST00000528246 H2AFZP0C0S5 128 aa11.21□□□□□ -0.61
MSRA-210ENST00000528246 FAM153BP0C7A2 387 aa11.21□□□□□ -0.61
MSRA-210ENST00000528246 GAP43P17677 238 aa11.21□□□□□ -0.61
MSRA-210ENST00000528246 CIITAP33076 1130 aa11.21□□□□□ -0.61
MSRA-210ENST00000528246 FNTAP49354 379 aa11.21□□□□□ -0.61
MSRA-210ENST00000528246 CDR1P51861 262 aa11.21□□□□□ -0.61
MSRA-210ENST00000528246 GTF2A1P52655 376 aaPredicted RBP11.21□□□□□ -0.61
MSRA-210ENST00000528246 DRG2P55039 364 aaKnown RBP11.21□□□□□ -0.61
MSRA-210ENST00000528246 HADHBP55084 474 aaKnown RBP11.21□□□□□ -0.61
MSRA-210ENST00000528246 SPIRE1Q08AE8 756 aa11.21□□□□□ -0.61
MSRA-210ENST00000528246 EPHA7Q15375 998 aa11.21□□□□□ -0.61
MSRA-210ENST00000528246 FAM153CQ494X1 144 aa11.21□□□□□ -0.61
MSRA-210ENST00000528246 MFSD14BQ5SR56 506 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms