RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 UIMC1Q96RL1 719 aa37.39■■■■□ 3.58
SSSCA1-205ENST00000527920 SLC17A8Q8NDX2 589 aa37.38■■■■□ 3.57
SSSCA1-205ENST00000527920 IFIH1Q9BYX4 1025 aaKnown RBP37.38■■■■□ 3.57
SSSCA1-205ENST00000527920 OSBPL7Q9BZF2 842 aa37.38■■■■□ 3.57
SSSCA1-205ENST00000527920 SMIM35A0A1B0GVV1 85 aa37.37■■■■□ 3.57
SSSCA1-205ENST00000527920 GAS7O60861 476 aa37.37■■■■□ 3.57
SSSCA1-205ENST00000527920 FDPSP14324 419 aaKnown RBP37.37■■■■□ 3.57
SSSCA1-205ENST00000527920 MRPS6P82932 125 aaKnown RBP37.37■■■■□ 3.57
SSSCA1-205ENST00000527920 ZNF484Q5JVG2 852 aa37.37■■■■□ 3.57
SSSCA1-205ENST00000527920 NSUN7Q8NE18 718 aaKnown RBP37.37■■■■□ 3.57
SSSCA1-205ENST00000527920 TRAPPC12Q8WVT3 735 aa37.37■■■■□ 3.57
SSSCA1-205ENST00000527920 CHD7Q9P2D1 2997 aa37.37■■■■□ 3.57
SSSCA1-205ENST00000527920 IGSF9BQ9UPX0 1349 aa37.36■■■■□ 3.57
SSSCA1-205ENST00000527920 CCDC194A0A1B0GVG4 234 aa37.36■■■■□ 3.57
SSSCA1-205ENST00000527920 TDP2O95551 362 aa37.36■■■■□ 3.57
SSSCA1-205ENST00000527920 AMHP03971 560 aa37.36■■■■□ 3.57
SSSCA1-205ENST00000527920 ATP4AP20648 1035 aa37.36■■■■□ 3.57
SSSCA1-205ENST00000527920 SFNP31947 248 aa37.36■■■■□ 3.57
SSSCA1-205ENST00000527920 LRCH2Q5VUJ6 765 aa37.36■■■■□ 3.57
SSSCA1-205ENST00000527920 IER5Q5VY09 327 aa37.36■■■■□ 3.57
SSSCA1-205ENST00000527920 MTHFD1LQ6UB35 978 aa37.36■■■■□ 3.57
SSSCA1-205ENST00000527920 BBXQ8WY36 941 aaPredicted RBP37.36■■■■□ 3.57
SSSCA1-205ENST00000527920 RAD9AQ99638 391 aa37.36■■■■□ 3.57
SSSCA1-205ENST00000527920 ZBED2Q9BTP6 218 aa37.36■■■■□ 3.57
SSSCA1-205ENST00000527920 SQORQ9Y6N5 450 aa37.36■■■■□ 3.57
SSSCA1-205ENST00000527920 PTPRSQ13332 1948 aa37.36■■■■□ 3.57
SSSCA1-205ENST00000527920 PSMD10O75832 226 aa37.35■■■■□ 3.57
SSSCA1-205ENST00000527920 TAP1Q03518 808 aa37.35■■■■□ 3.57
SSSCA1-205ENST00000527920 INF2Q27J81 1249 aa37.35■■■■□ 3.57
SSSCA1-205ENST00000527920 NME8Q8N427 588 aa37.35■■■■□ 3.57
SSSCA1-205ENST00000527920 RDM1Q8NG50 284 aa37.35■■■■□ 3.57
SSSCA1-205ENST00000527920 TEKT3Q9BXF9 490 aa37.35■■■■□ 3.57
SSSCA1-205ENST00000527920 DISC1Q9NRI5 854 aa37.35■■■■□ 3.57
SSSCA1-205ENST00000527920 CDY2AQ9Y6F7 541 aa37.35■■■■□ 3.57
SSSCA1-205ENST00000527920 MYO9BQ13459 2157 aa37.34■■■■□ 3.57
SSSCA1-205ENST00000527920 JAK3P52333 1124 aa37.34■■■■□ 3.57
SSSCA1-205ENST00000527920 LPIN1Q14693 890 aa37.34■■■■□ 3.57
SSSCA1-205ENST00000527920 FBXO47Q5MNV8 452 aa37.34■■■■□ 3.57
SSSCA1-205ENST00000527920 LIN28BQ6ZN17 250 aaKnown RBP eCLIP37.34■■■■□ 3.57
SSSCA1-205ENST00000527920 ETNPPLQ8TBG4 499 aa37.34■■■■□ 3.57
SSSCA1-205ENST00000527920 ZBTB10Q96DT7 871 aa37.34■■■■□ 3.57
SSSCA1-205ENST00000527920 FAM167AQ96KS9 214 aa37.34■■■■□ 3.57
SSSCA1-205ENST00000527920 FAM49AQ9H0Q0 323 aaPredicted RBP37.34■■■■□ 3.57
SSSCA1-205ENST00000527920 SAMM50Q9Y512 469 aa37.34■■■■□ 3.57
SSSCA1-205ENST00000527920 MICAL3Q7RTP6 2002 aa37.33■■■■□ 3.57
SSSCA1-205ENST00000527920 ZBTB42B2RXF5 422 aa37.33■■■■□ 3.57
SSSCA1-205ENST00000527920 GHRP10912 638 aa37.33■■■■□ 3.57
SSSCA1-205ENST00000527920 GCFC2P16383 781 aaKnown RBP37.33■■■■□ 3.57
SSSCA1-205ENST00000527920 CKAP2LQ8IYA6 745 aa37.33■■■■□ 3.57
SSSCA1-205ENST00000527920 USP38Q8NB14 1042 aa37.33■■■■□ 3.57
SSSCA1-205ENST00000527920 GJB4Q9NTQ9 266 aa37.33■■■■□ 3.57
SSSCA1-205ENST00000527920 GABBR1Q9UBS5 961 aa37.33■■■■□ 3.57
SSSCA1-205ENST00000527920 LIMCH1Q9UPQ0 1083 aa37.33■■■■□ 3.57
SSSCA1-205ENST00000527920 KLRC1P26715 233 aa37.32■■■■□ 3.56
SSSCA1-205ENST00000527920 PPP4R3AQ6IN85 833 aa37.32■■■■□ 3.56
SSSCA1-205ENST00000527920 B3GNT9Q6UX72 402 aa37.32■■■■□ 3.56
SSSCA1-205ENST00000527920 TSHZ1Q6ZSZ6 1077 aa37.32■■■■□ 3.56
SSSCA1-205ENST00000527920 TMCO2Q7Z6W1 182 aaPredicted RBP37.32■■■■□ 3.56
SSSCA1-205ENST00000527920 NEK8Q86SG6 692 aa37.32■■■■□ 3.56
SSSCA1-205ENST00000527920 NAP1L4Q99733 375 aaKnown RBP37.32■■■■□ 3.56
SSSCA1-205ENST00000527920 DDX25Q9UHL0 483 aaKnown RBP37.32■■■■□ 3.56
SSSCA1-205ENST00000527920 CEP131Q9UPN4 1083 aa37.32■■■■□ 3.56
SSSCA1-205ENST00000527920 KDM3AQ9Y4C1 1321 aa37.32■■■■□ 3.56
SSSCA1-205ENST00000527920 M0QZ92 97 aa37.31■■■■□ 3.56
SSSCA1-205ENST00000527920 ADGRE1Q14246 886 aa37.31■■■■□ 3.56
SSSCA1-205ENST00000527920 UNC45AQ9H3U1 944 aa37.31■■■■□ 3.56
SSSCA1-205ENST00000527920 BRMS1Q9HCU9 246 aa37.31■■■■□ 3.56
SSSCA1-205ENST00000527920 TRPV2Q9Y5S1 764 aa37.31■■■■□ 3.56
SSSCA1-205ENST00000527920 ARHGEF15O94989 841 aa37.3■■■■□ 3.56
SSSCA1-205ENST00000527920 LETM2Q2VYF4 491 aa37.3■■■■□ 3.56
SSSCA1-205ENST00000527920 MYOCDQ8IZQ8 938 aa37.3■■■■□ 3.56
SSSCA1-205ENST00000527920 OXER1Q8TDS5 423 aa37.3■■■■□ 3.56
SSSCA1-205ENST00000527920 KIF2CQ99661 725 aa37.3■■■■□ 3.56
SSSCA1-205ENST00000527920 INSL6Q9Y581 213 aa37.3■■■■□ 3.56
SSSCA1-205ENST00000527920 LOC101059915A0A1B0GWI6 518 aaPredicted RBP37.29■■■■□ 3.56
SSSCA1-205ENST00000527920 HTRA4P83105 476 aaPredicted RBP37.29■■■■□ 3.56
SSSCA1-205ENST00000527920 FAM43BQ6ZT52 329 aaPredicted RBP37.29■■■■□ 3.56
SSSCA1-205ENST00000527920 TOP1MTQ969P6 601 aa37.29■■■■□ 3.56
SSSCA1-205ENST00000527920 EYSQ5T1H1 3165 aa37.29■■■■□ 3.56
SSSCA1-205ENST00000527920 LCHNA4D1U4 455 aa37.28■■■■□ 3.56
SSSCA1-205ENST00000527920 DTNBO60941 627 aa37.28■■■■□ 3.56
SSSCA1-205ENST00000527920 C22orf31O95567 290 aa37.28■■■■□ 3.56
SSSCA1-205ENST00000527920 KRT2P35908 639 aa37.28■■■■□ 3.56
SSSCA1-205ENST00000527920 RBM25P49756 843 aaKnown RBP37.28■■■■□ 3.56
SSSCA1-205ENST00000527920 ST3GAL1Q11201 340 aa37.28■■■■□ 3.56
SSSCA1-205ENST00000527920 PIK3AP1Q6ZUJ8 805 aa37.28■■■■□ 3.56
SSSCA1-205ENST00000527920 FAM20AQ96MK3 541 aa37.28■■■■□ 3.56
SSSCA1-205ENST00000527920 CELF4Q9BZC1 486 aaKnown RBP37.28■■■■□ 3.56
SSSCA1-205ENST00000527920 KCNMB3Q9NPA1 279 aa37.28■■■■□ 3.56
SSSCA1-205ENST00000527920 SIP14410 1827 aa37.28■■■■□ 3.56
SSSCA1-205ENST00000527920 SLC37A4O43826 429 aa37.27■■■■□ 3.56
SSSCA1-205ENST00000527920 ZNF862O60290 1169 aa37.27■■■■□ 3.56
SSSCA1-205ENST00000527920 KIAA0319LQ8IZA0 1049 aa37.27■■■■□ 3.56
SSSCA1-205ENST00000527920 TNFRSF25Q93038 417 aa37.27■■■■□ 3.56
SSSCA1-205ENST00000527920 RBAK-RBAKDNI3L0D1 243 aa37.26■■■■□ 3.56
SSSCA1-205ENST00000527920 CHMP2AO43633 222 aa37.26■■■■□ 3.56
SSSCA1-205ENST00000527920 JAK2O60674 1132 aa37.26■■■■□ 3.56
SSSCA1-205ENST00000527920 OATP04181 439 aa37.26■■■■□ 3.56
SSSCA1-205ENST00000527920 POU3F3P20264 500 aaPredicted RBP37.26■■■■□ 3.56
SSSCA1-205ENST00000527920 PHF6Q8IWS0 365 aaKnown RBP eCLIP37.26■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms