RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 RTN4RL1Q86UN2 441 aaPredicted RBP11.85□□□□□ -0.51
PRPF40B-204ENST00000527253 MICALL1Q8N3F8 863 aa11.85□□□□□ -0.51
PRPF40B-204ENST00000527253 CCDC148Q8NFR7 591 aa11.85□□□□□ -0.51
PRPF40B-204ENST00000527253 BICD2Q8TD16 824 aa11.85□□□□□ -0.51
PRPF40B-204ENST00000527253 SP7Q8TDD2 431 aaPredicted RBP11.85□□□□□ -0.51
PRPF40B-204ENST00000527253 ATP8B4Q8TF62 1192 aa11.85□□□□□ -0.51
PRPF40B-204ENST00000527253 C17orf80Q9BSJ5 609 aa11.85□□□□□ -0.51
PRPF40B-204ENST00000527253 IFIH1Q9BYX4 1025 aaKnown RBP11.85□□□□□ -0.51
PRPF40B-204ENST00000527253 SUGCTQ9HAC7 445 aa11.85□□□□□ -0.51
PRPF40B-204ENST00000527253 ZNF302Q9NR11 478 aa11.85□□□□□ -0.51
PRPF40B-204ENST00000527253 MTUS1Q9ULD2 1270 aa11.85□□□□□ -0.51
PRPF40B-204ENST00000527253 PCDHA4Q9UN74 947 aa11.85□□□□□ -0.51
PRPF40B-204ENST00000527253 TRANK1O15050 2925 aa11.85□□□□□ -0.51
PRPF40B-204ENST00000527253 ENPP3O14638 875 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 CPLX1O14810 134 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 PFKFB2O60825 505 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 UPP2O95045 317 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 DEXIO95424 95 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 KLRC1P26715 233 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 CD52P31358 61 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 USP11P51784 963 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 SETQ01105 290 aaPredicted RBP11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 FAM160B1Q5W0V3 765 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 ZNF746Q6NUN9 644 aaPredicted RBP11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 MIS18BP1Q6P0N0 1132 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 RSPH3Q86UC2 560 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 TRIM22Q8IYM9 498 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 KIAA0319LQ8IZA0 1049 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 TBCKQ8TEA7 893 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 GDPD5Q8WTR4 605 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 LINC01599Q8WXQ3 324 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 APBB2Q92870 758 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 IL17RAQ96F46 866 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 TGS1Q96RS0 853 aaKnown RBP11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 CDHR5Q9HBB8 845 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 GJB4Q9NTQ9 266 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 TBC1D22BQ9NU19 505 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 KCNJ14Q9UNX9 436 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 INSL6Q9Y581 213 aa11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 MAFBQ9Y5Q3 323 aaPredicted RBP11.84□□□□□ -0.51
PRPF40B-204ENST00000527253 BRWD1Q9NSI6 2320 aa11.83□□□□□ -0.51
PRPF40B-204ENST00000527253 SMIM35A0A1B0GVV1 85 aa11.83□□□□□ -0.52
PRPF40B-204ENST00000527253 HBP1O60381 514 aa11.83□□□□□ -0.52
PRPF40B-204ENST00000527253 LARGE1O95461 756 aa11.83□□□□□ -0.52
PRPF40B-204ENST00000527253 TDP2O95551 362 aa11.83□□□□□ -0.52
PRPF40B-204ENST00000527253 SLC26A2P50443 739 aa11.83□□□□□ -0.52
PRPF40B-204ENST00000527253 AK2P54819 239 aa11.83□□□□□ -0.52
PRPF40B-204ENST00000527253 ANAPC15P60006 121 aa11.83□□□□□ -0.52
PRPF40B-204ENST00000527253 PDXDC2PQ6P474 469 aa11.83□□□□□ -0.52
PRPF40B-204ENST00000527253 TSHZ1Q6ZSZ6 1077 aa11.83□□□□□ -0.52
PRPF40B-204ENST00000527253 BLIDQ8IZY5 108 aa11.83□□□□□ -0.52
PRPF40B-204ENST00000527253 DAGLBQ8NCG7 672 aa11.83□□□□□ -0.52
PRPF40B-204ENST00000527253 SLC5A5Q92911 643 aa11.83□□□□□ -0.52
PRPF40B-204ENST00000527253 CELF4Q9BZC1 486 aaKnown RBP11.83□□□□□ -0.52
PRPF40B-204ENST00000527253 GABBR1Q9UBS5 961 aa11.83□□□□□ -0.52
PRPF40B-204ENST00000527253 PCDHA10Q9Y5I2 948 aa11.83□□□□□ -0.52
PRPF40B-204ENST00000527253 TRPV2Q9Y5S1 764 aa11.83□□□□□ -0.52
PRPF40B-204ENST00000527253 NCOR1O75376 2440 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 COL4A4P53420 1690 aaPredicted RBP11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 CYP3A7-CYP3A51PA0A087WV96 503 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 ZNF862O60290 1169 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 C22orf31O95567 290 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 LINC00271P0C7V0 271 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 FDPSP14324 419 aaKnown RBP11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 CYP3A7P24462 503 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 KRT76Q01546 638 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 UGCGQ16739 394 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 Q4G0T1 1027 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 TJAP1Q5JTD0 557 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 ZNF484Q5JVG2 852 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 IER5Q5VY09 327 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 TRMT1LQ7Z2T5 733 aaKnown RBP11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 CRIPAKQ8N1N5 446 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 NECAB1Q8N987 351 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 TMEM40Q8WWA1 233 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 MBOAT7Q96N66 472 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 ASB2Q96Q27 587 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 PHF20Q9BVI0 1012 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 SLKQ9H2G2 1235 aaPredicted RBP11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 TMX1Q9H3N1 280 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 UNC45AQ9H3U1 944 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 THEGQ9P2T0 379 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 TTC3P53804 2025 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 EVPLQ92817 2033 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 KDM3AQ9Y4C1 1321 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 LOXHD1Q8IVV2 1947 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 MYO7AQ13402 2215 aa11.82□□□□□ -0.52
PRPF40B-204ENST00000527253 COL1A2P08123 1366 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 VCANP13611 3396 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 GTPBP6O43824 516 aaPredicted RBP11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 PSMD10O75832 226 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 PSAPP07602 524 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 TFF2Q03403 129 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 ME3Q16798 604 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 INF2Q27J81 1249 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 TMEM266Q2M3C6 531 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 EARS2Q5JPH6 523 aaKnown RBP11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 CPLX2Q6PUV4 134 aaKnown RBP11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 B3GNT9Q6UX72 402 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 SMAP1Q8IYB5 467 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms