RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CEP290O15078 2479 aa14.52□□□□□ -0.09
SMPD1-202ENST00000526280 TREHO43280 583 aa14.51□□□□□ -0.09
SMPD1-202ENST00000526280 SLITRK3O94933 977 aa14.51□□□□□ -0.09
SMPD1-202ENST00000526280 STBD1O95210 358 aa14.51□□□□□ -0.09
SMPD1-202ENST00000526280 OATP04181 439 aa14.51□□□□□ -0.09
SMPD1-202ENST00000526280 CYP2C9P11712 490 aa14.51□□□□□ -0.09
SMPD1-202ENST00000526280 PRKCEQ02156 737 aa14.51□□□□□ -0.09
SMPD1-202ENST00000526280 PTPAQ15257 358 aa14.51□□□□□ -0.09
SMPD1-202ENST00000526280 MARCH8Q5T0T0 291 aa14.51□□□□□ -0.09
SMPD1-202ENST00000526280 IGSF22Q8N9C0 903 aa14.51□□□□□ -0.09
SMPD1-202ENST00000526280 DYDC2Q96IM9 177 aa14.51□□□□□ -0.09
SMPD1-202ENST00000526280 USP28Q96RU2 1077 aa14.51□□□□□ -0.09
SMPD1-202ENST00000526280 FTOQ9C0B1 505 aaKnown RBP eCLIP14.51□□□□□ -0.09
SMPD1-202ENST00000526280 PRDM5Q9NQX1 630 aaPredicted RBP14.51□□□□□ -0.09
SMPD1-202ENST00000526280 NRBP2Q9NSY0 501 aa14.51□□□□□ -0.09
SMPD1-202ENST00000526280 WRAP73Q9P2S5 460 aaPredicted RBP14.51□□□□□ -0.09
SMPD1-202ENST00000526280 PRKAG2Q9UGJ0 569 aa14.51□□□□□ -0.09
SMPD1-202ENST00000526280 ZMYND8Q9ULU4 1186 aaPredicted RBP14.51□□□□□ -0.09
SMPD1-202ENST00000526280 NOD1Q9Y239 953 aa14.51□□□□□ -0.09
SMPD1-202ENST00000526280 MBLAC1A4D2B0 266 aaPredicted RBP14.5□□□□□ -0.09
SMPD1-202ENST00000526280 ZBTB42B2RXF5 422 aa14.5□□□□□ -0.09
SMPD1-202ENST00000526280 H0YGN5 161 aa14.5□□□□□ -0.09
SMPD1-202ENST00000526280 DKC1O60832 514 aaKnown RBP eCLIP14.5□□□□□ -0.09
SMPD1-202ENST00000526280 SYN1P17600 705 aa14.5□□□□□ -0.09
SMPD1-202ENST00000526280 DDIT3P35638 169 aa14.5□□□□□ -0.09
SMPD1-202ENST00000526280 PTK7Q13308 1070 aa14.5□□□□□ -0.09
SMPD1-202ENST00000526280 CTTNQ14247 550 aaKnown RBP14.5□□□□□ -0.09
SMPD1-202ENST00000526280 XKR3Q5GH77 459 aa14.5□□□□□ -0.09
SMPD1-202ENST00000526280 ZNF484Q5JVG2 852 aa14.5□□□□□ -0.09
SMPD1-202ENST00000526280 TRMT1LQ7Z2T5 733 aaKnown RBP14.5□□□□□ -0.09
SMPD1-202ENST00000526280 SERINC5Q86VE9 423 aa14.5□□□□□ -0.09
SMPD1-202ENST00000526280 C4orf19Q8IY42 314 aa14.5□□□□□ -0.09
SMPD1-202ENST00000526280 NEK9Q8TD19 979 aa14.5□□□□□ -0.09
SMPD1-202ENST00000526280 DHX38Q92620 1227 aaKnown RBP14.5□□□□□ -0.09
SMPD1-202ENST00000526280 ZNF396Q96N95 335 aaPredicted RBP14.5□□□□□ -0.09
SMPD1-202ENST00000526280 LXNQ9BS40 222 aa14.5□□□□□ -0.09
SMPD1-202ENST00000526280 POLR3CQ9BUI4 534 aaPredicted RBP14.5□□□□□ -0.09
SMPD1-202ENST00000526280 NIFKQ9BYG3 293 aaKnown RBP14.5□□□□□ -0.09
SMPD1-202ENST00000526280 RAB34Q9BZG1 259 aa14.5□□□□□ -0.09
SMPD1-202ENST00000526280 ZSWIM4Q9H7M6 989 aa14.5□□□□□ -0.09
SMPD1-202ENST00000526280 LRWD1Q9UFC0 647 aa14.5□□□□□ -0.09
SMPD1-202ENST00000526280 COL1A2P08123 1366 aa14.5□□□□□ -0.09
SMPD1-202ENST00000526280 LYPLA2O95372 231 aa14.49□□□□□ -0.09
SMPD1-202ENST00000526280 TIMP1P01033 207 aa14.49□□□□□ -0.09
SMPD1-202ENST00000526280 SPATA31C1P0DKV0 1188 aa14.49□□□□□ -0.09
SMPD1-202ENST00000526280 ITGB8P26012 769 aa14.49□□□□□ -0.09
SMPD1-202ENST00000526280 NASPP49321 788 aaPredicted RBP14.49□□□□□ -0.09
SMPD1-202ENST00000526280 IGBP1P78318 339 aa14.49□□□□□ -0.09
SMPD1-202ENST00000526280 CYP4A11Q02928 519 aa14.49□□□□□ -0.09
SMPD1-202ENST00000526280 CEBPZQ03701 1054 aaKnown RBP14.49□□□□□ -0.09
SMPD1-202ENST00000526280 ANO5Q75V66 913 aa14.49□□□□□ -0.09
SMPD1-202ENST00000526280 CATSPER3Q86XQ3 398 aa14.49□□□□□ -0.09
SMPD1-202ENST00000526280 TPH2Q8IWU9 490 aa14.49□□□□□ -0.09
SMPD1-202ENST00000526280 ERMNQ8TAM6 284 aa14.49□□□□□ -0.09
SMPD1-202ENST00000526280 TRAPPC12Q8WVT3 735 aa14.49□□□□□ -0.09
SMPD1-202ENST00000526280 NOC4LQ9BVI4 516 aaKnown RBP14.49□□□□□ -0.09
SMPD1-202ENST00000526280 HIPK3Q9H422 1215 aa14.49□□□□□ -0.09
SMPD1-202ENST00000526280 TUFT1Q9NNX1 390 aa14.49□□□□□ -0.09
SMPD1-202ENST00000526280 TUBE1Q9UJT0 475 aa14.49□□□□□ -0.09
SMPD1-202ENST00000526280 MORC2Q9Y6X9 1032 aaPredicted RBP14.49□□□□□ -0.09
SMPD1-202ENST00000526280 VWA3AA6NCI4 1184 aa14.48□□□□□ -0.09
SMPD1-202ENST00000526280 DDX11L8A8MPP1 907 aa14.48□□□□□ -0.09
SMPD1-202ENST00000526280 RAG1P15918 1043 aa14.48□□□□□ -0.09
SMPD1-202ENST00000526280 KLRC1P26715 233 aa14.48□□□□□ -0.09
SMPD1-202ENST00000526280 RPA1P27694 616 aa14.48□□□□□ -0.09
SMPD1-202ENST00000526280 RBL2Q08999 1139 aa14.48□□□□□ -0.09
SMPD1-202ENST00000526280 BFSP2Q13515 415 aa14.48□□□□□ -0.09
SMPD1-202ENST00000526280 SLC39A14Q15043 492 aa14.48□□□□□ -0.09
SMPD1-202ENST00000526280 TARBP2Q15633 366 aaKnown RBP14.48□□□□□ -0.09
SMPD1-202ENST00000526280 TRIM71Q2Q1W2 868 aaKnown RBP14.48□□□□□ -0.09
SMPD1-202ENST00000526280 ATL3Q6DD88 541 aa14.48□□□□□ -0.09
SMPD1-202ENST00000526280 MTHFD1LQ6UB35 978 aa14.48□□□□□ -0.09
SMPD1-202ENST00000526280 CAGE1Q8TC20 777 aa14.48□□□□□ -0.09
SMPD1-202ENST00000526280 WNT8BQ93098 351 aa14.48□□□□□ -0.09
SMPD1-202ENST00000526280 TFIP11Q9UBB9 837 aaKnown RBP14.48□□□□□ -0.09
SMPD1-202ENST00000526280 PCDHA2Q9Y5H9 948 aa14.48□□□□□ -0.09
SMPD1-202ENST00000526280 STK24Q9Y6E0 443 aa14.48□□□□□ -0.09
SMPD1-202ENST00000526280 MYH15Q9Y2K3 1946 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 UMODL1Q5DID0 1318 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 TMEM150BA6NC51 233 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 PITPNM1O00562 1244 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 MED24O75448 989 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 MARCKSP29966 332 aaPredicted RBP14.47□□□□□ -0.09
SMPD1-202ENST00000526280 YWHABP31946 246 aaKnown RBP14.47□□□□□ -0.09
SMPD1-202ENST00000526280 CYP2C18P33260 490 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 NUCB2P80303 420 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 FOXD4L6Q3SYB3 417 aaPredicted RBP14.47□□□□□ -0.09
SMPD1-202ENST00000526280 HAUS3Q68CZ6 603 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 TAF2Q6P1X5 1199 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 FOXD4L3Q6VB84 417 aaPredicted RBP14.47□□□□□ -0.09
SMPD1-202ENST00000526280 RUFY4Q6ZNE9 571 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 RPAINQ86UA6 219 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 CCDC155Q8N6L0 562 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 LINC00301Q8NCQ3 95 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 ZBTB10Q96DT7 871 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 CEP89Q96ST8 783 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 PPP1R12CQ9BZL4 782 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 PCDH10Q9P2E7 1040 aa14.47□□□□□ -0.09
SMPD1-202ENST00000526280 SEPT9Q9UHD8 586 aaPredicted RBP14.47□□□□□ -0.09
SMPD1-202ENST00000526280 SMIM35A0A1B0GVV1 85 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms