RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 TAF2Q6P1X5 1199 aa13.89□□□□□ -0.19
CCS-202ENST00000525435 SERINC5Q86VE9 423 aa13.89□□□□□ -0.19
CCS-202ENST00000525435 CCDC155Q8N6L0 562 aa13.89□□□□□ -0.19
CCS-202ENST00000525435 CAGE1Q8TC20 777 aa13.89□□□□□ -0.19
CCS-202ENST00000525435 AK8Q96MA6 479 aa13.89□□□□□ -0.19
CCS-202ENST00000525435 EIF2AK1Q9BQI3 630 aaKnown RBP13.89□□□□□ -0.19
CCS-202ENST00000525435 POLR3CQ9BUI4 534 aaPredicted RBP13.89□□□□□ -0.19
CCS-202ENST00000525435 TUFT1Q9NNX1 390 aa13.89□□□□□ -0.19
CCS-202ENST00000525435 SETD4Q9NVD3 440 aa13.89□□□□□ -0.19
CCS-202ENST00000525435 TRPC6Q9Y210 931 aa13.89□□□□□ -0.19
CCS-202ENST00000525435 ATP6V1DQ9Y5K8 247 aa13.89□□□□□ -0.19
CCS-202ENST00000525435 TRIM43BA6NCK2 446 aa13.88□□□□□ -0.19
CCS-202ENST00000525435 MAGEB2O15479 319 aa13.88□□□□□ -0.19
CCS-202ENST00000525435 PARNO95453 639 aaKnown RBP13.88□□□□□ -0.19
CCS-202ENST00000525435 TIMP1P01033 207 aa13.88□□□□□ -0.19
CCS-202ENST00000525435 OATP04181 439 aa13.88□□□□□ -0.19
CCS-202ENST00000525435 RPA1P27694 616 aa13.88□□□□□ -0.19
CCS-202ENST00000525435 NUCB2P80303 420 aa13.88□□□□□ -0.19
CCS-202ENST00000525435 PRPF38BQ5VTL8 546 aaKnown RBP13.88□□□□□ -0.19
CCS-202ENST00000525435 HAUS3Q68CZ6 603 aa13.88□□□□□ -0.19
CCS-202ENST00000525435 OTUD6AQ7L8S5 288 aa13.88□□□□□ -0.19
CCS-202ENST00000525435 EXOC8Q8IYI6 725 aa13.88□□□□□ -0.19
CCS-202ENST00000525435 ZNF710Q8N1W2 664 aa13.88□□□□□ -0.19
CCS-202ENST00000525435 LMBR1Q8WVP7 490 aa13.88□□□□□ -0.19
CCS-202ENST00000525435 TRIM43Q96BQ3 446 aaPredicted RBP13.88□□□□□ -0.19
CCS-202ENST00000525435 CTAGE1Q96RT6 745 aa13.88□□□□□ -0.19
CCS-202ENST00000525435 LRWD1Q9UFC0 647 aa13.88□□□□□ -0.19
CCS-202ENST00000525435 CFAP45Q9UL16 551 aa13.88□□□□□ -0.19
CCS-202ENST00000525435 STBD1O95210 358 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 RAG1P15918 1043 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 DDIT3P35638 169 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 NASPP49321 788 aaPredicted RBP13.87□□□□□ -0.19
CCS-202ENST00000525435 PRKCEQ02156 737 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 HIC1Q14526 733 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 SLC39A14Q15043 492 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 PTPAQ15257 358 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 MARCH8Q5T0T0 291 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 TPH2Q8IWU9 490 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 NME8Q8N427 588 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 RETREG2Q8NC44 543 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 LBHD1Q9BQE6 289 aaPredicted RBP13.87□□□□□ -0.19
CCS-202ENST00000525435 LXNQ9BS40 222 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 NOC4LQ9BVI4 516 aaKnown RBP13.87□□□□□ -0.19
CCS-202ENST00000525435 HIPK3Q9H422 1215 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 ANKEF1Q9NU02 776 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 RGL1Q9NZL6 768 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 TUBE1Q9UJT0 475 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 PCDHA2Q9Y5H9 948 aa13.87□□□□□ -0.19
CCS-202ENST00000525435 POTEMA6NI47 508 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 DDX11L8A8MPP1 907 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 ZBTB42B2RXF5 422 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 H0YGN5 161 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 TREHO43280 583 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 SPATA31C1P0DKV0 1188 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 KLRC1P26715 233 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 LONP1P36776 959 aaKnown RBP13.86□□□□□ -0.19
CCS-202ENST00000525435 ZNF200P98182 395 aaPredicted RBP13.86□□□□□ -0.19
CCS-202ENST00000525435 PKP1Q13835 747 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 TARBP2Q15633 366 aaKnown RBP13.86□□□□□ -0.19
CCS-202ENST00000525435 IL17AQ16552 155 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 UGCGQ16739 394 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 KRT79Q5XKE5 535 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 MFSD5Q6N075 450 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 FAM173BQ6P4H8 233 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 FAM43BQ6ZT52 329 aaPredicted RBP13.86□□□□□ -0.19
CCS-202ENST00000525435 SH3RF1Q7Z6J0 888 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 RSPH3Q86UC2 560 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 CATSPER3Q86XQ3 398 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 BANK1Q8NDB2 785 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 DYDC2Q96IM9 177 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 NACC1Q96RE7 527 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 JPH2Q9BR39 696 aaPredicted RBP13.86□□□□□ -0.19
CCS-202ENST00000525435 PRDM5Q9NQX1 630 aaPredicted RBP13.86□□□□□ -0.19
CCS-202ENST00000525435 CIZ1Q9ULV3 898 aaPredicted RBP13.86□□□□□ -0.19
CCS-202ENST00000525435 ZDHHC9Q9Y397 364 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 SRPRBQ9Y5M8 271 aaKnown RBP13.86□□□□□ -0.19
CCS-202ENST00000525435 CLIC4Q9Y696 253 aa13.86□□□□□ -0.19
CCS-202ENST00000525435 SMIM35A0A1B0GVV1 85 aa13.85□□□□□ -0.19
CCS-202ENST00000525435 YEATS4O95619 227 aa13.85□□□□□ -0.19
CCS-202ENST00000525435 CYP2C9P11712 490 aa13.85□□□□□ -0.19
CCS-202ENST00000525435 YWHABP31946 246 aaKnown RBP13.85□□□□□ -0.19
CCS-202ENST00000525435 CDC42EP1Q00587 391 aa13.85□□□□□ -0.19
CCS-202ENST00000525435 CTTNQ14247 550 aaKnown RBP13.85□□□□□ -0.19
CCS-202ENST00000525435 TRIM71Q2Q1W2 868 aaKnown RBP13.85□□□□□ -0.19
CCS-202ENST00000525435 MTHFD1LQ6UB35 978 aa13.85□□□□□ -0.19
CCS-202ENST00000525435 ANO5Q75V66 913 aa13.85□□□□□ -0.19
CCS-202ENST00000525435 TMEM199Q8N511 208 aa13.85□□□□□ -0.19
CCS-202ENST00000525435 LINC00301Q8NCQ3 95 aa13.85□□□□□ -0.19
CCS-202ENST00000525435 USP28Q96RU2 1077 aa13.85□□□□□ -0.19
CCS-202ENST00000525435 CEP290O15078 2479 aa13.85□□□□□ -0.19
CCS-202ENST00000525435 VWA3AA6NCI4 1184 aa13.84□□□□□ -0.19
CCS-202ENST00000525435 PPP6R2O75170 966 aa13.84□□□□□ -0.19
CCS-202ENST00000525435 SELPP16109 830 aa13.84□□□□□ -0.19
CCS-202ENST00000525435 TMOD1P28289 359 aa13.84□□□□□ -0.19
CCS-202ENST00000525435 RFC2P35250 354 aa13.84□□□□□ -0.19
CCS-202ENST00000525435 IGBP1P78318 339 aa13.84□□□□□ -0.19
CCS-202ENST00000525435 CYP4A11Q02928 519 aa13.84□□□□□ -0.19
CCS-202ENST00000525435 TBC1D8BQ0IIM8 1120 aa13.84□□□□□ -0.19
CCS-202ENST00000525435 HYIQ5T013 277 aa13.84□□□□□ -0.19
CCS-202ENST00000525435 PPP1R13LQ8WUF5 828 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms