RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 CKAP2LQ8IYA6 745 aa17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 PIGOQ8TEQ8 1089 aa17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 LRRC15Q8TF66 581 aa17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 PCYT2Q99447 389 aa17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 SMARCAD1Q9H4L7 1026 aa17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 XPNPEP3Q9NQH7 507 aa17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 BLOC1S4Q9NUP1 217 aa17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 MAFBQ9Y5Q3 323 aaPredicted RBP17.69■□□□□ 0.42
TSPAN4-213ENST00000524895 A0A087WWV3 80 aa17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 ZNF862O60290 1169 aa17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 EYA4O95677 639 aa17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 OATP04181 439 aa17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 PLA2G4BP0C869 781 aa17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 ZNF286BP0CG31 522 aa17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 HOXD8P13378 290 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 YWHABP31946 246 aaKnown RBP17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 GJA9P57773 515 aa17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 PSMC6P62333 389 aa17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 DHX8Q14562 1220 aaKnown RBP17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 MCM6Q14566 821 aa17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 PKN2Q16513 984 aaKnown RBP17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 CAMK4Q16566 473 aa17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 SV2BQ7L1I2 683 aa17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 PLPPR4Q7Z2D5 763 aa17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 UPF3AQ9H1J1 476 aaKnown RBP17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 TNMDQ9H2S6 317 aa17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 TMEM63CQ9P1W3 806 aa17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 SEPT9Q9UHD8 586 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 ZNF215Q9UL58 517 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-213ENST00000524895 AFMP43652 599 aa17.67■□□□□ 0.42
TSPAN4-213ENST00000524895 SLC26A2P50443 739 aa17.67■□□□□ 0.42
TSPAN4-213ENST00000524895 BEX3Q00994 111 aa17.67■□□□□ 0.42
TSPAN4-213ENST00000524895 XKR3Q5GH77 459 aa17.67■□□□□ 0.42
TSPAN4-213ENST00000524895 OTUD6AQ7L8S5 288 aa17.67■□□□□ 0.42
TSPAN4-213ENST00000524895 TRMT1LQ7Z2T5 733 aaKnown RBP17.67■□□□□ 0.42
TSPAN4-213ENST00000524895 GRAMD1CQ8IYS0 662 aa17.67■□□□□ 0.42
TSPAN4-213ENST00000524895 PAGE5Q96GU1 130 aa17.67■□□□□ 0.42
TSPAN4-213ENST00000524895 FAM167AQ96KS9 214 aa17.67■□□□□ 0.42
TSPAN4-213ENST00000524895 LRRC27Q9C0I9 530 aa17.67■□□□□ 0.42
TSPAN4-213ENST00000524895 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.67■□□□□ 0.423e-6■■■■□ 23.5
TSPAN4-213ENST00000524895 BHMT2Q9H2M3 363 aa17.67■□□□□ 0.42
TSPAN4-213ENST00000524895 ERAP1Q9NZ08 941 aa17.67■□□□□ 0.42
TSPAN4-213ENST00000524895 DBR1Q9UK59 544 aaKnown RBP17.67■□□□□ 0.42
TSPAN4-213ENST00000524895 HTTP42858 3142 aa17.66■□□□□ 0.42
TSPAN4-213ENST00000524895 ARHGEF35A5YM69 484 aa17.66■□□□□ 0.42
TSPAN4-213ENST00000524895 ZBTB39O15060 712 aa17.66■□□□□ 0.42
TSPAN4-213ENST00000524895 CTAGE5O15320 804 aa17.66■□□□□ 0.42
TSPAN4-213ENST00000524895 PGK1P00558 417 aa17.66■□□□□ 0.42
TSPAN4-213ENST00000524895 MYL3P08590 195 aa17.66■□□□□ 0.42
TSPAN4-213ENST00000524895 XRCC6P12956 609 aaKnown RBP eCLIP17.66■□□□□ 0.42
TSPAN4-213ENST00000524895 MARK3P27448 753 aa17.66■□□□□ 0.42
TSPAN4-213ENST00000524895 AMPD3Q01432 767 aa17.66■□□□□ 0.42
TSPAN4-213ENST00000524895 POSTNQ15063 836 aa17.66■□□□□ 0.42
TSPAN4-213ENST00000524895 STAMQ92783 540 aa17.66■□□□□ 0.42
TSPAN4-213ENST00000524895 UNC93B1Q9H1C4 597 aa17.66■□□□□ 0.42
TSPAN4-213ENST00000524895 ANKEF1Q9NU02 776 aa17.66■□□□□ 0.42
TSPAN4-213ENST00000524895 KBTBD4Q9NVX7 518 aa17.66■□□□□ 0.42
TSPAN4-213ENST00000524895 LOXHD1Q8IVV2 1947 aa17.66■□□□□ 0.42
TSPAN4-213ENST00000524895 WDR81Q562E7 1941 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 TMEM150BA6NC51 233 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 MYADML2A6NDP7 307 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 ZEB2O60315 1214 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 ADAMTS4O75173 837 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 MYCNP04198 464 aaPredicted RBP17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 ATP4AP20648 1035 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 SLC12A3P55017 1021 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 IRX5P78411 483 aaPredicted RBP17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 XKR9Q5GH70 373 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 GNASQ5JWF2 1037 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 PLA2G4FQ68DD2 849 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 ANO5Q75V66 913 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 SH3RF1Q7Z6J0 888 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 GPBP1Q86WP2 473 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 ELOA2Q8IYF1 753 aaPredicted RBP17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 SYT2Q8N9I0 419 aaPredicted RBP17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 ATP8B4Q8TF62 1192 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 C16orf70Q9BSU1 422 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 NRBP2Q9NSY0 501 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 TRPC6Q9Y210 931 aa17.65■□□□□ 0.42
TSPAN4-213ENST00000524895 H3BRB1 525 aa17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 GTPBP6O43824 516 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 KPNA6O60684 536 aa17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 STBD1O95210 358 aa17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 MYCP01106 439 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 KRT18P05783 430 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 MYL1P05976 194 aa17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 PRR29P0C7W0 189 aa17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 CCL5P13501 91 aa17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 RARRES1P49788 294 aa17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 NKX3-2P78367 333 aa17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 PNOCQ13519 176 aa17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 PLCB4Q15147 1175 aa17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 RNF180Q86T96 592 aa17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 BBXQ8WY36 941 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 CEP170P1Q96L14 293 aa17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 MTRQ99707 1265 aa17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 TUT1Q9H6E5 874 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 BMP2KQ9NSY1 1161 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-213ENST00000524895 FRMPD3Q5JV73 1810 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms