RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 TMEM59LQ9UK28 342 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 ODF2LQ9ULJ1 636 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 USP17L15C9J2P7 530 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 USP17L13C9JLJ4 530 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 USP17L11C9JVI0 530 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 USP17L18D6R9N7 530 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 USP17L22D6RA61 530 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 USP17L17D6RBQ6 530 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 USP17L19D6RCP7 530 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 USP17L20D6RJB6 530 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 FGGP02679 453 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 MYBP10242 640 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 SNAP25P60880 206 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 USP17L24Q0WX57 530 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 SEMA3FQ13275 785 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 USP17L6PQ6QN14 398 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 PTF1AQ7RTS3 328 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 SCFD2Q8WU76 684 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 CCDC113Q9H0I3 377 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 BAIAP2L1Q9UHR4 511 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 NAGPAQ9UK23 515 aa14.38□□□□□ -0.11
CAPN1-202ENST00000524773 F8W031 263 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-202ENST00000524773 GFPT2O94808 682 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 NFIXQ14938 502 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 MEX3CQ5U5Q3 659 aaKnown RBP14.37□□□□□ -0.11
CAPN1-202ENST00000524773 CACNA2D3Q8IZS8 1091 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 TCP11Q8WWU5 503 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 RUBCNQ92622 972 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 ERVK-5Q9HDB9 667 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 MLXIPLQ9NP71 852 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 EMILIN3Q9NT22 766 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 SEPT11Q9NVA2 429 aaKnown RBP14.37□□□□□ -0.11
CAPN1-202ENST00000524773 DDX25Q9UHL0 483 aaKnown RBP14.37□□□□□ -0.11
CAPN1-202ENST00000524773 HDAC9Q9UKV0 1011 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 PGRMC1O00264 195 aaKnown RBP14.37□□□□□ -0.11
CAPN1-202ENST00000524773 BUB1BO60566 1050 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-202ENST00000524773 CTNND1O60716 968 aaKnown RBP14.37□□□□□ -0.11
CAPN1-202ENST00000524773 PPP1R11O60927 126 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-202ENST00000524773 UCHL3P15374 230 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 USP11P51784 963 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 IFI35P80217 286 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-202ENST00000524773 SNCBQ16143 134 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 PPP4R3AQ6IN85 833 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 GALNT17Q6IS24 598 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 TMC3Q7Z5M5 1100 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 LRRC57Q8N9N7 239 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 TPCN2Q8NHX9 752 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 HVCN1Q96D96 273 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 MYH4Q9Y623 1939 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 RSPH10B2B2RC85 870 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 RSPH10BP0C881 870 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 RFC4P35249 363 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 ADCY7P51828 1080 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 PPP1R7Q15435 360 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 HIBCHQ6NVY1 386 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-202ENST00000524773 TMOD4Q9NZQ9 345 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 STK17AQ9UEE5 414 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 SNX24Q9Y343 169 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 RTCBQ9Y3I0 505 aaKnown RBP14.37□□□□□ -0.11
CAPN1-202ENST00000524773 L3MBTL1Q9Y468 752 aa14.37□□□□□ -0.11
CAPN1-202ENST00000524773 DLEC1Q9Y238 1755 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 IGSF9BQ9UPX0 1349 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 MYH14Q7Z406 1995 aaKnown RBP14.36□□□□□ -0.11
CAPN1-202ENST00000524773 SPDYE3A6NKU9 549 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 PLA2G4BP0C869 781 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 BTDP43251 543 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 PLTPP55058 493 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 PABPC4Q13310 644 aaKnown RBP eCLIP14.36□□□□□ -0.117e-7■■□□□ 12
CAPN1-202ENST00000524773 KCTD1Q719H9 257 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 PNMA8AQ86V59 439 aaPredicted RBP14.36□□□□□ -0.11
CAPN1-202ENST00000524773 RNF14Q9UBS8 474 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 MCM8Q9UJA3 840 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 PPP1R9AQ9ULJ8 1098 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 PCDHA12Q9UN75 941 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 PCDHB13Q9Y5F0 798 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 CD2APQ9Y5K6 639 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 CLTAP09496 248 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 POLD1P28340 1107 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 NF2P35240 595 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 DDR1Q08345 913 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 MGARPQ8TDB4 240 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.36□□□□□ -0.112e-7■■■□□ 16.5
CAPN1-202ENST00000524773 SPZ1Q9BXG8 430 aa14.36□□□□□ -0.11
CAPN1-202ENST00000524773 F8VZ95 297 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 CHN1P15882 459 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 ELF1P32519 619 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 FXR2P51116 673 aaKnown RBP eCLIP14.35□□□□□ -0.111e-6■■■□□ 14.6
CAPN1-202ENST00000524773 CYP4A11Q02928 519 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 LRRC14Q15048 493 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 SF3B3Q15393 1217 aaKnown RBP14.35□□□□□ -0.11
CAPN1-202ENST00000524773 YTHDF3Q7Z739 585 aaKnown RBP14.35□□□□□ -0.11
CAPN1-202ENST00000524773 TBC1D1Q86TI0 1168 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-202ENST00000524773 GLYCTKQ8IVS8 523 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 RIC8AQ9NPQ8 531 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 LUC7LQ9NQ29 371 aaKnown RBP14.35□□□□□ -0.11
CAPN1-202ENST00000524773 TMEM110-MUSTN1A8MSY1 372 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 PAX7P23759 505 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 PON1P27169 355 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 PPP1R2P41236 205 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 SHROOM1Q2M3G4 852 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms