RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 NSMFQ6X4W1 530 aa4.45□□□□□ -1.7
CSDE1-208ENST00000524652 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.45□□□□□ -1.7
CSDE1-208ENST00000524652 IFNL3Q8IZI9 196 aa4.45□□□□□ -1.7
CSDE1-208ENST00000524652 OSBP2Q969R2 916 aa4.45□□□□□ -1.7
CSDE1-208ENST00000524652 CD248Q9HCU0 757 aa4.45□□□□□ -1.7
CSDE1-208ENST00000524652 RBPJLQ9UBG7 517 aa4.45□□□□□ -1.7
CSDE1-208ENST00000524652 ST6GALNAC2Q9UJ37 374 aa4.45□□□□□ -1.7
CSDE1-208ENST00000524652 ZFYVE16Q7Z3T8 1539 aa4.45□□□□□ -1.7
CSDE1-208ENST00000524652 PTPRKQ15262 1439 aa4.45□□□□□ -1.7
CSDE1-208ENST00000524652 RRBP1Q9P2E9 1410 aaKnown RBP4.45□□□□□ -1.7
CSDE1-208ENST00000524652 DIP2CQ9Y2E4 1556 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 MAST1Q9Y2H9 1570 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 FAM47E-STBD1D6RA91 191 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 PRODHO43272 600 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 SOD2P04179 222 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 ZXDAP98168 799 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 GRIN1Q05586 938 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 IFRD2Q12894 506 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-208ENST00000524652 ICAM4Q14773 271 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 NTRK3Q16288 839 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 SKIDA1Q1XH10 827 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 KCNT2Q6UVM3 1135 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 KCTD1Q719H9 257 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 RALYLQ86SE5 291 aaKnown RBP4.44□□□□□ -1.7
CSDE1-208ENST00000524652 KISS1RQ969F8 398 aaPredicted RBP4.44□□□□□ -1.7
CSDE1-208ENST00000524652 ALG1Q9BT22 464 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 MEGF9Q9H1U4 602 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 DSEQ9UL01 958 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 POGZQ7Z3K3 1410 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 MIA2Q96PC5 1412 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 SCAPERQ9BY12 1400 aa4.44□□□□□ -1.7
CSDE1-208ENST00000524652 ATP7AQ04656 1500 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 ARHGEF40Q8TER5 1519 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 GCC2Q8IWJ2 1684 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 PATE3B3GLJ2 98 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 NKRFO15226 690 aaKnown RBP eCLIP4.43□□□□□ -1.7
CSDE1-208ENST00000524652 B4GALT4O60513 344 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 FBXO21O94952 628 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 RAPGEF3O95398 923 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 KNG1P01042 644 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 ENO2P09104 434 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-208ENST00000524652 HNRNPMP52272 730 aaKnown RBP eCLIP4.43□□□□□ -1.7
CSDE1-208ENST00000524652 Q6ZUG5 572 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 REXO1L1PQ8IX06 675 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 NUDT10Q8NFP7 164 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 NUDT11Q96G61 164 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 KCNJ15Q99712 375 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 TRIM55Q9BYV6 548 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 KLC2Q9H0B6 622 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 JADE2Q9NQC1 790 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 KCND1Q9NSA2 647 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 ARHGAP20Q9P2F6 1191 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 ZFP69BQ9UJL9 534 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 ZDHHC9Q9Y397 364 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 TELO2Q9Y4R8 837 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 DAPK1P53355 1430 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 YEATS2Q9ULM3 1422 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 KIAA1107Q9UPP5 1409 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 PLXNC1O60486 1568 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 DENND4BO75064 1496 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-208ENST00000524652 ZNF518AQ6AHZ1 1483 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 CCDC141Q6ZP82 1450 aa4.43□□□□□ -1.7
CSDE1-208ENST00000524652 ZNF839A8K0R7 811 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 WNT9AO14904 365 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 ABCC5O15440 1437 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 LTFP02788 710 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 CKMP06732 381 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 COL6A2P12110 1019 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 SELENOPP49908 381 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 CDSNQ15517 529 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 BCORL1Q5H9F3 1711 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 EFCAB2Q5VUJ9 269 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 MAMDC2Q7Z304 686 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-208ENST00000524652 RBM12BQ8IXT5 1001 aaKnown RBP4.42□□□□□ -1.7
CSDE1-208ENST00000524652 AJUBAQ96IF1 538 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 KATNBL1Q9H079 304 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 SEMA4AQ9H3S1 761 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 IPPKQ9H8X2 491 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 SEC61A2Q9H9S3 476 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 CFDP1Q9UEE9 299 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-208ENST00000524652 MSRB2Q9Y3D2 182 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 SLC4A7Q9Y6M7 1214 aa4.42□□□□□ -1.7
CSDE1-208ENST00000524652 CEP152O94986 1710 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 CFAP65Q6ZU64 1925 aaKnown RBP4.41□□□□□ -1.7
CSDE1-208ENST00000524652 AQP7O14520 342 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 AKAP8O43823 692 aaKnown RBP4.41□□□□□ -1.7
CSDE1-208ENST00000524652 CNOT4O95628 575 aaKnown RBP4.41□□□□□ -1.7
CSDE1-208ENST00000524652 PFKPQ01813 784 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 PHF19Q5T6S3 580 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 YOD1Q5VVQ6 348 aaPredicted RBP4.41□□□□□ -1.7
CSDE1-208ENST00000524652 CKAP2LQ8IYA6 745 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 IFNL2Q8IZJ0 200 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 NLGN4XQ8N0W4 816 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 AFAP1Q8N556 730 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 STPG3Q8N7X2 389 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 SH3RF3Q8TEJ3 882 aaPredicted RBP4.41□□□□□ -1.7
CSDE1-208ENST00000524652 ZNF428Q96B54 188 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 SPATA9Q9BWV2 254 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 DEF6Q9H4E7 631 aa4.41□□□□□ -1.7
CSDE1-208ENST00000524652 IGSF5Q9NSI5 407 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms