RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 XPO4Q9C0E2 1151 aaKnown RBP8.41□□□□□ -1.06
CTR9-202ENST00000524523 THAP9Q9H5L6 903 aa8.41□□□□□ -1.06
CTR9-202ENST00000524523 FANCLQ9NW38 375 aa8.41□□□□□ -1.06
CTR9-202ENST00000524523 TMEM260Q9NX78 707 aa8.41□□□□□ -1.06
CTR9-202ENST00000524523 GPRC5DQ9NZD1 345 aa8.41□□□□□ -1.06
CTR9-202ENST00000524523 BAZ2BQ9UIF8 2168 aaKnown RBP8.41□□□□□ -1.06
CTR9-202ENST00000524523 MYH8P13535 1937 aa8.41□□□□□ -1.06
CTR9-202ENST00000524523 A0A1B0GTH6 734 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 USP17L15C9J2P7 530 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 USP17L13C9JLJ4 530 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 USP17L11C9JVI0 530 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 USP17L18D6R9N7 530 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 USP17L22D6RA61 530 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 USP17L17D6RBQ6 530 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 USP17L19D6RCP7 530 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 USP17L20D6RJB6 530 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 KIF2AO00139 706 aaPredicted RBP8.4□□□□□ -1.06
CTR9-202ENST00000524523 ATP2A1O14983 1001 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 MAFGO15525 162 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 KLRC4O43908 158 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 PLCG1P19174 1290 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 EEF1GP26641 437 aaKnown RBP8.4□□□□□ -1.06
CTR9-202ENST00000524523 RPA1P27694 616 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 LMOD1P29536 600 aaPredicted RBP8.4□□□□□ -1.06
CTR9-202ENST00000524523 HSD17B4P51659 736 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 SETQ01105 290 aaPredicted RBP8.4□□□□□ -1.06
CTR9-202ENST00000524523 USP17L24Q0WX57 530 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 C4orf17Q53FE4 359 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 SPECC1LQ69YQ0 1117 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 USP17L6PQ6QN14 398 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 UNC13DQ70J99 1090 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 RASGRP2Q7LDG7 609 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 FCHSD1Q86WN1 690 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 VSTM4Q8IW00 320 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 FAM114A1Q8IWE2 563 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 ETNPPLQ8TBG4 499 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 ACER1Q8TDN7 264 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 RAD54LQ92698 747 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 SLF1Q9BQI6 1058 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 POLR3CQ9BUI4 534 aaPredicted RBP8.4□□□□□ -1.06
CTR9-202ENST00000524523 IFNKQ9P0W0 207 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 LIMA1Q9UHB6 759 aaKnown RBP8.4□□□□□ -1.06
CTR9-202ENST00000524523 HACL1Q9UJ83 578 aa8.4□□□□□ -1.06
CTR9-202ENST00000524523 BRCA1P38398 1863 aaKnown RBP8.4□□□□□ -1.07
CTR9-202ENST00000524523 ITIH6Q6UXX5 1313 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 UNCXA6NJT0 531 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 OPLAHO14841 1288 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 SLC37A4O43826 429 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 TDP2O95551 362 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 F11P03951 625 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 SFPQP23246 707 aaKnown RBP eCLIP8.39□□□□□ -1.07
CTR9-202ENST00000524523 CCNE1P24864 410 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 ECE1P42892 770 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 BACE1P56817 501 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 LRRC63Q05C16 580 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 FMR1Q06787 632 aaKnown RBP eCLIP8.39□□□□□ -1.07
CTR9-202ENST00000524523 EHHADHQ08426 723 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 TBX2Q13207 712 aaPredicted RBP8.39□□□□□ -1.07
CTR9-202ENST00000524523 GRB10Q13322 594 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 TRIM14Q14142 442 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 UBE2SQ16763 222 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 TKFCQ3LXA3 575 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 FAM83BQ5T0W9 1011 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 FOXR1Q6PIV2 292 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 ARHGAP27Q6ZUM4 889 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 MIGA2Q7L4E1 593 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 LDHDQ86WU2 507 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 SCYL3Q8IZE3 742 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 GUF1Q8N442 669 aaKnown RBP8.39□□□□□ -1.07
CTR9-202ENST00000524523 GPR161Q8N6U8 529 aaKnown RBP8.39□□□□□ -1.07
CTR9-202ENST00000524523 SPC24Q8NBT2 197 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 NEK9Q8TD19 979 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 CCDC51Q96ER9 411 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 PRIMPOLQ96LW4 560 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 RIT2Q99578 217 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 WDR11Q9BZH6 1224 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 PPP1R12CQ9BZL4 782 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 TMX1Q9H3N1 280 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 SLC38A10Q9HBR0 1119 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 TUFT1Q9NNX1 390 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 PICK1Q9NRD5 415 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 BLOC1S4Q9NUP1 217 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 EXOC1Q9NV70 894 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 DNAAF2Q9NVR5 837 aaKnown RBP8.39□□□□□ -1.07
CTR9-202ENST00000524523 HOXC10Q9NYD6 342 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 KCND2Q9NZV8 630 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 ADD3Q9UEY8 706 aaKnown RBP8.39□□□□□ -1.07
CTR9-202ENST00000524523 ADAMTS5Q9UNA0 930 aa8.39□□□□□ -1.07
CTR9-202ENST00000524523 MAFBQ9Y5Q3 323 aaPredicted RBP8.39□□□□□ -1.07
CTR9-202ENST00000524523 ADAMTSL1Q8N6G6 1762 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 SYNRGQ9UMZ2 1314 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 A0A1W2PQC6 194 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 A6NJY4 79 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 MEIS1O00470 390 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 STX10O60499 249 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 ZBED4O75132 1171 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 TPM2P07951 284 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 PTGS1P23219 599 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 CDC25AP30304 524 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 PRCPP42785 496 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms