RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 MMS22LQ6ZRQ5 1243 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 ANKRD35Q8N283 1001 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 PROCA1Q8NCQ7 364 aaPredicted RBP14.95□□□□□ -0.02
SYNPO-205ENST00000522122 AP1M1Q9BXS5 423 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 CPSF2Q9P2I0 782 aaKnown RBP14.95□□□□□ -0.02
SYNPO-205ENST00000522122 ANKFY1Q9P2R3 1169 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 GIPC1O14908 333 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 EIF3BP55884 814 aaKnown RBP14.94□□□□□ -0.02
SYNPO-205ENST00000522122 MRPS25P82663 173 aaKnown RBP14.94□□□□□ -0.02
SYNPO-205ENST00000522122 GRAPQ13588 217 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 PROM2Q8N271 834 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 GRAPLQ8TC17 118 aaPredicted RBP14.94□□□□□ -0.02
SYNPO-205ENST00000522122 NRBP2Q9NSY0 501 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 PCDHB4Q9Y5E5 795 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 PDS5AQ29RF7 1337 aaKnown RBP14.94□□□□□ -0.02
SYNPO-205ENST00000522122 LRRC53A6NM62 1247 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 TMOD1P28289 359 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 PSMD6Q15008 389 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 NTRK3Q16288 839 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 SYDE2Q5VT97 1194 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 TAB3Q8N5C8 712 aaPredicted RBP14.94□□□□□ -0.02
SYNPO-205ENST00000522122 PPP4R1Q8TF05 950 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 FAM81BQ96LP2 452 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 CHP1Q99653 195 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 MINPP1Q9UNW1 487 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 COL9A3Q14050 684 aaPredicted RBP14.94□□□□□ -0.02
SYNPO-205ENST00000522122 CDC37Q16543 378 aaPredicted RBP14.94□□□□□ -0.02
SYNPO-205ENST00000522122 ICE2Q659A1 982 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 HESX1Q9UBX0 185 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 TOPAZ1Q8N9V7 1692 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 SORBS3O60504 671 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 SNX1Q13596 522 aa14.94□□□□□ -0.02
SYNPO-205ENST00000522122 SRBD1Q8N5C6 995 aaKnown RBP14.94□□□□□ -0.02
SYNPO-205ENST00000522122 NMT2O60551 498 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 ZRANB2O95218 330 aaKnown RBP eCLIP14.93□□□□□ -0.02
SYNPO-205ENST00000522122 PPP2R5AQ15172 486 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 CYP4F22Q6NT55 531 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 KMT5AQ9NQR1 393 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 TTLL3Q9Y4R7 772 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 POTEMA6NI47 508 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 CD44P16070 742 aaKnown RBP14.93□□□□□ -0.02
SYNPO-205ENST00000522122 SARSP49591 514 aaKnown RBP14.93□□□□□ -0.02
SYNPO-205ENST00000522122 SLC12A2P55011 1212 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 ERVK-24P63145 666 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 CDKAL1Q5VV42 579 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 KSR1Q8IVT5 923 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 SH3RF3Q8TEJ3 882 aaPredicted RBP14.93□□□□□ -0.02
SYNPO-205ENST00000522122 BCAP29Q9UHQ4 241 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 ARHGAP42A6NI28 874 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 RASGRF2O14827 1237 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 ZBTB22O15209 634 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 STAT2P52630 851 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 DR1Q01658 176 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 ZKSCAN8Q15776 578 aaPredicted RBP14.93□□□□□ -0.02
SYNPO-205ENST00000522122 WDR93Q6P2C0 686 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 TCP11Q8WWU5 503 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 MXD3Q9BW11 206 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 ACTR5Q9H9F9 607 aaPredicted RBP14.93□□□□□ -0.02
SYNPO-205ENST00000522122 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.93□□□□□ -0.02
SYNPO-205ENST00000522122 SRP68Q9UHB9 627 aaKnown RBP14.93□□□□□ -0.02
SYNPO-205ENST00000522122 ANAPC5Q9UJX4 755 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 SNX12Q9UMY4 172 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 PALMO75781 387 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 RHOBTB3O94955 611 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 SLCO1A2P46721 670 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 TBC1D10BQ4KMP7 808 aaPredicted RBP14.93□□□□□ -0.02
SYNPO-205ENST00000522122 NFRKBQ6P4R8 1299 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 MAP7D3Q8IWC1 876 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 ADPGKQ9BRR6 497 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 CPVLQ9H3G5 476 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 PCDHA6Q9UN73 950 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 PCDHA8Q9Y5H6 950 aa14.93□□□□□ -0.02
SYNPO-205ENST00000522122 CLRN2A0PK11 232 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 CA8P35219 290 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 TXNRD1Q16881 649 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 ARHGEF18Q6ZSZ5 1173 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 ANKZF1Q9H8Y5 726 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 DBNDD1Q9H9R9 158 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 A0A1W2PQJ5 194 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 YWHAGP61981 247 aaKnown RBP eCLIP14.92□□□□□ -0.02
SYNPO-205ENST00000522122 SLC7A3Q8WY07 619 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 BARHL2Q9NY43 387 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 H7C0C1 242 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 ATP5OP48047 213 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 TTBK2Q6IQ55 1244 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 SEPT14Q6ZU15 432 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 TRIM50Q86XT4 487 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 RAD54LQ92698 747 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 MRPL47Q9HD33 250 aaKnown RBP14.92□□□□□ -0.02
SYNPO-205ENST00000522122 TRIM10Q9UDY6 481 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 RGPD1P0DJD0 1748 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 CNTNAP5Q8WYK1 1306 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 SGK1O00141 431 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 INHBAP08476 426 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 CCNI2Q6ZMN8 369 aaPredicted RBP14.92□□□□□ -0.02
SYNPO-205ENST00000522122 TRAPPC11Q7Z392 1133 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 RHOT2Q8IXI1 618 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 NOA1Q8NC60 698 aaKnown RBP14.92□□□□□ -0.02
SYNPO-205ENST00000522122 KLHL29Q96CT2 875 aa14.92□□□□□ -0.02
SYNPO-205ENST00000522122 CEP170P1Q96L14 293 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms