RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 MBTPS1Q14703 1052 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 ASPRV1Q53RT3 343 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 ZNF618Q5T7W0 954 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 SLC30A10Q6XR72 485 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 GAS2L3Q86XJ1 694 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 FBXO11Q86XK2 927 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 RAB11FIP4Q86YS3 637 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 ELOA2Q8IYF1 753 aaPredicted RBP12.3□□□□□ -0.44
MRPS28-208ENST00000521605 SRBD1Q8N5C6 995 aaKnown RBP12.3□□□□□ -0.44
MRPS28-208ENST00000521605 DAGLBQ8NCG7 672 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 SCFD2Q8WU76 684 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 AFG1LQ8WV93 481 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 SAMD11Q96NU1 681 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 CLSTN2Q9H4D0 955 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 TLR9Q9NR96 1032 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 MAD2L2Q9UI95 211 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 CEP131Q9UPN4 1083 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 LINC01565O15544 149 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 NMT2O60551 498 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 TBX10O75333 385 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 ARIH2O95376 493 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 PLEKHA8P1O95397 391 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 XRCC6P12956 609 aaKnown RBP eCLIP12.29□□□□□ -0.44
MRPS28-208ENST00000521605 CMA1P23946 247 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 GTF2F1P35269 517 aaKnown RBP eCLIP12.29□□□□□ -0.44
MRPS28-208ENST00000521605 ZXDAP98168 799 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 FAM160A1Q05DH4 1040 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 HYAL1Q12794 435 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 SMAD4Q13485 552 aaKnown RBP12.29□□□□□ -0.44
MRPS28-208ENST00000521605 GNL2Q13823 731 aaKnown RBP12.29□□□□□ -0.44
MRPS28-208ENST00000521605 STK38Q15208 465 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 PTPAQ15257 358 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 UVSSAQ2YD98 709 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 ASCL5Q7RTU5 278 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 C7orf31Q8N865 590 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 ZNF579Q8NAF0 562 aaKnown RBP12.29□□□□□ -0.44
MRPS28-208ENST00000521605 ENGASEQ8NFI3 743 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 CCDC148Q8NFR7 591 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 DBF4BQ8NFT6 615 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 CCDC12Q8WUD4 166 aaPredicted RBP12.29□□□□□ -0.44
MRPS28-208ENST00000521605 WNT8BQ93098 351 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 FUCA2Q9BTY2 467 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 NUP62CLQ9H1M0 184 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 TSPY26PQ9H489 355 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 ALG13Q9NP73 1137 aaKnown RBP12.29□□□□□ -0.44
MRPS28-208ENST00000521605 HDAC6Q9UBN7 1215 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 GTF2IRD1Q9UHL9 959 aa12.29□□□□□ -0.44
MRPS28-208ENST00000521605 V9GY48 417 aaPredicted RBP12.29□□□□□ -0.44
MRPS28-208ENST00000521605 NLRC5Q86WI3 1866 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 ESYT2A0FGR8 921 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 SYCE3A1L190 88 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 NCK2O43639 380 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 DTNBO60941 627 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 ICAM1P05362 532 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 MMP3P08254 477 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 CTNNB1P35222 781 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 KRT2P35908 639 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 RBL2Q08999 1139 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 CTC1Q2NKJ3 1217 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 TRAF7Q6Q0C0 670 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 CCDC73Q6ZRK6 1079 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 SESTD1Q86VW0 696 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 MRPS27Q92552 414 aaKnown RBP12.28□□□□□ -0.44
MRPS28-208ENST00000521605 KAT2BQ92831 832 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 TNFRSF25Q93038 417 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 GMCL1Q96IK5 515 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 TIGD1Q96MW7 591 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 AIFM3Q96NN9 605 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 CD207Q9UJ71 328 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 STX8Q9UNK0 236 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 DMDP11532 3685 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 COL4A6Q14031 1691 aa12.28□□□□□ -0.44
MRPS28-208ENST00000521605 ATG2AQ2TAZ0 1938 aa12.27□□□□□ -0.44
MRPS28-208ENST00000521605 MICAL3Q7RTP6 2002 aa12.27□□□□□ -0.44
MRPS28-208ENST00000521605 GRM6O15303 877 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 CUTAO60888 179 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 PARP1P09874 1014 aaKnown RBP12.27□□□□□ -0.45
MRPS28-208ENST00000521605 LIG1P18858 919 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 SLC16A2P36021 539 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 ME1P48163 572 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 NDUFV1P49821 464 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 ZNF200P98182 395 aaPredicted RBP12.27□□□□□ -0.45
MRPS28-208ENST00000521605 ORC2Q13416 577 aaPredicted RBP12.27□□□□□ -0.45
MRPS28-208ENST00000521605 SF3A1Q15459 793 aaKnown RBP12.27□□□□□ -0.45
MRPS28-208ENST00000521605 NPY5RQ15761 445 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 CCDC96Q2M329 555 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 AXDND1Q5T1B0 1012 aaPredicted RBP12.27□□□□□ -0.45
MRPS28-208ENST00000521605 GPATCH4Q5T3I0 446 aaKnown RBP12.27□□□□□ -0.45
MRPS28-208ENST00000521605 PPP1R18Q6NYC8 613 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 RNF207Q6ZRF8 634 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 ERMP1Q7Z2K6 904 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 BICD2Q8TD16 824 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 MPHOSPH6Q99547 160 aaKnown RBP12.27□□□□□ -0.45
MRPS28-208ENST00000521605 RIOX1Q9H6W3 641 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 DACT1Q9NYF0 836 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 NOL7Q9UMY1 257 aaKnown RBP12.27□□□□□ -0.45
MRPS28-208ENST00000521605 PCDHA7Q9UN72 937 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 PLXNA3P51805 1871 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 MYH6P13533 1939 aa12.27□□□□□ -0.45
MRPS28-208ENST00000521605 DCHS1Q96JQ0 3298 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms