RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 CNOT4O95628 575 aaKnown RBP6.54□□□□□ -1.36
SKP1-207ENST00000520417 MMEP08473 750 aa6.54□□□□□ -1.36
SKP1-207ENST00000520417 POLD1P28340 1107 aa6.54□□□□□ -1.36
SKP1-207ENST00000520417 KCNQ1P51787 676 aa6.54□□□□□ -1.36
SKP1-207ENST00000520417 TMEM132BQ14DG7 1078 aa6.54□□□□□ -1.36
SKP1-207ENST00000520417 OTOP2Q7RTS6 562 aa6.54□□□□□ -1.36
SKP1-207ENST00000520417 REXO1L1PQ8IX06 675 aa6.54□□□□□ -1.36
SKP1-207ENST00000520417 HIPK4Q8NE63 616 aa6.54□□□□□ -1.36
SKP1-207ENST00000520417 ERCC4Q92889 916 aaPredicted RBP6.54□□□□□ -1.36
SKP1-207ENST00000520417 MKL1Q969V6 931 aa6.54□□□□□ -1.36
SKP1-207ENST00000520417 OSBPL2Q9H1P3 480 aa6.54□□□□□ -1.36
SKP1-207ENST00000520417 CDC42EP3Q9UKI2 254 aa6.54□□□□□ -1.36
SKP1-207ENST00000520417 IL13RA1P78552 427 aa6.53□□□□□ -1.36
SKP1-207ENST00000520417 LACTBP83111 547 aaPredicted RBP6.53□□□□□ -1.36
SKP1-207ENST00000520417 NOLC1Q14978 699 aaKnown RBP eCLIP6.53□□□□□ -1.36
SKP1-207ENST00000520417 C2orf27AQ580R0 203 aa6.53□□□□□ -1.36
SKP1-207ENST00000520417 FGD2Q7Z6J4 655 aa6.53□□□□□ -1.36
SKP1-207ENST00000520417 LILRB2Q8N423 598 aa6.53□□□□□ -1.36
SKP1-207ENST00000520417 C2orf69Q8N8R5 385 aa6.53□□□□□ -1.36
SKP1-207ENST00000520417 IGSF22Q8N9C0 903 aa6.53□□□□□ -1.36
SKP1-207ENST00000520417 GSTCDQ8NEC7 633 aa6.53□□□□□ -1.36
SKP1-207ENST00000520417 SH3RF3Q8TEJ3 882 aaPredicted RBP6.53□□□□□ -1.36
SKP1-207ENST00000520417 SCLYQ96I15 445 aa6.53□□□□□ -1.36
SKP1-207ENST00000520417 KLC2Q9H0B6 622 aa6.53□□□□□ -1.36
SKP1-207ENST00000520417 GALNT8Q9NY28 637 aa6.53□□□□□ -1.36
SKP1-207ENST00000520417 TCAF1Q9Y4C2 921 aa6.53□□□□□ -1.36
SKP1-207ENST00000520417 SLC4A7Q9Y6M7 1214 aa6.53□□□□□ -1.36
SKP1-207ENST00000520417 SLC12A8A0AV02 714 aa6.52□□□□□ -1.37
SKP1-207ENST00000520417 PRAMEF22A3QJZ6 481 aa6.52□□□□□ -1.37
SKP1-207ENST00000520417 CUTAO60888 179 aa6.52□□□□□ -1.37
SKP1-207ENST00000520417 HIP1RO75146 1068 aa6.52□□□□□ -1.37
SKP1-207ENST00000520417 HMGCRP04035 888 aa6.52□□□□□ -1.37
SKP1-207ENST00000520417 AOAHP28039 575 aa6.52□□□□□ -1.37
SKP1-207ENST00000520417 SEC23AQ15436 765 aa6.52□□□□□ -1.37
SKP1-207ENST00000520417 LRSAM1Q6UWE0 723 aa6.52□□□□□ -1.37
SKP1-207ENST00000520417 TAX1BP1Q86VP1 789 aa6.52□□□□□ -1.37
SKP1-207ENST00000520417 CELF4Q9BZC1 486 aaKnown RBP6.52□□□□□ -1.37
SKP1-207ENST00000520417 KATNBL1Q9H079 304 aa6.52□□□□□ -1.37
SKP1-207ENST00000520417 MEGF9Q9H1U4 602 aa6.52□□□□□ -1.37
SKP1-207ENST00000520417 C12orf65Q9H3J6 166 aaKnown RBP6.52□□□□□ -1.37
SKP1-207ENST00000520417 CCDC163A0A0D9SF12 145 aa6.51□□□□□ -1.37
SKP1-207ENST00000520417 TCRBV16S1A1N1A0A5B0 115 aa6.51□□□□□ -1.37
SKP1-207ENST00000520417 ZNF623O75123 536 aa6.51□□□□□ -1.37
SKP1-207ENST00000520417 RAPGEF3O95398 923 aa6.51□□□□□ -1.37
SKP1-207ENST00000520417 RAC3P60763 192 aa6.51□□□□□ -1.37
SKP1-207ENST00000520417 HERVK_113P62684 666 aa6.51□□□□□ -1.37
SKP1-207ENST00000520417 TOP3AQ13472 1001 aaPredicted RBP6.51□□□□□ -1.37
SKP1-207ENST00000520417 FSTL4Q6MZW2 842 aa6.51□□□□□ -1.37
SKP1-207ENST00000520417 SPRED1Q7Z699 444 aa6.51□□□□□ -1.37
SKP1-207ENST00000520417 SREK1Q8WXA9 508 aaKnown RBP6.51□□□□□ -1.37
SKP1-207ENST00000520417 NEIL1Q96FI4 390 aaPredicted RBP6.51□□□□□ -1.37
SKP1-207ENST00000520417 GBP4Q96PP9 640 aa6.51□□□□□ -1.37
SKP1-207ENST00000520417 CDK5RAP1Q96SZ6 601 aaKnown RBP6.51□□□□□ -1.37
SKP1-207ENST00000520417 MRPL4Q9BYD3 311 aaKnown RBP6.51□□□□□ -1.37
SKP1-207ENST00000520417 KRTAP3-1Q9BYR8 98 aa6.51□□□□□ -1.37
SKP1-207ENST00000520417 TMPRSS5Q9H3S3 457 aa6.51□□□□□ -1.37
SKP1-207ENST00000520417 SEC61A2Q9H9S3 476 aa6.51□□□□□ -1.37
SKP1-207ENST00000520417 KCNH7Q9NS40 1196 aa6.51□□□□□ -1.37
SKP1-207ENST00000520417 CDK11AQ9UQ88 783 aaPredicted RBP6.51□□□□□ -1.37
SKP1-207ENST00000520417 FOXP2O15409 715 aa6.5□□□□□ -1.37
SKP1-207ENST00000520417 ECE1P42892 770 aa6.5□□□□□ -1.37
SKP1-207ENST00000520417 CD83Q01151 205 aa6.5□□□□□ -1.37
SKP1-207ENST00000520417 NFE2L2Q16236 605 aa6.5□□□□□ -1.37
SKP1-207ENST00000520417 TM4SF20Q53R12 229 aa6.5□□□□□ -1.37
SKP1-207ENST00000520417 TRIM61Q5EBN2 209 aa6.5□□□□□ -1.37
SKP1-207ENST00000520417 ZMAT1Q5H9K5 638 aa6.5□□□□□ -1.37
SKP1-207ENST00000520417 OVCH1Q7RTY7 1134 aa6.5□□□□□ -1.37
SKP1-207ENST00000520417 NOSTRINQ8IVI9 506 aa6.5□□□□□ -1.37
SKP1-207ENST00000520417 ASB15Q8WXK1 588 aa6.5□□□□□ -1.37
SKP1-207ENST00000520417 MRFAP1L1Q96HT8 127 aa6.5□□□□□ -1.37
SKP1-207ENST00000520417 C1QTNF3Q9BXJ4 246 aa6.5□□□□□ -1.37
SKP1-207ENST00000520417 KIAA1683Q9H0B3 1180 aa6.5□□□□□ -1.37
SKP1-207ENST00000520417 NCOA5Q9HCD5 579 aaKnown RBP6.5□□□□□ -1.37
SKP1-207ENST00000520417 BTBD7Q9P203 1132 aa6.5□□□□□ -1.37
SKP1-207ENST00000520417 FAM184BQ9ULE4 1060 aa6.5□□□□□ -1.37
SKP1-207ENST00000520417 NR2E1Q9Y466 385 aa6.5□□□□□ -1.37
SKP1-207ENST00000520417 CDC14BO60729 498 aa6.49□□□□□ -1.37
SKP1-207ENST00000520417 MEOX1P50221 254 aa6.49□□□□□ -1.37
SKP1-207ENST00000520417 IRF9Q00978 393 aa6.49□□□□□ -1.37
SKP1-207ENST00000520417 RNF151Q2KHN1 245 aa6.49□□□□□ -1.37
SKP1-207ENST00000520417 TMEM177Q53S58 311 aa6.49□□□□□ -1.37
SKP1-207ENST00000520417 HS1BP3Q53T59 392 aa6.49□□□□□ -1.37
SKP1-207ENST00000520417 TCTN3Q6NUS6 607 aa6.49□□□□□ -1.37
SKP1-207ENST00000520417 ABHD17CQ6PCB6 329 aa6.49□□□□□ -1.37
SKP1-207ENST00000520417 RTKN2Q8IZC4 609 aa6.49□□□□□ -1.37
SKP1-207ENST00000520417 BTBD2Q9BX70 525 aa6.49□□□□□ -1.37
SKP1-207ENST00000520417 AMNQ9BXJ7 453 aa6.49□□□□□ -1.37
SKP1-207ENST00000520417 ZSWIM4Q9H7M6 989 aa6.49□□□□□ -1.37
SKP1-207ENST00000520417 CD248Q9HCU0 757 aa6.49□□□□□ -1.37
SKP1-207ENST00000520417 ZFR2Q9UPR6 939 aaKnown RBP6.49□□□□□ -1.37
SKP1-207ENST00000520417 PATE3B3GLJ2 98 aa6.48□□□□□ -1.37
SKP1-207ENST00000520417 MUSKO15146 869 aa6.48□□□□□ -1.37
SKP1-207ENST00000520417 MATN3O15232 486 aa6.48□□□□□ -1.37
SKP1-207ENST00000520417 FOXS1O43638 330 aa6.48□□□□□ -1.37
SKP1-207ENST00000520417 OPA1O60313 960 aa6.48□□□□□ -1.37
SKP1-207ENST00000520417 ETV4P43268 484 aa6.48□□□□□ -1.37
SKP1-207ENST00000520417 SELENOPP49908 381 aa6.48□□□□□ -1.37
SKP1-207ENST00000520417 ZXDAP98168 799 aa6.48□□□□□ -1.37
SKP1-207ENST00000520417 FILIP1Q7Z7B0 1213 aa6.48□□□□□ -1.37
SKP1-207ENST00000520417 DDX53Q86TM3 631 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms