RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 GRAMD1CQ8IYS0 662 aa5.68□□□□□ -1.5
SDC2-204ENST00000519914 AGGF1Q8N302 714 aaeCLIP5.68□□□□□ -1.5
SDC2-204ENST00000519914 DHX58Q96C10 678 aa5.68□□□□□ -1.5
SDC2-204ENST00000519914 AK8Q96MA6 479 aa5.68□□□□□ -1.5
SDC2-204ENST00000519914 RTFDC1Q9BY42 306 aaPredicted RBP5.68□□□□□ -1.5
SDC2-204ENST00000519914 ZMYND12Q9H0C1 365 aa5.68□□□□□ -1.5
SDC2-204ENST00000519914 ZNF287Q9HBT7 754 aa5.68□□□□□ -1.5
SDC2-204ENST00000519914 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.68□□□□□ -1.5
SDC2-204ENST00000519914 SAMSN1Q9NSI8 373 aaKnown RBP5.68□□□□□ -1.5
SDC2-204ENST00000519914 KBTBD4Q9NVX7 518 aa5.68□□□□□ -1.5
SDC2-204ENST00000519914 TRMT1Q9NXH9 659 aaKnown RBP5.68□□□□□ -1.5
SDC2-204ENST00000519914 BARHL2Q9NY43 387 aa5.68□□□□□ -1.5
SDC2-204ENST00000519914 SRP68Q9UHB9 627 aaKnown RBP5.68□□□□□ -1.5
SDC2-204ENST00000519914 SUGT1Q9Y2Z0 365 aa5.68□□□□□ -1.5
SDC2-204ENST00000519914 SPATA31A6Q5VVP1 1343 aa5.68□□□□□ -1.5
SDC2-204ENST00000519914 FAM205AQ6ZU69 1335 aa5.68□□□□□ -1.5
SDC2-204ENST00000519914 MYO3BQ8WXR4 1341 aa5.68□□□□□ -1.5
SDC2-204ENST00000519914 A0A1W2PQC6 194 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 TSPY2A6NKD2 308 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 H7C1D1 291 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 STXBP3O00186 592 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 KLRC4O43908 158 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 MFAP3LO75121 409 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 RHOBTB3O94955 611 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 ZRANB2O95218 330 aaKnown RBP eCLIP5.67□□□□□ -1.5
SDC2-204ENST00000519914 CYP2D6P10635 497 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 HMGB2P26583 209 aaKnown RBP5.67□□□□□ -1.5
SDC2-204ENST00000519914 HOXA10P31260 410 aaPredicted RBP5.67□□□□□ -1.5
SDC2-204ENST00000519914 SSTR4P31391 388 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 TFAP4Q01664 338 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 ZNF174Q15697 407 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 ZNF827Q17R98 1081 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 FILIP1LQ4L180 1135 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 NAALADL2Q58DX5 795 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 NOM1Q5C9Z4 860 aaKnown RBP5.67□□□□□ -1.5
SDC2-204ENST00000519914 COX20Q5RI15 118 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 CNNM4Q6P4Q7 775 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 RSRC2Q7L4I2 434 aaKnown RBP5.67□□□□□ -1.5
SDC2-204ENST00000519914 ZNF804AQ7Z570 1209 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 DZIP1Q86YF9 867 aaKnown RBP5.67□□□□□ -1.5
SDC2-204ENST00000519914 CNGA4Q8IV77 575 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 ADSSL1Q8N142 457 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 CCDC82Q8N4S0 544 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 MSL3Q8N5Y2 521 aaKnown RBP5.67□□□□□ -1.5
SDC2-204ENST00000519914 NOC3LQ8WTT2 800 aaKnown RBP5.67□□□□□ -1.5
SDC2-204ENST00000519914 TBC1D22AQ8WUA7 517 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 CCDC12Q8WUD4 166 aaPredicted RBP5.67□□□□□ -1.5
SDC2-204ENST00000519914 MYO19Q96H55 970 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 KAT14Q9H8E8 782 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 DISC1Q9NRI5 854 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 PCMTD2Q9NV79 361 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 TMEM51Q9NW97 253 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 MCM9Q9NXL9 1143 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 TFCP2L1Q9NZI6 479 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 MYO1AQ9UBC5 1043 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 CCNL1Q9UK58 526 aaPredicted RBP5.67□□□□□ -1.5
SDC2-204ENST00000519914 RNF112Q9ULX5 631 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 PCDHA6Q9UN73 950 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 PCDHA8Q9Y5H6 950 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 MRFAP1Q9Y605 127 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 ZNF646O15015 1829 aaPredicted RBP5.67□□□□□ -1.5
SDC2-204ENST00000519914 ATAD5Q96QE3 1844 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 ANKRD31Q8N7Z5 1873 aa5.67□□□□□ -1.5
SDC2-204ENST00000519914 IGKV6D-41A0A0C4DH26 115 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 TEX33O43247 280 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 SLC26A4O43511 780 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 CYTH3O43739 400 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 NMT2O60551 498 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 PRMT3O60678 531 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 BBOX1O75936 387 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 RPN1P04843 607 aaKnown RBP5.66□□□□□ -1.5
SDC2-204ENST00000519914 CCDC175P0C221 793 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 SNHG28P0DPA3 235 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 VEGFAP15692 232 aaPredicted RBP5.66□□□□□ -1.5
SDC2-204ENST00000519914 EEF1GP26641 437 aaKnown RBP5.66□□□□□ -1.5
SDC2-204ENST00000519914 COPB1P53618 953 aaKnown RBP5.66□□□□□ -1.5
SDC2-204ENST00000519914 RHBDL3P58872 404 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 GABPAQ06546 454 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 PAK1Q13153 545 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 NAA30Q147X3 362 aaPredicted RBP5.66□□□□□ -1.5
SDC2-204ENST00000519914 NFIXQ14938 502 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 ELF2Q15723 593 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 FAM47AQ5JRC9 791 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 WWC2Q6AWC2 1192 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 FBXO38Q6PIJ6 1188 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 PIK3AP1Q6ZUJ8 805 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 KRTAP1-3Q8IUG1 177 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 TMTC1Q8IUR5 882 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 AMOTL1Q8IY63 956 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 PDILTQ8N807 584 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 IGSF22Q8N9C0 903 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 GIMAP8Q8ND71 665 aaPredicted RBP5.66□□□□□ -1.5
SDC2-204ENST00000519914 SH3RF3Q8TEJ3 882 aaPredicted RBP5.66□□□□□ -1.5
SDC2-204ENST00000519914 IQCDQ96DY2 449 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 DHTKD1Q96HY7 919 aaPredicted RBP5.66□□□□□ -1.5
SDC2-204ENST00000519914 CRAMP1Q96RY5 1269 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 C7orf25Q9BPX7 421 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 TMEM47Q9BQJ4 181 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 UBXN6Q9BZV1 441 aa5.66□□□□□ -1.5
SDC2-204ENST00000519914 MRPL18Q9H0U6 180 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms