RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 SLC5A4Q9NY91 659 aa16.7■□□□□ 0.26
TRAPPC9-205ENST00000518839 IMPACTQ9P2X3 320 aa16.7■□□□□ 0.26
TRAPPC9-205ENST00000518839 MAGEC2Q9UBF1 373 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC9-205ENST00000518839 PCDHA2Q9Y5H9 948 aa16.7■□□□□ 0.26
TRAPPC9-205ENST00000518839 ADGRA2Q96PE1 1338 aa16.7■□□□□ 0.26
TRAPPC9-205ENST00000518839 KIF3CO14782 793 aa16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 ATG7O95352 703 aa16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 SUPT20HL2P0C7V6 817 aa16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 UBA1P22314 1058 aaKnown RBP16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 EEF1GP26641 437 aaKnown RBP16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 ADORA2AP29274 412 aa16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 RARRES1P49788 294 aa16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 FSTL1Q12841 308 aa16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 TAF1CQ15572 869 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 PADI6Q6TGC4 694 aa16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 ABHD15Q6UXT9 468 aa16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 PPP4R3CPQ6ZMV5 832 aa16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 GPR142Q7Z601 462 aa16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 PLEKHH3Q7Z736 793 aa16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 R3HDMLQ9H3Y0 253 aa16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 PARVGQ9HBI0 331 aa16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 GABBR1Q9UBS5 961 aa16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 LIMA1Q9UHB6 759 aaKnown RBP16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 UBE4BO95155 1302 aa16.69■□□□□ 0.26
TRAPPC9-205ENST00000518839 SLC15A5A6NIM6 579 aa16.68■□□□□ 0.26
TRAPPC9-205ENST00000518839 TMEM88BA6NKF7 163 aa16.68■□□□□ 0.26
TRAPPC9-205ENST00000518839 ZNF131P52739 623 aa16.68■□□□□ 0.26
TRAPPC9-205ENST00000518839 RAD51AP2Q09MP3 1159 aa16.68■□□□□ 0.26
TRAPPC9-205ENST00000518839 GRB14Q14449 540 aa16.68■□□□□ 0.26
TRAPPC9-205ENST00000518839 METTL7BQ6UX53 244 aa16.68■□□□□ 0.26
TRAPPC9-205ENST00000518839 CYFIP1Q7L576 1253 aa16.68■□□□□ 0.26
TRAPPC9-205ENST00000518839 SFR1Q86XK3 245 aa16.68■□□□□ 0.26
TRAPPC9-205ENST00000518839 IFNL1Q8IU54 200 aa16.68■□□□□ 0.26
TRAPPC9-205ENST00000518839 CSGALNACT2Q8N6G5 542 aa16.68■□□□□ 0.26
TRAPPC9-205ENST00000518839 SPC24Q8NBT2 197 aa16.68■□□□□ 0.26
TRAPPC9-205ENST00000518839 HPS3Q969F9 1004 aa16.68■□□□□ 0.26
TRAPPC9-205ENST00000518839 VTA1Q9NP79 307 aa16.68■□□□□ 0.26
TRAPPC9-205ENST00000518839 ABT1Q9ULW3 272 aaKnown RBP16.68■□□□□ 0.26
TRAPPC9-205ENST00000518839 IGSF9BQ9UPX0 1349 aa16.68■□□□□ 0.26
TRAPPC9-205ENST00000518839 A0A1B0GTH6 734 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 TRIM49BA6NDI0 452 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 LRRC10BA6NIK2 292 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 KCNJ18B7U540 433 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 IGF2BP3O00425 579 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 BACH1O14867 736 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 EIF3DO15371 548 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 FARP2O94887 1054 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 TPM2P07951 284 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 MAPTP10636 758 aaKnown RBP16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 GSDMDP57764 484 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 SP2Q02086 613 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 CACNB1Q02641 598 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 ALCAMQ13740 583 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 KCNJ12Q14500 433 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 TTLL4Q14679 1199 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 UGCGQ16739 394 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 BMT2Q1RMZ1 405 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 XKR3Q5GH77 459 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 TCP11X2Q5H9J9 407 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 FAM160B1Q5W0V3 765 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 ANKRD40Q6AI12 368 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 SWSAP1Q6NVH7 229 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 ARMCX2Q7L311 632 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 DPP9Q86TI2 863 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 MSL3Q8N5Y2 521 aaKnown RBP16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 SLC17A8Q8NDX2 589 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 SCFD2Q8WU76 684 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 DRC1Q96MC2 740 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 DUSP9Q99956 384 aaKnown RBP16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 SRRTQ9BXP5 876 aaKnown RBP16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 SEMA6BQ9H3T3 888 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 ZFYVE28Q9HCC9 887 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 ZNF302Q9NR11 478 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 DDX41Q9UJV9 622 aaKnown RBP16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 SYNGAP1Q96PV0 1343 aa16.67■□□□□ 0.26
TRAPPC9-205ENST00000518839 IGKV6D-21A0A0A0MT36 114 aa16.66■□□□□ 0.26
TRAPPC9-205ENST00000518839 ZBTB39O15060 712 aa16.66■□□□□ 0.26
TRAPPC9-205ENST00000518839 TOMM70O94826 608 aa16.66■□□□□ 0.26
TRAPPC9-205ENST00000518839 GGPS1O95749 300 aa16.66■□□□□ 0.26
TRAPPC9-205ENST00000518839 PMS1P54277 932 aaKnown RBP16.66■□□□□ 0.26
TRAPPC9-205ENST00000518839 XKR9Q5GH70 373 aa16.66■□□□□ 0.26
TRAPPC9-205ENST00000518839 MAMDC4Q6UXC1 1216 aa16.66■□□□□ 0.26
TRAPPC9-205ENST00000518839 MYCT1Q8N699 235 aa16.66■□□□□ 0.26
TRAPPC9-205ENST00000518839 SEPT1Q8WYJ6 367 aa16.66■□□□□ 0.26
TRAPPC9-205ENST00000518839 MRPL44Q9H9J2 332 aaKnown RBP16.66■□□□□ 0.26
TRAPPC9-205ENST00000518839 MLXIPQ9HAP2 919 aa16.66■□□□□ 0.26
TRAPPC9-205ENST00000518839 LARSQ9P2J5 1176 aaKnown RBP16.66■□□□□ 0.26
TRAPPC9-205ENST00000518839 FAM155AB1AL88 458 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC9-205ENST00000518839 RSPH10B2B2RC85 870 aa16.65■□□□□ 0.26
TRAPPC9-205ENST00000518839 TLR2O60603 784 aa16.65■□□□□ 0.26
TRAPPC9-205ENST00000518839 COBLO75128 1261 aa16.65■□□□□ 0.26
TRAPPC9-205ENST00000518839 HIP1RO75146 1068 aa16.65■□□□□ 0.26
TRAPPC9-205ENST00000518839 RSPH10BP0C881 870 aa16.65■□□□□ 0.26
TRAPPC9-205ENST00000518839 SP4Q02446 784 aa16.65■□□□□ 0.26
TRAPPC9-205ENST00000518839 IRF5Q13568 498 aa16.65■□□□□ 0.26
TRAPPC9-205ENST00000518839 NR1I3Q14994 352 aa16.65■□□□□ 0.26
TRAPPC9-205ENST00000518839 LRRC41Q15345 812 aa16.65■□□□□ 0.26
TRAPPC9-205ENST00000518839 EDRF1Q3B7T1 1238 aa16.65■□□□□ 0.26
TRAPPC9-205ENST00000518839 HSP90AA4PQ58FG1 418 aa16.65■□□□□ 0.26
TRAPPC9-205ENST00000518839 CELF3Q5SZQ8 465 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms