RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 SMIM24O75264 130 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 ADAMTS2O95450 1211 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 GHRP10912 638 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 GAP43P17677 238 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 KLRC1P26715 233 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 PMS1P54277 932 aaKnown RBP7.22□□□□□ -1.25
CPNE3-203ENST00000517490 PDIA5Q14554 519 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 NAALADL2Q58DX5 795 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 EARS2Q5JPH6 523 aaKnown RBP7.22□□□□□ -1.25
CPNE3-203ENST00000517490 CCDC62Q6P9F0 684 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 VPS52Q8N1B4 723 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 SH3GL2Q99962 352 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 SERPINA10Q9UK55 444 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 MRC1P22897 1456 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 SLIT3O75094 1523 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 USP17L3A6NCW0 530 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 USP17L4A6NCW7 530 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 FANCGO15287 622 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 GSTA1P08263 222 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 CYP2D6P10635 497 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 ATF2P15336 505 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 CHRNA3P32297 505 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 ADCY8P40145 1251 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 CAPRIN2Q6IMN6 1127 aaKnown RBP7.22□□□□□ -1.25
CPNE3-203ENST00000517490 USP17L1Q7RTZ2 530 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 FAM186BQ8IYM0 893 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 FBXO41Q8TF61 875 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 RAPGEF5Q92565 580 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 ECT2Q9H8V3 914 aa7.22□□□□□ -1.25
CPNE3-203ENST00000517490 CHN1P15882 459 aa7.21□□□□□ -1.25
CPNE3-203ENST00000517490 RNASELQ05823 741 aaKnown RBP7.21□□□□□ -1.25
CPNE3-203ENST00000517490 KLHDC7AQ5VTJ3 777 aa7.21□□□□□ -1.25
CPNE3-203ENST00000517490 HPS3Q969F9 1004 aa7.21□□□□□ -1.25
CPNE3-203ENST00000517490 SPDL1Q96EA4 605 aa7.21□□□□□ -1.25
CPNE3-203ENST00000517490 TLR10Q9BXR5 811 aa7.21□□□□□ -1.25
CPNE3-203ENST00000517490 ATP6V0A4Q9HBG4 840 aa7.21□□□□□ -1.25
CPNE3-203ENST00000517490 NOD2Q9HC29 1040 aa7.21□□□□□ -1.25
CPNE3-203ENST00000517490 FRMPD2Q68DX3 1309 aaPredicted RBP7.21□□□□□ -1.25
CPNE3-203ENST00000517490 ATRNO75882 1429 aa7.21□□□□□ -1.25
CPNE3-203ENST00000517490 LMTK3Q96Q04 1460 aa7.21□□□□□ -1.25
CPNE3-203ENST00000517490 CES2O00748 559 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 SH3BGRP55822 239 aaPredicted RBP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 EIF6P56537 245 aaKnown RBP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 ITIH4Q14624 930 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 PREPLQ4J6C6 727 aaPredicted RBP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 ANKRD20A8PQ5CZ79 823 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 MEI1Q5TIA1 1274 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 CENPPQ6IPU0 288 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 DYNLL2Q96FJ2 89 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 ACSBG1Q96GR2 724 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 TMEM47Q9BQJ4 181 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 BSDC1Q9NW68 430 aaPredicted RBP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 DDX20Q9UHI6 824 aaKnown RBP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 RGPD1P0DJD0 1748 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 POTEMA6NI47 508 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 MYMKA6NI61 221 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 KIF3CO14782 793 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 TTI1O43156 1089 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 CCND1P24385 295 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 GJC1P36383 396 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 PLCB3Q01970 1234 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 MKRN3Q13064 507 aaKnown RBP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 SBK1Q52WX2 424 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 LIN9Q5TKA1 542 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 PHLDB3Q6NSJ2 640 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 TRPM8Q7Z2W7 1104 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 LRRC8CQ8TDW0 803 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 ZC3H15Q8WU90 426 aaKnown RBP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 ZKSCAN4Q969J2 545 aaPredicted RBP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 GJA10Q969M2 543 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 GBP5Q96PP8 586 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 DUSP9Q99956 384 aaKnown RBP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 A1CFQ9NQ94 594 aaKnown RBP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 PTPN22Q9Y2R2 807 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 TNS3Q68CZ2 1445 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 RNF225M0QZC1 329 aaPredicted RBP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 BACH1O14867 736 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 CYP2J2P51589 502 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 MYL7Q01449 175 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 CACNB1Q02641 598 aaPredicted RBP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 PLS1Q14651 629 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 MESDQ14696 234 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 DDB1Q16531 1140 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 USP17L2Q6R6M4 530 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 APTXQ7Z2E3 356 aaKnown RBP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 FRMD5Q7Z6J6 570 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 ACTRT1Q8TDG2 376 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 RFFLQ8WZ73 363 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 THOC1Q96FV9 657 aaKnown RBP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 SUCLA2Q9P2R7 463 aaPredicted RBP7.21□□□□□ -1.26
CPNE3-203ENST00000517490 PNMA2Q9UL42 364 aa7.21□□□□□ -1.26
CPNE3-203ENST00000517490 LRRC37A3O60309 1634 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 SATB1Q01826 763 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 MTMR8Q96EF0 704 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 CDCA7Q9BWT1 371 aaPredicted RBP7.2□□□□□ -1.26
CPNE3-203ENST00000517490 HOMER2Q9NSB8 354 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 BTG4Q9NY30 223 aa7.2□□□□□ -1.26
CPNE3-203ENST00000517490 ZNF804BA4D1E1 1349 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms