RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 ODF2Q5BJF6 829 aa14.12□□□□□ -0.15
PHF3-212ENST00000515594 DPY19L2P1Q6NXN4 242 aa14.12□□□□□ -0.15
PHF3-212ENST00000515594 DAAM2Q86T65 1068 aa14.12□□□□□ -0.15
PHF3-212ENST00000515594 CATSPER3Q86XQ3 398 aa14.12□□□□□ -0.15
PHF3-212ENST00000515594 CCDC65Q8IXS2 484 aa14.12□□□□□ -0.15
PHF3-212ENST00000515594 PROM2Q8N271 834 aa14.12□□□□□ -0.15
PHF3-212ENST00000515594 CNBD1Q8NA66 436 aa14.12□□□□□ -0.15
PHF3-212ENST00000515594 CUL5Q93034 780 aa14.12□□□□□ -0.15
PHF3-212ENST00000515594 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
PHF3-212ENST00000515594 NOVA2Q9UNW9 492 aaKnown RBP14.12□□□□□ -0.15
PHF3-212ENST00000515594 FNTAP49354 379 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 COG2Q14746 738 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 PALB2Q86YC2 1186 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 ABCB11O95342 1321 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 PNMA6FA0A0J9YX94 578 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 CETN3O15182 167 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 TNNC1P63316 161 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 NFIAQ12857 509 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 PSMD2Q13200 908 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 SEMA3FQ13275 785 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 EXOC3L4Q17RC7 722 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 NBPF9Q3BBW0 867 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 GLE1Q53GS7 698 aaKnown RBP14.11□□□□□ -0.15
PHF3-212ENST00000515594 LRRC57Q8N9N7 239 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 PIGOQ8TEQ8 1089 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 RGL1Q9NZL6 768 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 AIPL1Q9NZN9 384 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 H0YGN5 161 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 HOXA13P31271 388 aaPredicted RBP14.11□□□□□ -0.15
PHF3-212ENST00000515594 CLK2P49760 499 aaKnown RBP14.11□□□□□ -0.15
PHF3-212ENST00000515594 PDE4CQ08493 712 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 SF3B2Q13435 895 aaKnown RBP14.11□□□□□ -0.15
PHF3-212ENST00000515594 ZC2HC1CQ53FD0 456 aaPredicted RBP14.11□□□□□ -0.15
PHF3-212ENST00000515594 PEX26Q7Z412 305 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 GLYCTKQ8IVS8 523 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 IQCDQ96DY2 449 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 DHX36Q9H2U1 1008 aaKnown RBP14.11□□□□□ -0.15
PHF3-212ENST00000515594 TMBIM4Q9HC24 238 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 SEPT11Q9NVA2 429 aaKnown RBP14.11□□□□□ -0.15
PHF3-212ENST00000515594 ARMCX3Q9UH62 379 aaPredicted RBP14.11□□□□□ -0.15
PHF3-212ENST00000515594 TSKSQ9UJT2 592 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 LEMD3Q9Y2U8 911 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 NFS1Q9Y697 457 aa14.11□□□□□ -0.15
PHF3-212ENST00000515594 PHF20L1A8MW92 1017 aa14.1□□□□□ -0.15
PHF3-212ENST00000515594 DDX3XO00571 662 aaKnown RBP eCLIP14.1□□□□□ -0.153e-11■■■■■ 28.8
PHF3-212ENST00000515594 USP11P51784 963 aa14.1□□□□□ -0.15
PHF3-212ENST00000515594 SLC12A3P55017 1021 aa14.1□□□□□ -0.15
PHF3-212ENST00000515594 QRICH1Q2TAL8 776 aa14.1□□□□□ -0.15
PHF3-212ENST00000515594 TPCN2Q8NHX9 752 aa14.1□□□□□ -0.15
PHF3-212ENST00000515594 RPGRQ92834 1020 aaKnown RBP14.1□□□□□ -0.15
PHF3-212ENST00000515594 GLG1Q92896 1179 aa14.1□□□□□ -0.15
PHF3-212ENST00000515594 RUSC1Q9BVN2 902 aa14.1□□□□□ -0.15
PHF3-212ENST00000515594 TAS2R14Q9NYV8 317 aa14.1□□□□□ -0.15
PHF3-212ENST00000515594 GCNT4Q9P109 453 aa14.1□□□□□ -0.15
PHF3-212ENST00000515594 TMEM59LQ9UK28 342 aa14.1□□□□□ -0.15
PHF3-212ENST00000515594 LOC102724159A0A0B4J2E5 919 aa14.1□□□□□ -0.15
PHF3-212ENST00000515594 HSPA9P38646 679 aaKnown RBP14.1□□□□□ -0.15
PHF3-212ENST00000515594 PWP2Q15269 919 aaKnown RBP14.1□□□□□ -0.15
PHF3-212ENST00000515594 PPP4R3AQ6IN85 833 aa14.1□□□□□ -0.15
PHF3-212ENST00000515594 SAMD1Q6SPF0 538 aaPredicted RBP14.1□□□□□ -0.15
PHF3-212ENST00000515594 JPH2Q9BR39 696 aaPredicted RBP14.1□□□□□ -0.15
PHF3-212ENST00000515594 ATP8A1Q9Y2Q0 1164 aa14.1□□□□□ -0.15
PHF3-212ENST00000515594 PCDHA1Q9Y5I3 950 aa14.1□□□□□ -0.15
PHF3-212ENST00000515594 ADAMTSL1Q8N6G6 1762 aa14.1□□□□□ -0.15
PHF3-212ENST00000515594 GCOM1H8Y6P7 765 aaPredicted RBP14.09□□□□□ -0.15
PHF3-212ENST00000515594 GCNT3O95395 438 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 MYZAPP0CAP1 466 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 MAGOHP61326 146 aaKnown RBP14.09□□□□□ -0.15
PHF3-212ENST00000515594 ACTN3Q08043 901 aaPredicted RBP14.09□□□□□ -0.15
PHF3-212ENST00000515594 GIT2Q14161 759 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 ASPRV1Q53RT3 343 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 MCTP2Q6DN12 878 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 CERS5Q8N5B7 392 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 RDH13Q8NBN7 331 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 SCFD2Q8WU76 684 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 MAGOHBQ96A72 148 aaKnown RBP14.09□□□□□ -0.15
PHF3-212ENST00000515594 CYFIP2Q96F07 1278 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 ISCUQ9H1K1 167 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 BHMT2Q9H2M3 363 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 ERVK-5Q9HDB9 667 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 PPP1R9AQ9ULJ8 1098 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 CNTNAP4Q9C0A0 1308 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 CHMP2AO43633 222 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 FGGP02679 453 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 SHBGP04278 402 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 UBXN2AP68543 259 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 DHX9Q08211 1270 aaKnown RBP14.09□□□□□ -0.15
PHF3-212ENST00000515594 PLS1Q14651 629 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 DOK7Q18PE1 504 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 TBC1D10BQ4KMP7 808 aaPredicted RBP14.09□□□□□ -0.15
PHF3-212ENST00000515594 PRR5LQ6MZQ0 368 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 TRMT1LQ7Z2T5 733 aaKnown RBP14.09□□□□□ -0.15
PHF3-212ENST00000515594 WHAMMQ8TF30 809 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 CEP63Q96MT8 703 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 ANO3Q9BYT9 981 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 SIX2Q9NPC8 291 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 TMOD4Q9NZQ9 345 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 GGA1Q9UJY5 639 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 GOLGA6L10A6NI86 522 aa14.09□□□□□ -0.15
PHF3-212ENST00000515594 FAM86B1E9PN63 330 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms