RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 ZNF862O60290 1169 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 SORBS3O60504 671 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 GADD45BO75293 160 aaPredicted RBP13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 SGPL1O95470 568 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 PGK1P00558 417 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 ATP4AP20648 1035 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 SP4Q02446 784 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 FAM160A1Q05DH4 1040 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 LRRC41Q15345 812 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 ECM1Q16610 540 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 UGCGQ16739 394 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 XKR3Q5GH77 459 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 GNASQ5JWF2 1037 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 SPECC1Q5M775 1068 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 ELOA2Q8IYF1 753 aaPredicted RBP13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 FMR1NBQ8N0W7 255 aaPredicted RBP13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 FSIP1Q8NA03 581 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 IQUBQ8NA54 791 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 ANKLE1Q8NAG6 615 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 BANK1Q8NDB2 785 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 KAT2BQ92831 832 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 TIGD1Q96MW7 591 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 KATNAL1Q9BW62 490 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 NIFKQ9BYG3 293 aaKnown RBP13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 SEZ6LQ9BYH1 1024 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 MAGEF1Q9HAY2 307 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 ANKEF1Q9NU02 776 aa13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 WRAP73Q9P2S5 460 aaPredicted RBP13.4□□□□□ -0.26
PDLIM5-220ENST00000514830 A0A087X0B3 334 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 A0A1B0GVL5 298 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 POTEB3A0JP26 581 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 MYADML2A6NDP7 307 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 H3BRB1 525 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 DNM1LO00429 736 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 OATP04181 439 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 PLCG1P19174 1290 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 GJA8P48165 433 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 NDUFA8P51970 172 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 BEX3Q00994 111 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 CYP4A11Q02928 519 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 SNW1Q13573 536 aaKnown RBP13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 CTTNQ14247 550 aaKnown RBP13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 KARSQ15046 597 aaKnown RBP13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 NAALADL2Q58DX5 795 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 RRAGBQ5VZM2 374 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 PDXDC2PQ6P474 469 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 POTEBQ6S5H4 581 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 TPH2Q8IWU9 490 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 ATP8B4Q8TF62 1192 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 BBXQ8WY36 941 aaPredicted RBP13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 GLG1Q92896 1179 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 CDK5RAP3Q96JB5 506 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 DEFB118Q96PH6 123 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 MTG1Q9BT17 334 aaPredicted RBP13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 GOLPH3LQ9H4A5 285 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 TUT1Q9H6E5 874 aaKnown RBP13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 BLOC1S4Q9NUP1 217 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 DDX19AQ9NUU7 478 aaKnown RBP13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 PHF24Q9UPV7 400 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 KIAA1024Q9UPX6 916 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 DNM3Q9UQ16 869 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 COL1A2P08123 1366 aa13.39□□□□□ -0.27
PDLIM5-220ENST00000514830 HBP1O60381 514 aa13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 EYA4O95677 639 aa13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 MBD3O95983 291 aa13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 SLFN14P0C7P3 912 aa13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 HOXC8P31273 242 aa13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 YWHABP31946 246 aaKnown RBP13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 SYKP43405 635 aa13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 PRKCEQ02156 737 aa13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 TARBP2Q15633 366 aaKnown RBP13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 KCNA10Q16322 511 aa13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 POTEGQ6S5H5 508 aa13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 ANO5Q75V66 913 aa13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 OTUD6AQ7L8S5 288 aa13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 RAD54LQ92698 747 aa13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 NRBP2Q9NSY0 501 aa13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 KBTBD4Q9NVX7 518 aa13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 KCND2Q9NZV8 630 aa13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 MYH11P35749 1972 aa13.38□□□□□ -0.27
PDLIM5-220ENST00000514830 POLR2DO15514 142 aaKnown RBP13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 ACTN4O43707 911 aaKnown RBP13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 ZNF202O95125 648 aa13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 ASGR1P07306 291 aa13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 ZNF286BP0CG31 522 aa13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 STAT6P42226 847 aa13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 PSEN2P49810 448 aa13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 ACLYP53396 1101 aa13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 IRX5P78411 483 aaPredicted RBP13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 PLCB4Q15147 1175 aa13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 UTP14CQ5TAP6 766 aaKnown RBP13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 CNNM4Q6P4Q7 775 aa13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 KCNK18Q7Z418 384 aa13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 SESTD1Q86VW0 696 aa13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 TRIM50Q86XT4 487 aa13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 EXOC8Q8IYI6 725 aa13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 SYT2Q8N9I0 419 aaPredicted RBP13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 LRRC15Q8TF66 581 aa13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 U2AF1L4Q8WU68 220 aaKnown RBP13.37□□□□□ -0.27
PDLIM5-220ENST00000514830 LARP4BQ92615 738 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms