RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 FAM13AO94988 1023 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 ZBTB7AO95365 584 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 ZNF280AP59817 542 aaPredicted RBP9.02□□□□□ -0.97
CPNE4-211ENST00000514439 KCNA1Q09470 495 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 DGKZQ13574 1117 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 TNFAIP1Q13829 316 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 TDRD12Q587J7 1177 aaKnown RBP9.02□□□□□ -0.97
CPNE4-211ENST00000514439 SFMBT2Q5VUG0 894 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 B3GNT9Q6UX72 402 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 FRMD5Q7Z6J6 570 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 PRPF38AQ8NAV1 312 aaKnown RBP9.02□□□□□ -0.97
CPNE4-211ENST00000514439 MSANTD4Q8NCY6 345 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 LPAR1Q92633 364 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 SYN2Q92777 582 aaPredicted RBP9.02□□□□□ -0.97
CPNE4-211ENST00000514439 MXRA8Q9BRK3 442 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 TEKT3Q9BXF9 490 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 ARMCX3Q9UH62 379 aaPredicted RBP9.02□□□□□ -0.97
CPNE4-211ENST00000514439 SAR1BQ9Y6B6 198 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 RBBP6Q7Z6E9 1792 aaKnown RBP9.02□□□□□ -0.97
CPNE4-211ENST00000514439 RPTORQ8N122 1335 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 ZMYM2Q9UBW7 1377 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 POTEB2H3BUK9 544 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 EIF3DO15371 548 aaKnown RBP eCLIP9.02□□□□□ -0.97
CPNE4-211ENST00000514439 SRGAP2O75044 1071 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 TBC1D8O95759 1140 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 NR3C1P04150 777 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 ITGB5P18084 799 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 MUTP22033 750 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 NMT1P30419 496 aaKnown RBP9.02□□□□□ -0.97
CPNE4-211ENST00000514439 TUBB4BP68371 445 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 GFPT1Q06210 699 aaPredicted RBP9.02□□□□□ -0.97
CPNE4-211ENST00000514439 TNIP1Q15025 636 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 EPHA7Q15375 998 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 SLC9C1Q4G0N8 1177 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 MYCT1Q8N699 235 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 NOA1Q8NC60 698 aaKnown RBP9.02□□□□□ -0.97
CPNE4-211ENST00000514439 IL31RAQ8NI17 732 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 UBE2Q2Q8WVN8 375 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 CLEC4DQ8WXI8 215 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 PNKPQ96T60 521 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 LXNQ9BS40 222 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 KIAA1683Q9H0B3 1180 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 GANQ9H2C0 597 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 MLXIPQ9HAP2 919 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 PARVGQ9HBI0 331 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 ARFGAP3Q9NP61 516 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 CAPN6Q9Y6Q1 641 aa9.02□□□□□ -0.97
CPNE4-211ENST00000514439 CCDC151A5D8V7 595 aa9.01□□□□□ -0.97
CPNE4-211ENST00000514439 CLIC2O15247 247 aa9.01□□□□□ -0.97
CPNE4-211ENST00000514439 AFPP02771 609 aaKnown RBP9.01□□□□□ -0.97
CPNE4-211ENST00000514439 SERPING1P05155 500 aa9.01□□□□□ -0.97
CPNE4-211ENST00000514439 RHOXF2BP0C7M4 288 aa9.01□□□□□ -0.97
CPNE4-211ENST00000514439 CASP4P49662 377 aa9.01□□□□□ -0.97
CPNE4-211ENST00000514439 RAPGEF1Q13905 1077 aa9.01□□□□□ -0.97
CPNE4-211ENST00000514439 BRD3Q15059 726 aa9.01□□□□□ -0.97
CPNE4-211ENST00000514439 CPXCR1Q8N123 301 aa9.01□□□□□ -0.97
CPNE4-211ENST00000514439 TRIM58Q8NG06 486 aa9.01□□□□□ -0.97
CPNE4-211ENST00000514439 NACC1Q96RE7 527 aa9.01□□□□□ -0.97
CPNE4-211ENST00000514439 RIT2Q99578 217 aa9.01□□□□□ -0.97
CPNE4-211ENST00000514439 RHOXF2Q9BQY4 288 aa9.01□□□□□ -0.97
CPNE4-211ENST00000514439 PKD2L1Q9P0L9 805 aa9.01□□□□□ -0.97
CPNE4-211ENST00000514439 ASTN2O75129 1339 aaPredicted RBP9.01□□□□□ -0.97
CPNE4-211ENST00000514439 RBAK-RBAKDNI3L0D1 243 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 DDX39AO00148 427 aaKnown RBP9□□□□□ -0.97
CPNE4-211ENST00000514439 SLC16A3O15427 465 aaKnown RBP9□□□□□ -0.97
CPNE4-211ENST00000514439 PJA2O43164 708 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 TGFB1I1O43294 461 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 ATP8B1O43520 1251 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 TACC1O75410 805 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 SASH3O75995 380 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 MOCS3O95396 460 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 EPB41P11171 864 aaKnown RBP9□□□□□ -0.97
CPNE4-211ENST00000514439 BCRP11274 1271 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 ACTN1P12814 892 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 XRCC5P13010 732 aaKnown RBP9□□□□□ -0.97
CPNE4-211ENST00000514439 ALAS1P13196 640 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 RPS12P25398 132 aaKnown RBP9□□□□□ -0.97
CPNE4-211ENST00000514439 RPL13P26373 211 aaKnown RBP9□□□□□ -0.97
CPNE4-211ENST00000514439 MAGEA1P43355 309 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 PLA2G4AP47712 749 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 ZNF131P52739 623 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 ZC2HC1CQ53FD0 456 aaPredicted RBP9□□□□□ -0.97
CPNE4-211ENST00000514439 DCAF17Q5H9S7 520 aaPredicted RBP9□□□□□ -0.97
CPNE4-211ENST00000514439 BANK1Q8NDB2 785 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 CAPZA3Q96KX2 299 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 FIZ1Q96SL8 496 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 MMS19Q96T76 1030 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 IKZF4Q9H2S9 585 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 SLC38A10Q9HBR0 1119 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 RAVER2Q9HCJ3 691 aaKnown RBP9□□□□□ -0.97
CPNE4-211ENST00000514439 KCNH7Q9NS40 1196 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 HOMER2Q9NSB8 354 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 RAB21Q9UL25 225 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 ATAD5Q96QE3 1844 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 CTNND1O60716 968 aaKnown RBP9□□□□□ -0.97
CPNE4-211ENST00000514439 FLOT1O75955 427 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 SLC9A1P19634 815 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 GHRHRQ02643 423 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 MUM1L1Q5H9M0 696 aa9□□□□□ -0.97
CPNE4-211ENST00000514439 TCERG1LQ5VWI1 586 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms