RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SFNP31947 248 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 TLE2Q04725 743 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 PPFIA1Q13136 1202 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 STK38Q15208 465 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 EPHA7Q15375 998 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 TMEM266Q2M3C6 531 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 SPECC1Q5M775 1068 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 PLA2G4FQ68DD2 849 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 POTEBQ6S5H4 581 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 DTHD1Q6ZMT9 781 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 C7orf31Q8N865 590 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 CLIC6Q96NY7 704 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 EIF2AK1Q9BQI3 630 aaKnown RBP11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 LXNQ9BS40 222 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 KATNAL1Q9BW62 490 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 SMARCAD1Q9H4L7 1026 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 PRDM5Q9NQX1 630 aaPredicted RBP11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 BMP2KQ9NSY1 1161 aaPredicted RBP11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 SETD4Q9NVD3 440 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 ERAP1Q9NZ08 941 aa11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 SEPT9Q9UHD8 586 aaPredicted RBP11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 TRIP12Q14669 1992 aaPredicted RBP11.01□□□□□ -0.65
TOPBP1-209ENST00000513818 ZBTB39O15060 712 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 OATP04181 439 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 CYP2C9P11712 490 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 NASPP49321 788 aaPredicted RBP11□□□□□ -0.65
TOPBP1-209ENST00000513818 SNX17Q15036 470 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 ZRSR1Q15695 479 aaKnown RBP11□□□□□ -0.65
TOPBP1-209ENST00000513818 GRIK4Q16099 956 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 POTEGQ6S5H5 508 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 SH3RF1Q7Z6J0 888 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 TPH2Q8IWU9 490 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 FAM126BQ8IXS8 530 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 SLC43A3Q8NBI5 491 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 RDM1Q8NG50 284 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 AFAP1L1Q8TED9 768 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 SNX29Q8TEQ0 813 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 LMBR1Q8WVP7 490 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 WNT8BQ93098 351 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 ZNF396Q96N95 335 aaPredicted RBP11□□□□□ -0.65
TOPBP1-209ENST00000513818 IPO9Q96P70 1041 aaKnown RBP11□□□□□ -0.65
TOPBP1-209ENST00000513818 PLIN2Q99541 437 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 GDPD2Q9HCC8 539 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 LRWD1Q9UFC0 647 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 GTF2IRD1Q9UHL9 959 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 FBXO2Q9UK22 296 aaPredicted RBP11□□□□□ -0.65
TOPBP1-209ENST00000513818 ZMYND8Q9ULU4 1186 aaPredicted RBP11□□□□□ -0.65
TOPBP1-209ENST00000513818 CEP131Q9UPN4 1083 aa11□□□□□ -0.65
TOPBP1-209ENST00000513818 MAFBQ9Y5Q3 323 aaPredicted RBP11□□□□□ -0.65
TOPBP1-209ENST00000513818 TCHHQ07283 1943 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 C17orf102A2RUQ5 167 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 LAD1O00515 517 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 TREHO43280 583 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 STBD1O95210 358 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 INSRRP14616 1297 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 SYN1P17600 705 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 CCT6AP40227 531 aaKnown RBP10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 PRPHP41219 470 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 QARSP47897 775 aaKnown RBP10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 CDK7P50613 346 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 NUCB2P80303 420 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 ECM1Q16610 540 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 MTERF2Q49AM1 385 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 USP49Q70CQ1 688 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 PLPPR4Q7Z2D5 763 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 IGSF22Q8N9C0 903 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 LINC00301Q8NCQ3 95 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 ATP8B4Q8TF62 1192 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 DPF3Q92784 378 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 ATP6V0A1Q93050 837 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 CTAGE1Q96RT6 745 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 PPP1R12CQ9BZL4 782 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 CSRNP2Q9H175 543 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 PDLIM7Q9NR12 457 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 LTBP2Q14767 1821 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 UMODL1Q5DID0 1318 aa10.99□□□□□ -0.65
TOPBP1-209ENST00000513818 TANC1Q9C0D5 1861 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 ZBTB42B2RXF5 422 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 SLITRK3O94933 977 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 BMP15O95972 392 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 P4HBP07237 508 aaKnown RBP10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 SPATA31C1P0DKV0 1188 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 PDIA4P13667 645 aaKnown RBP10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 CAPN2P17655 700 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 NPEPPSP55786 919 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 PSMC5P62195 406 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 FAAP100Q0VG06 881 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 SLC39A14Q15043 492 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 PTGISQ16647 500 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 NFRKBQ6P4R8 1299 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 RUFY4Q6ZNE9 571 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 SESTD1Q86VW0 696 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 CATSPER3Q86XQ3 398 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 ZNF579Q8NAF0 562 aaKnown RBP10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 PIGOQ8TEQ8 1089 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 DHX38Q92620 1227 aaKnown RBP10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 MMTAG2Q9BU76 263 aaKnown RBP10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 HTATIP2Q9BUP3 242 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 NOD1Q9Y239 953 aa10.98□□□□□ -0.65
TOPBP1-209ENST00000513818 SIP14410 1827 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms