RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 TCF7P36402 384 aaPredicted RBP12.95□□□□□ -0.34
RNF4-218ENST00000513284 TMEM62Q0P6H9 643 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 PPFIA1Q13136 1202 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 NMIQ13287 307 aaPredicted RBP12.95□□□□□ -0.34
RNF4-218ENST00000513284 KANK3Q6NY19 840 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 RSPH3Q86UC2 560 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 SENP7Q9BQF6 1050 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 FTHL17Q9BXU8 183 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 TSHZ2Q9NRE2 1034 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 TYW1Q9NV66 732 aaKnown RBP12.95□□□□□ -0.34
RNF4-218ENST00000513284 TMEM260Q9NX78 707 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 LIMD1Q9UGP4 676 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 TUBE1Q9UJT0 475 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 PCDHB12Q9Y5F1 795 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 EPG5Q9HCE0 2579 aa12.95□□□□□ -0.34
RNF4-218ENST00000513284 LOXHD1Q8IVV2 1947 aa12.94□□□□□ -0.34
RNF4-218ENST00000513284 FNDC1Q4ZHG4 1894 aaPredicted RBP12.94□□□□□ -0.34
RNF4-218ENST00000513284 PALM3A6NDB9 673 aaPredicted RBP12.94□□□□□ -0.34
RNF4-218ENST00000513284 CYTH3O43739 400 aa12.94□□□□□ -0.34
RNF4-218ENST00000513284 WEE2P0C1S8 567 aa12.94□□□□□ -0.34
RNF4-218ENST00000513284 HOXB8P17481 243 aaPredicted RBP12.94□□□□□ -0.34
RNF4-218ENST00000513284 MARK3P27448 753 aa12.94□□□□□ -0.34
RNF4-218ENST00000513284 TMEM266Q2M3C6 531 aa12.94□□□□□ -0.34
RNF4-218ENST00000513284 PLPP4Q5VZY2 271 aa12.94□□□□□ -0.34
RNF4-218ENST00000513284 MCTP2Q6DN12 878 aa12.94□□□□□ -0.34
RNF4-218ENST00000513284 PDE12Q6L8Q7 609 aaKnown RBP12.94□□□□□ -0.34
RNF4-218ENST00000513284 LRRC55Q6ZSA7 311 aa12.94□□□□□ -0.34
RNF4-218ENST00000513284 COLGALT1Q8NBJ5 622 aa12.94□□□□□ -0.34
RNF4-218ENST00000513284 PIGSQ96S52 555 aa12.94□□□□□ -0.34
RNF4-218ENST00000513284 PCYT2Q99447 389 aa12.94□□□□□ -0.34
RNF4-218ENST00000513284 FAM49AQ9H0Q0 323 aaPredicted RBP12.94□□□□□ -0.34
RNF4-218ENST00000513284 ADAM7Q9H2U9 754 aa12.94□□□□□ -0.34
RNF4-218ENST00000513284 CDHR5Q9HBB8 845 aa12.94□□□□□ -0.34
RNF4-218ENST00000513284 NR2E1Q9Y466 385 aa12.94□□□□□ -0.34
RNF4-218ENST00000513284 PCDHB15Q9Y5E8 787 aa12.94□□□□□ -0.34
RNF4-218ENST00000513284 IGSF9BQ9UPX0 1349 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 TRIM6-TRIM34B2RNG4 842 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 STAM2O75886 525 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 INSRRP14616 1297 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 SARSP49591 514 aaKnown RBP12.93□□□□□ -0.34
RNF4-218ENST00000513284 IGBP1P78318 339 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 PLCB3Q01970 1234 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 ANGPT1Q15389 498 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 GNPTABQ3T906 1256 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 CCDC178Q5BJE1 867 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 IER5Q5VY09 327 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 DGLUCYQ7Z3D6 616 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 IQCA1Q86XH1 822 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 CNTNAP3BQ96NU0 1288 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 CNTNAP3Q9BZ76 1288 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 CELF4Q9BZC1 486 aaKnown RBP12.93□□□□□ -0.34
RNF4-218ENST00000513284 RNF41Q9H4P4 317 aaPredicted RBP12.93□□□□□ -0.34
RNF4-218ENST00000513284 RIOX1Q9H6W3 641 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 AAASQ9NRG9 546 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 ZBTB47Q9UFB7 747 aaPredicted RBP12.93□□□□□ -0.34
RNF4-218ENST00000513284 TRPV2Q9Y5S1 764 aa12.93□□□□□ -0.34
RNF4-218ENST00000513284 TBKBP1A7MCY6 615 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 ZNF213O14771 459 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 KCNA2P16389 499 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 AOC1P19801 751 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 IBSPP21815 317 aaPredicted RBP12.92□□□□□ -0.34
RNF4-218ENST00000513284 FAM189BP81408 668 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 SEC23AQ15436 765 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 SPOUT1Q5T280 376 aaKnown RBP12.92□□□□□ -0.34
RNF4-218ENST00000513284 CCDC105Q8IYK2 499 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 KIAA2013Q8IYS2 634 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 ZDHHC14Q8IZN3 488 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 TRAPPC12Q8WVT3 735 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 SEPT1Q8WYJ6 367 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 MRPS27Q92552 414 aaKnown RBP12.92□□□□□ -0.34
RNF4-218ENST00000513284 TCF25Q9BQ70 676 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 ERVK-5Q9HDB9 667 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 ERAP1Q9NZ08 941 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 BAZ2BQ9UIF8 2168 aaKnown RBP12.92□□□□□ -0.34
RNF4-218ENST00000513284 LRFN2Q9ULH4 789 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 LZTS1Q9Y250 596 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 PCDHB7Q9Y5E2 793 aa12.92□□□□□ -0.34
RNF4-218ENST00000513284 FSD2A1L4K1 749 aa12.91□□□□□ -0.34
RNF4-218ENST00000513284 C9IYK1 514 aa12.91□□□□□ -0.34
RNF4-218ENST00000513284 PAK2Q13177 524 aa12.91□□□□□ -0.34
RNF4-218ENST00000513284 HOMER1Q86YM7 354 aa12.91□□□□□ -0.34
RNF4-218ENST00000513284 THNSL1Q8IYQ7 743 aa12.91□□□□□ -0.34
RNF4-218ENST00000513284 C12orf76Q8N812 135 aaPredicted RBP12.91□□□□□ -0.34
RNF4-218ENST00000513284 MRPL43Q8N983 215 aaKnown RBP12.91□□□□□ -0.34
RNF4-218ENST00000513284 DTWD2Q8NBA8 298 aa12.91□□□□□ -0.34
RNF4-218ENST00000513284 FLCNQ8NFG4 579 aa12.91□□□□□ -0.34
RNF4-218ENST00000513284 MFSD1Q9H3U5 465 aa12.91□□□□□ -0.34
RNF4-218ENST00000513284 RGS18Q9NS28 235 aa12.91□□□□□ -0.34
RNF4-218ENST00000513284 RNF19AQ9NV58 838 aa12.91□□□□□ -0.34
RNF4-218ENST00000513284 DLL3Q9NYJ7 618 aa12.91□□□□□ -0.34
RNF4-218ENST00000513284 NOC2LQ9Y3T9 749 aaKnown RBP12.91□□□□□ -0.34
RNF4-218ENST00000513284 PCDHA2Q9Y5H9 948 aa12.91□□□□□ -0.34
RNF4-218ENST00000513284 HCFC2Q9Y5Z7 792 aa12.91□□□□□ -0.34
RNF4-218ENST00000513284 CFAP47Q6ZTR5 3102 aa12.91□□□□□ -0.34
RNF4-218ENST00000513284 KDM3AQ9Y4C1 1321 aa12.9□□□□□ -0.34
RNF4-218ENST00000513284 RRN3P2A6NIE6 340 aa12.9□□□□□ -0.34
RNF4-218ENST00000513284 FGFR1P11362 822 aa12.9□□□□□ -0.34
RNF4-218ENST00000513284 ITGB5P18084 799 aa12.9□□□□□ -0.34
RNF4-218ENST00000513284 PDE1AP54750 535 aa12.9□□□□□ -0.34
RNF4-218ENST00000513284 NFX1Q12986 1120 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms