RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 KPNA6O60684 536 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 PPP1R11O60927 126 aaPredicted RBP6.85□□□□□ -1.31
GYPB-213ENST00000513128 NBNO60934 754 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 POU3F3P20264 500 aaPredicted RBP6.85□□□□□ -1.31
GYPB-213ENST00000513128 GDF10P55107 478 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 WDR5P61964 334 aaKnown RBP6.85□□□□□ -1.31
GYPB-213ENST00000513128 DEFB103AP81534 67 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 FGD1P98174 961 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 ZNF200P98182 395 aaPredicted RBP6.85□□□□□ -1.31
GYPB-213ENST00000513128 PTPN11Q06124 597 aaPredicted RBP6.85□□□□□ -1.31
GYPB-213ENST00000513128 GRB10Q13322 594 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 MBTPS1Q14703 1052 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 PTGISQ16647 500 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 SLC35G1Q2M3R5 365 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 QRICH1Q2TAL8 776 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 CWC27Q6UX04 472 aaKnown RBP6.85□□□□□ -1.31
GYPB-213ENST00000513128 DGKHQ86XP1 1220 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 SMC5Q8IY18 1101 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 STAG2Q8N3U4 1231 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 ENAHQ8N8S7 591 aaPredicted RBP6.85□□□□□ -1.31
GYPB-213ENST00000513128 ANKS1AQ92625 1134 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 ESR2Q92731 530 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 SLC9A7Q96T83 725 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 RMDN3Q96TC7 470 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 OSBPL7Q9BZF2 842 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 FTOQ9C0B1 505 aaKnown RBP eCLIP6.85□□□□□ -1.31
GYPB-213ENST00000513128 JMJD4Q9H9V9 463 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 VAT1LQ9HCJ6 419 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 ZSWIM5Q9P217 1185 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 DDX41Q9UJV9 622 aaKnown RBP6.85□□□□□ -1.31
GYPB-213ENST00000513128 ABCB11O95342 1321 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 RAD50Q92878 1312 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 ZNF213O14771 459 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 SNPHO15079 494 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 RGS20O76081 388 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 GH1P01241 217 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 ZNF286BP0CG31 522 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 PCP11498 1178 aaKnown RBP6.84□□□□□ -1.31
GYPB-213ENST00000513128 CKBP12277 381 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 ACTN1P12814 892 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 EIF2AK2P19525 551 aaKnown RBP6.84□□□□□ -1.31
GYPB-213ENST00000513128 RFC2P35250 354 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 BFSP2Q13515 415 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 GPATCH4Q5T3I0 446 aaKnown RBP6.84□□□□□ -1.31
GYPB-213ENST00000513128 ALKBH2Q6NS38 261 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 LRRC8DQ7L1W4 858 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 SESTD1Q86VW0 696 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 IL31RAQ8NI17 732 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 PHOSPHO2Q8TCD6 241 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 NSUN6Q8TEA1 469 aaKnown RBP6.84□□□□□ -1.31
GYPB-213ENST00000513128 ZSCAN10Q96SZ4 725 aaPredicted RBP6.84□□□□□ -1.31
GYPB-213ENST00000513128 ALG1Q9BT22 464 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 OSBPL3Q9H4L5 887 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 RNF41Q9H4P4 317 aaPredicted RBP6.84□□□□□ -1.31
GYPB-213ENST00000513128 BCAS3Q9H6U6 928 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 ZSWIM4Q9H7M6 989 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 PXMP2Q9NR77 195 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 HDAC6Q9UBN7 1215 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 GTF2IRD1Q9UHL9 959 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 TSR3Q9UJK0 312 aaKnown RBP6.84□□□□□ -1.31
GYPB-213ENST00000513128 MTUS1Q9ULD2 1270 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 POLIQ9UNA4 740 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 TELO2Q9Y4R8 837 aa6.84□□□□□ -1.31
GYPB-213ENST00000513128 ATG2AQ2TAZ0 1938 aa6.84□□□□□ -1.32
GYPB-213ENST00000513128 MICAL3Q7RTP6 2002 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 ERVH48-1M5A8F1 160 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 HAS3O00219 553 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 CFBP00751 764 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 CXCL10P02778 98 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 NR3C2P08235 984 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 PARP1P09874 1014 aaKnown RBP6.83□□□□□ -1.32
GYPB-213ENST00000513128 SELPP16109 830 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 CASTP20810 708 aaKnown RBP6.83□□□□□ -1.32
GYPB-213ENST00000513128 GNA15P30679 374 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 HOXA13P31271 388 aaPredicted RBP6.83□□□□□ -1.32
GYPB-213ENST00000513128 HSD17B4P51659 736 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 FOXK2Q01167 660 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 SP2Q02086 613 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 NUCB1Q02818 461 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 ARID5AQ03989 594 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 GNL2Q13823 731 aaKnown RBP6.83□□□□□ -1.32
GYPB-213ENST00000513128 SEC23AQ15436 765 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 STXBP2Q15833 593 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 KIAA0753Q2KHM9 967 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 TRIM71Q2Q1W2 868 aaKnown RBP6.83□□□□□ -1.32
GYPB-213ENST00000513128 ASPRV1Q53RT3 343 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 BRDTQ58F21 947 aaPredicted RBP6.83□□□□□ -1.32
GYPB-213ENST00000513128 ZNF618Q5T7W0 954 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 FAM117BQ6P1L5 589 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.83□□□□□ -1.32
GYPB-213ENST00000513128 CYB5R4Q7L1T6 521 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 JAZF1Q86VZ6 243 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 CHD1LQ86WJ1 897 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 FBXO11Q86XK2 927 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 TICAM2Q86XR7 235 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 MCF2L2Q86YR7 1114 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 AFAP1L1Q8TED9 768 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 GDPD5Q8WTR4 605 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 SPACA7Q96KW9 195 aa6.83□□□□□ -1.32
GYPB-213ENST00000513128 IWS1Q96ST2 819 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms