RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 CCL23P55773 120 aa19.54■□□□□ 0.72
DDR1-270ENST00000513043 PSMC5P62195 406 aa19.54■□□□□ 0.72
DDR1-270ENST00000513043 ATP2C1P98194 919 aaPredicted RBP19.54■□□□□ 0.72
DDR1-270ENST00000513043 CEBPZQ03701 1054 aaKnown RBP19.54■□□□□ 0.72
DDR1-270ENST00000513043 SF3A1Q15459 793 aaKnown RBP19.54■□□□□ 0.72
DDR1-270ENST00000513043 TMEM266Q2M3C6 531 aa19.54■□□□□ 0.72
DDR1-270ENST00000513043 TPH2Q8IWU9 490 aa19.54■□□□□ 0.72
DDR1-270ENST00000513043 BBXQ8WY36 941 aaPredicted RBP19.54■□□□□ 0.72
DDR1-270ENST00000513043 FAM167AQ96KS9 214 aa19.54■□□□□ 0.72
DDR1-270ENST00000513043 EIF2AK1Q9BQI3 630 aaKnown RBP19.54■□□□□ 0.72
DDR1-270ENST00000513043 LXNQ9BS40 222 aa19.54■□□□□ 0.72
DDR1-270ENST00000513043 WRAP73Q9P2S5 460 aaPredicted RBP19.54■□□□□ 0.72
DDR1-270ENST00000513043 TUBE1Q9UJT0 475 aa19.54■□□□□ 0.72
DDR1-270ENST00000513043 CLIC4Q9Y696 253 aa19.54■□□□□ 0.72
DDR1-270ENST00000513043 RRN3P2A6NIE6 340 aa19.53■□□□□ 0.72
DDR1-270ENST00000513043 DDX11L8A8MPP1 907 aa19.53■□□□□ 0.72
DDR1-270ENST00000513043 RBAK-RBAKDNI3L0D1 243 aa19.53■□□□□ 0.72
DDR1-270ENST00000513043 LAD1O00515 517 aa19.53■□□□□ 0.72
DDR1-270ENST00000513043 F13A1P00488 732 aa19.53■□□□□ 0.72
DDR1-270ENST00000513043 TIMP1P01033 207 aa19.53■□□□□ 0.72
DDR1-270ENST00000513043 P4HBP07237 508 aaKnown RBP19.53■□□□□ 0.72
DDR1-270ENST00000513043 QARSP47897 775 aaKnown RBP19.53■□□□□ 0.72
DDR1-270ENST00000513043 ADAM17P78536 824 aa19.53■□□□□ 0.72
DDR1-270ENST00000513043 PTK7Q13308 1070 aa19.53■□□□□ 0.72
DDR1-270ENST00000513043 IL17AQ16552 155 aa19.53■□□□□ 0.72
DDR1-270ENST00000513043 MARCH8Q5T0T0 291 aa19.53■□□□□ 0.72
DDR1-270ENST00000513043 RUFY4Q6ZNE9 571 aa19.53■□□□□ 0.72
DDR1-270ENST00000513043 SERINC5Q86VE9 423 aa19.53■□□□□ 0.72
DDR1-270ENST00000513043 TNPO1Q92973 898 aaKnown RBP19.53■□□□□ 0.72
DDR1-270ENST00000513043 SH2D3AQ9BRG2 576 aa19.53■□□□□ 0.72
DDR1-270ENST00000513043 NRBP2Q9NSY0 501 aa19.53■□□□□ 0.72
DDR1-270ENST00000513043 SEPT9Q9UHD8 586 aaPredicted RBP19.53■□□□□ 0.72
DDR1-270ENST00000513043 TRIP12Q14669 1992 aaPredicted RBP19.53■□□□□ 0.72
DDR1-270ENST00000513043 MYH9P35579 1960 aaKnown RBP19.52■□□□□ 0.72
DDR1-270ENST00000513043 ZBTB42B2RXF5 422 aa19.52■□□□□ 0.72
DDR1-270ENST00000513043 FXR2P51116 673 aaKnown RBP eCLIP19.52■□□□□ 0.72
DDR1-270ENST00000513043 DTHD1Q6ZMT9 781 aa19.52■□□□□ 0.72
DDR1-270ENST00000513043 SCLYQ96I15 445 aa19.52■□□□□ 0.72
DDR1-270ENST00000513043 FAM49AQ9H0Q0 323 aaPredicted RBP19.52■□□□□ 0.72
DDR1-270ENST00000513043 DAXXQ9UER7 740 aaPredicted RBP19.52■□□□□ 0.72
DDR1-270ENST00000513043 WDR81Q562E7 1941 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 VWA3AA6NCI4 1184 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 PP2D1A8MPX8 630 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 SLITRK3O94933 977 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 STBD1O95210 358 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 PDIA4P13667 645 aaKnown RBP19.51■□□□□ 0.71
DDR1-270ENST00000513043 ANP32AP39687 249 aaKnown RBP19.51■□□□□ 0.71
DDR1-270ENST00000513043 THPOP40225 353 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 PRPHP41219 470 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 BFSP2Q13515 415 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 MTERF2Q49AM1 385 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 XKR3Q5GH77 459 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 ZNF484Q5JVG2 852 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 HABP4Q5JVS0 413 aaKnown RBP19.51■□□□□ 0.71
DDR1-270ENST00000513043 PLA2G4FQ68DD2 849 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 CCDC155Q8N6L0 562 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 RETREG2Q8NC44 543 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 USP28Q96RU2 1077 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 HSD17B14Q9BPX1 270 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 WNT8AQ9H1J5 351 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 LRWD1Q9UFC0 647 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 LTBP2Q14767 1821 aa19.51■□□□□ 0.71
DDR1-270ENST00000513043 RANBP2P49792 3224 aaKnown RBP19.5■□□□□ 0.71
DDR1-270ENST00000513043 COL1A2P08123 1366 aa19.5■□□□□ 0.71
DDR1-270ENST00000513043 A0A087WWV3 80 aa19.5■□□□□ 0.71
DDR1-270ENST00000513043 MBLAC1A4D2B0 266 aaPredicted RBP19.5■□□□□ 0.71
DDR1-270ENST00000513043 ZBTB39O15060 712 aa19.5■□□□□ 0.71
DDR1-270ENST00000513043 MED24O75448 989 aa19.5■□□□□ 0.71
DDR1-270ENST00000513043 CTSHP09668 335 aa19.5■□□□□ 0.71
DDR1-270ENST00000513043 CKBP12277 381 aa19.5■□□□□ 0.71
DDR1-270ENST00000513043 KLRC1P26715 233 aa19.5■□□□□ 0.71
DDR1-270ENST00000513043 CDC25AP30304 524 aa19.5■□□□□ 0.71
DDR1-270ENST00000513043 TRIM71Q2Q1W2 868 aaKnown RBP19.5■□□□□ 0.71
DDR1-270ENST00000513043 MFSD5Q6N075 450 aa19.5■□□□□ 0.71
DDR1-270ENST00000513043 MTHFD1LQ6UB35 978 aa19.5■□□□□ 0.71
DDR1-270ENST00000513043 ERMNQ8TAM6 284 aa19.5■□□□□ 0.71
DDR1-270ENST00000513043 CAGE1Q8TC20 777 aa19.5■□□□□ 0.71
DDR1-270ENST00000513043 ZSWIM4Q9H7M6 989 aa19.5■□□□□ 0.71
DDR1-270ENST00000513043 TFIP11Q9UBB9 837 aaKnown RBP19.5■□□□□ 0.71
DDR1-270ENST00000513043 CEP131Q9UPN4 1083 aa19.5■□□□□ 0.71
DDR1-270ENST00000513043 ZDHHC9Q9Y397 364 aa19.5■□□□□ 0.71
DDR1-270ENST00000513043 KAT6AQ92794 2004 aa19.5■□□□□ 0.71
DDR1-270ENST00000513043 DKC1O60832 514 aaKnown RBP eCLIP19.49■□□□□ 0.71
DDR1-270ENST00000513043 BMP15O95972 392 aa19.49■□□□□ 0.71
DDR1-270ENST00000513043 SPATA31C1P0DKV0 1188 aa19.49■□□□□ 0.71
DDR1-270ENST00000513043 CSF2RAP15509 400 aa19.49■□□□□ 0.71
DDR1-270ENST00000513043 MARCKSP29966 332 aaPredicted RBP19.49■□□□□ 0.71
DDR1-270ENST00000513043 CCT6AP40227 531 aaKnown RBP19.49■□□□□ 0.71
DDR1-270ENST00000513043 NPEPPSP55786 919 aa19.49■□□□□ 0.71
DDR1-270ENST00000513043 PTPAQ15257 358 aa19.49■□□□□ 0.71
DDR1-270ENST00000513043 ZNF618Q5T7W0 954 aa19.49■□□□□ 0.71
DDR1-270ENST00000513043 CHRDL2Q6WN34 429 aa19.49■□□□□ 0.71
DDR1-270ENST00000513043 ANO5Q75V66 913 aa19.49■□□□□ 0.71
DDR1-270ENST00000513043 CATSPER3Q86XQ3 398 aa19.49■□□□□ 0.71
DDR1-270ENST00000513043 C4orf19Q8IY42 314 aa19.49■□□□□ 0.71
DDR1-270ENST00000513043 IGSF22Q8N9C0 903 aa19.49■□□□□ 0.71
DDR1-270ENST00000513043 NEK9Q8TD19 979 aa19.49■□□□□ 0.71
DDR1-270ENST00000513043 DNAJB3Q8WWF6 145 aa19.49■□□□□ 0.71
DDR1-270ENST00000513043 RAB34Q9BZG1 259 aa19.49■□□□□ 0.71
DDR1-270ENST00000513043 COLQQ9Y215 455 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms