RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	RIPOR2	Q9Y4F9	1068 aa		4.55	□□□□□ -1.68
CAST-238	ENST00000512620	SPO11	Q9Y5K1	396 aa		4.55	□□□□□ -1.68
CAST-238	ENST00000512620	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.54	□□□□□ -1.68
CAST-238	ENST00000512620	DBX1	A6NMT0	343 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	CCER2	I3L3R5	266 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	EIF5B	O60841	1220 aa	Known RBP	4.54	□□□□□ -1.68
CAST-238	ENST00000512620	CLASP2	O75122	1294 aa	Known RBP	4.54	□□□□□ -1.68
CAST-238	ENST00000512620	H2AFY	O75367	372 aa	Known RBP	4.54	□□□□□ -1.68
CAST-238	ENST00000512620	PEX14	O75381	377 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	ULK1	O75385	1050 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	C4BPA	P04003	597 aa	Known RBP	4.54	□□□□□ -1.68
CAST-238	ENST00000512620	MME	P08473	750 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	ATF3	P18847	181 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	STAT5A	P42229	794 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	ERVK-21	P61565	698 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	SMAD3	P84022	425 aa	Known RBP	4.54	□□□□□ -1.68
CAST-238	ENST00000512620	PRR5	P85299	388 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	PDCD1	Q15116	288 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	TERF2	Q15554	542 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	SMAD2	Q15796	467 aa	Known RBP	4.54	□□□□□ -1.68
CAST-238	ENST00000512620	EMC4	Q5J8M3	183 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	CATSPERE	Q5SY80	951 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	LCE4A	Q5TA78	99 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	ERICH6B	Q5W0A0	696 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	NLGN4X	Q8N0W4	816 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	LILRA2	Q8N149	483 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	MYO1H	Q8N1T3	1032 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	CBARP	Q8N350	705 aa	Predicted RBP	4.54	□□□□□ -1.68
CAST-238	ENST00000512620	NETO2	Q8NC67	525 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	SEC14L1	Q92503	715 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	DLG3	Q92796	817 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	KIRREL1	Q96J84	757 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	CAMKK2	Q96RR4	588 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	SYT3	Q9BQG1	590 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	SEMA4A	Q9H3S1	761 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	ZMAT4	Q9H898	229 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	KCNH7	Q9NS40	1196 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	NOC2L	Q9Y3T9	749 aa	Known RBP	4.54	□□□□□ -1.68
CAST-238	ENST00000512620	B3GALT1	Q9Y5Z6	326 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	WDR97	A6NE52	1622 aa		4.54	□□□□□ -1.68
CAST-238	ENST00000512620	MAPKBP1	O60336	1514 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	ERICH3	Q5RHP9	1530 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	GOLGA6C	A6NDK9	693 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	GOLGA6B	A6NDN3	693 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	GOLGA8A	A7E2F4	631 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	GOLGA8B	A8MQT2	603 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	AKAP10	O43572	662 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	KDM1A	O60341	852 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	MAFK	O60675	156 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	FBXO21	O94952	628 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	APOL3	O95236	402 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	CYBB	P04839	570 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	KRT18	P05783	430 aa	Known RBP	4.53	□□□□□ -1.68
CAST-238	ENST00000512620	CLEC2L	P0C7M8	214 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	GOLGA6D	P0CG33	693 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	GNAL	P38405	381 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	SLC6A11	P48066	632 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	SESN3	P58005	492 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
CAST-238	ENST00000512620	CHRNA2	Q15822	529 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	PLEKHN1	Q494U1	663 aa	Predicted RBP	4.53	□□□□□ -1.68
CAST-238	ENST00000512620	PAN2	Q504Q3	1202 aa	Known RBP	4.53	□□□□□ -1.68
CAST-238	ENST00000512620	PGM2L1	Q6PCE3	622 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	PAQR3	Q6TCH7	311 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	INTS4	Q96HW7	963 aa	Known RBP	4.53	□□□□□ -1.68
CAST-238	ENST00000512620	MENT	Q9BUN1	341 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	KRTAP4-11	Q9BYQ6	195 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	CDH19	Q9H159	772 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	KCNK12	Q9HB15	430 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	GOLGA6A	Q9NYA3	693 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	MSRA	Q9UJ68	235 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	NUDT5	Q9UKK9	219 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	NOB1	Q9ULX3	412 aa	Known RBP	4.53	□□□□□ -1.68
CAST-238	ENST00000512620	EDAR	Q9UNE0	448 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	ZNF652	Q9Y2D9	606 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	YBX2	Q9Y2T7	364 aa	Known RBP	4.53	□□□□□ -1.68
CAST-238	ENST00000512620	ARAP1	Q96P48	1450 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	RAPGEF2	Q9Y4G8	1499 aa		4.53	□□□□□ -1.68
CAST-238	ENST00000512620	BIN1	O00499	593 aa		4.52	□□□□□ -1.69
CAST-238	ENST00000512620	FOXP2	O15409	715 aa		4.52	□□□□□ -1.69
CAST-238	ENST00000512620	SRGAP3	O43295	1099 aa		4.52	□□□□□ -1.69
CAST-238	ENST00000512620	EIF3J	O75822	258 aa	Known RBP	4.52	□□□□□ -1.69
CAST-238	ENST00000512620	PAPLN	O95428	1278 aa		4.52	□□□□□ -1.69
CAST-238	ENST00000512620	MPO	P05164	745 aa		4.52	□□□□□ -1.69
CAST-238	ENST00000512620	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.52	□□□□□ -1.69
CAST-238	ENST00000512620	MC4R	P32245	332 aa		4.52	□□□□□ -1.69
CAST-238	ENST00000512620	LSP1	P33241	339 aa		4.52	□□□□□ -1.69
CAST-238	ENST00000512620	EPHA5	P54756	1037 aa		4.52	□□□□□ -1.69
CAST-238	ENST00000512620	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.52	□□□□□ -1.69
CAST-238	ENST00000512620	HDAC1	Q13547	482 aa	Predicted RBP	4.52	□□□□□ -1.69
CAST-238	ENST00000512620	CLUL1	Q15846	466 aa		4.52	□□□□□ -1.69
CAST-238	ENST00000512620	KRTAP19-4	Q3LI73	84 aa		4.52	□□□□□ -1.69
CAST-238	ENST00000512620	PHF19	Q5T6S3	580 aa		4.52	□□□□□ -1.69
CAST-238	ENST00000512620	EXOC8	Q8IYI6	725 aa		4.52	□□□□□ -1.69
CAST-238	ENST00000512620	FAM26E	Q8N5C1	309 aa		4.52	□□□□□ -1.69
CAST-238	ENST00000512620	HIPK4	Q8NE63	616 aa		4.52	□□□□□ -1.69
CAST-238	ENST00000512620	PEX11G	Q96HA9	241 aa		4.52	□□□□□ -1.69
CAST-238	ENST00000512620	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.52	□□□□□ -1.69
CAST-238	ENST00000512620	ZNF496	Q96IT1	587 aa	Predicted RBP	4.52	□□□□□ -1.69
CAST-238	ENST00000512620	SCYL1	Q96KG9	808 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms