RNA–Protein interactions for RNA: ENST00000512482.1

COL6A5-204, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 5

Gene COL6A5, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-204ENST00000512482 USP33Q8TEY7 942 aa4.52□□□□□ -1.69
COL6A5-204ENST00000512482 ZNF496Q96IT1 587 aaPredicted RBP4.52□□□□□ -1.69
COL6A5-204ENST00000512482 NELL2Q99435 816 aa4.52□□□□□ -1.69
COL6A5-204ENST00000512482 PDGFDQ9GZP0 370 aaPredicted RBP4.52□□□□□ -1.69
COL6A5-204ENST00000512482 CCDC113Q9H0I3 377 aa4.52□□□□□ -1.69
COL6A5-204ENST00000512482 ZCCHC4Q9H5U6 513 aa4.52□□□□□ -1.69
COL6A5-204ENST00000512482 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.52□□□□□ -1.69
COL6A5-204ENST00000512482 GULP1Q9UBP9 304 aa4.52□□□□□ -1.69
COL6A5-204ENST00000512482 CNOT6Q9ULM6 557 aaKnown RBP4.52□□□□□ -1.69
COL6A5-204ENST00000512482 ZNF652Q9Y2D9 606 aa4.52□□□□□ -1.69
COL6A5-204ENST00000512482 RWDD3Q9Y3V2 267 aa4.52□□□□□ -1.69
COL6A5-204ENST00000512482 A6NCN8 305 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 CCDC85CA6NKD9 419 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 PDPK1O15530 556 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 MEFVO15553 781 aaPredicted RBP4.51□□□□□ -1.69
COL6A5-204ENST00000512482 PRPF3O43395 683 aaKnown RBP4.51□□□□□ -1.69
COL6A5-204ENST00000512482 PPP1R11O60927 126 aaPredicted RBP4.51□□□□□ -1.69
COL6A5-204ENST00000512482 BAIAP3O94812 1187 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 RASGRP1O95267 797 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 CAPNS1P04632 268 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 NCAM1P13591 858 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 PIK3CAP42336 1068 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 MAPKAPK2P49137 400 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 GFRA1P56159 465 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 PUM3Q15397 648 aaKnown RBP4.51□□□□□ -1.69
COL6A5-204ENST00000512482 SF1Q15637 639 aaKnown RBP4.51□□□□□ -1.69
COL6A5-204ENST00000512482 TCERG1LQ5VWI1 586 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 TSHZ3Q63HK5 1081 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 ZC3H14Q6PJT7 736 aaKnown RBP4.51□□□□□ -1.69
COL6A5-204ENST00000512482 LVRNQ6Q4G3 990 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 RPTNQ6XPR3 784 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 RASSF3Q86WH2 238 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 TMEM151BQ8IW70 566 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 IFNL2Q8IZJ0 200 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 KREMEN2Q8NCW0 462 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 ATXN2LQ8WWM7 1075 aaKnown RBP4.51□□□□□ -1.69
COL6A5-204ENST00000512482 KCTD13Q8WZ19 329 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 DIO2Q92813 273 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 ZNF669Q96BR6 464 aaPredicted RBP4.51□□□□□ -1.69
COL6A5-204ENST00000512482 KCNC2Q96PR1 638 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 SGPP1Q9BX95 441 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 GCM1Q9NP62 436 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 PGAP2Q9UHJ9 254 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 MBD1Q9UIS9 605 aaPredicted RBP4.51□□□□□ -1.69
COL6A5-204ENST00000512482 DBR1Q9UK59 544 aaKnown RBP4.51□□□□□ -1.69
COL6A5-204ENST00000512482 SMC3Q9UQE7 1217 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 MSRB2Q9Y3D2 182 aa4.51□□□□□ -1.69
COL6A5-204ENST00000512482 F8W031 263 aaPredicted RBP4.5□□□□□ -1.69
COL6A5-204ENST00000512482 RFXAPO00287 272 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 RHOBTB3O94955 611 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 FUCA1P04066 466 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 BMP7P18075 431 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 OAS2P29728 719 aaKnown RBP4.5□□□□□ -1.69
COL6A5-204ENST00000512482 CNGA1P29973 690 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 NEK3P51956 506 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 GTF2A2P52657 109 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 EIF5P55010 431 aaKnown RBP4.5□□□□□ -1.69
COL6A5-204ENST00000512482 MAP2K1Q02750 393 aaPredicted RBP4.5□□□□□ -1.69
COL6A5-204ENST00000512482 NUCB1Q02818 461 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 INF2Q27J81 1249 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 DNAJC21Q5F1R6 531 aaKnown RBP4.5□□□□□ -1.69
COL6A5-204ENST00000512482 LMBRD2Q68DH5 695 aaPredicted RBP4.5□□□□□ -1.69
COL6A5-204ENST00000512482 MMS22LQ6ZRQ5 1243 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 TMC6Q7Z403 805 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 MORC1Q86VD1 984 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 DGKHQ86XP1 1220 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 LRRC47Q8N1G4 583 aaKnown RBP4.5□□□□□ -1.69
COL6A5-204ENST00000512482 ENAHQ8N8S7 591 aaPredicted RBP4.5□□□□□ -1.69
COL6A5-204ENST00000512482 JPH3Q8WXH2 748 aaPredicted RBP4.5□□□□□ -1.69
COL6A5-204ENST00000512482 HERPUD2Q9BSE4 406 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 ASPSCR1Q9BZE9 553 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 CNTD2Q9H8S5 307 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 KCTD3Q9Y597 815 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 TIMM13Q9Y5L4 95 aaPredicted RBP4.5□□□□□ -1.69
COL6A5-204ENST00000512482 ZC3H12DA2A288 527 aaKnown RBP4.5□□□□□ -1.69
COL6A5-204ENST00000512482 GOLGA6L6A8MZA4 724 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 CHL1O00533 1208 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 N4BP3O15049 544 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 SNX2O60749 519 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 HNRNPCP07910 306 aaKnown RBP eCLIP4.5□□□□□ -1.69
COL6A5-204ENST00000512482 GLI4P10075 376 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 TNFAIP3P21580 790 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 PSMA3P25788 255 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 SERPINB3P29508 390 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 GRIA2P42262 883 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 ZNF131P52739 623 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 MAP4K2Q12851 820 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 KCNAB2Q13303 367 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 RASGRF1Q13972 1273 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 PRSS53Q2L4Q9 553 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 DACT2Q5SW24 774 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 CATIPQ7Z7H3 387 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 LCA5Q86VQ0 697 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 LDHDQ86WU2 507 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 THNSL2Q86YJ6 484 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 TCEAL8Q8IYN2 117 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 NKAIN3Q8N8D7 197 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 MARCH10Q8NA82 808 aaPredicted RBP4.5□□□□□ -1.69
COL6A5-204ENST00000512482 TMEM145Q8NBT3 493 aa4.5□□□□□ -1.69
COL6A5-204ENST00000512482 NETO2Q8NC67 525 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms