RNA–Protein interactions for RNA: ENST00000512482.1

COL6A5-204, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 5

Gene COL6A5, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-204ENST00000512482 AEBP2Q6ZN18 517 aaPredicted RBP18.5■□□□□ 0.55
COL6A5-204ENST00000512482 CHIC1Q5VXU3 224 aa17.59■□□□□ 0.41
COL6A5-204ENST00000512482 SENP3Q9H4L4 574 aaPredicted RBP15.85■□□□□ 0.13
COL6A5-204ENST00000512482 PHF23Q9BUL5 403 aaPredicted RBP15.62■□□□□ 0.09
COL6A5-204ENST00000512482 FOXD1Q16676 465 aa14.73□□□□□ -0.05
COL6A5-204ENST00000512482 PLPPR3Q6T4P5 718 aa14.06□□□□□ -0.16
COL6A5-204ENST00000512482 POTEDQ86YR6 584 aa14.04□□□□□ -0.16
COL6A5-204ENST00000512482 MSH5O43196 834 aa13.84□□□□□ -0.19
COL6A5-204ENST00000512482 PIAS4Q8N2W9 510 aaPredicted RBP13.76□□□□□ -0.21
COL6A5-204ENST00000512482 PPP6R1Q9UPN7 881 aa13.74□□□□□ -0.21
COL6A5-204ENST00000512482 ADRA2BP18089 450 aa13.69□□□□□ -0.22
COL6A5-204ENST00000512482 SCAF1Q9H7N4 1312 aaKnown RBP12.61□□□□□ -0.39
COL6A5-204ENST00000512482 MAPK8IP2Q13387 824 aaPredicted RBP12.58□□□□□ -0.4
COL6A5-204ENST00000512482 DMRT2Q9Y5R5 561 aa12.56□□□□□ -0.4
COL6A5-204ENST00000512482 PPP4R3CPQ6ZMV5 832 aa12.31□□□□□ -0.44
COL6A5-204ENST00000512482 CNKSR2Q8WXI2 1034 aa12.1□□□□□ -0.47
COL6A5-204ENST00000512482 HOXD11P31277 338 aaPredicted RBP12.1□□□□□ -0.47
COL6A5-204ENST00000512482 DCAF8L1A6NGE4 600 aa12□□□□□ -0.49
COL6A5-204ENST00000512482 RNF216Q9NWF9 866 aaPredicted RBP12□□□□□ -0.49
COL6A5-204ENST00000512482 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
COL6A5-204ENST00000512482 NCBP3Q53F19 620 aaKnown RBP11.86□□□□□ -0.51
COL6A5-204ENST00000512482 RNF39Q9H2S5 420 aa11.78□□□□□ -0.52
COL6A5-204ENST00000512482 DNAJC5BQ9UF47 199 aa11.74□□□□□ -0.53
COL6A5-204ENST00000512482 NPM3O75607 178 aaKnown RBP11.64□□□□□ -0.55
COL6A5-204ENST00000512482 C1QBPQ07021 282 aaKnown RBP11.64□□□□□ -0.55
COL6A5-204ENST00000512482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.5□□□□□ -0.57
COL6A5-204ENST00000512482 KCNA4P22459 653 aa11.37□□□□□ -0.59
COL6A5-204ENST00000512482 U3KPZ7 1027 aaPredicted RBP11.25□□□□□ -0.61
COL6A5-204ENST00000512482 SLC4A2P04920 1241 aa11.12□□□□□ -0.63
COL6A5-204ENST00000512482 CAPN15O75808 1086 aa11.07□□□□□ -0.64
COL6A5-204ENST00000512482 SPINK5Q9NQ38 1064 aaPredicted RBP11.07□□□□□ -0.64
COL6A5-204ENST00000512482 DSG3P32926 999 aa11.03□□□□□ -0.64
COL6A5-204ENST00000512482 APLP2Q06481 763 aa11□□□□□ -0.65
COL6A5-204ENST00000512482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.97□□□□□ -0.65
COL6A5-204ENST00000512482 HNRNPUL2Q1KMD3 747 aaKnown RBP10.97□□□□□ -0.65
COL6A5-204ENST00000512482 ZNF219Q9P2Y4 722 aaPredicted RBP10.9□□□□□ -0.67
COL6A5-204ENST00000512482 SAMD1Q6SPF0 538 aaPredicted RBP10.89□□□□□ -0.67
COL6A5-204ENST00000512482 TRHP20396 242 aaPredicted RBP10.88□□□□□ -0.67
COL6A5-204ENST00000512482 MYCNP04198 464 aaPredicted RBP10.8□□□□□ -0.68
COL6A5-204ENST00000512482 ABCB7O75027 752 aa10.79□□□□□ -0.68
COL6A5-204ENST00000512482 SLC4A1APQ9BWU0 796 aaKnown RBP10.75□□□□□ -0.69
COL6A5-204ENST00000512482 FOXD4L1Q9NU39 408 aa10.66□□□□□ -0.7
COL6A5-204ENST00000512482 POTEHQ6S545 545 aa10.64□□□□□ -0.71
COL6A5-204ENST00000512482 POLA2Q14181 598 aa10.6□□□□□ -0.71
COL6A5-204ENST00000512482 RBM42Q9BTD8 480 aaKnown RBP10.57□□□□□ -0.72
COL6A5-204ENST00000512482 ATF5Q9Y2D1 282 aaPredicted RBP10.49□□□□□ -0.73
COL6A5-204ENST00000512482 ZBTB22O15209 634 aa10.43□□□□□ -0.74
COL6A5-204ENST00000512482 ZBTB12Q9Y330 459 aaPredicted RBP10.42□□□□□ -0.74
COL6A5-204ENST00000512482 ATXN8OSP0DMR3 200 aa10.38□□□□□ -0.75
COL6A5-204ENST00000512482 AKT1S1Q96B36 256 aa10.31□□□□□ -0.76
COL6A5-204ENST00000512482 CHRDL2Q6WN34 429 aa10.29□□□□□ -0.76
COL6A5-204ENST00000512482 EHMT2Q96KQ7 1210 aa10.29□□□□□ -0.76
COL6A5-204ENST00000512482 OSCARQ8IYS5 282 aa10.23□□□□□ -0.77
COL6A5-204ENST00000512482 CSRNP3Q8WYN3 585 aa10.21□□□□□ -0.77
COL6A5-204ENST00000512482 REM2Q8IYK8 340 aaPredicted RBP10.18□□□□□ -0.78
COL6A5-204ENST00000512482 FBLN2P98095 1184 aa10.15□□□□□ -0.78
COL6A5-204ENST00000512482 SPDYE2BA6NHP3 402 aa10.09□□□□□ -0.79
COL6A5-204ENST00000512482 SPDYE6P0CI01 402 aa10.09□□□□□ -0.79
COL6A5-204ENST00000512482 SPDYE2Q495Y8 402 aa10.09□□□□□ -0.79
COL6A5-204ENST00000512482 PITPNM1O00562 1244 aa10.06□□□□□ -0.8
COL6A5-204ENST00000512482 PIP4P2Q8N4L2 257 aa10.03□□□□□ -0.8
COL6A5-204ENST00000512482 MKRN4PQ13434 485 aaPredicted RBP10.02□□□□□ -0.81
COL6A5-204ENST00000512482 FXR2P51116 673 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL6A5-204ENST00000512482 ZNF692Q9BU19 519 aaPredicted RBP9.94□□□□□ -0.82
COL6A5-204ENST00000512482 SSUH2Q9Y2M2 353 aa9.93□□□□□ -0.82
COL6A5-204ENST00000512482 SPDYE1Q8NFV5 336 aaPredicted RBP9.92□□□□□ -0.82
COL6A5-204ENST00000512482 SP7Q8TDD2 431 aaPredicted RBP9.92□□□□□ -0.82
COL6A5-204ENST00000512482 HAX1O00165 279 aa9.87□□□□□ -0.83
COL6A5-204ENST00000512482 CLEC11AQ9Y240 323 aa9.86□□□□□ -0.83
COL6A5-204ENST00000512482 PRKAR2AP13861 404 aaKnown RBP9.8□□□□□ -0.84
COL6A5-204ENST00000512482 PABPN1Q86U42 306 aaKnown RBP eCLIP9.78□□□□□ -0.84
COL6A5-204ENST00000512482 PRR29P0C7W0 189 aa9.72□□□□□ -0.85
COL6A5-204ENST00000512482 EVX2Q03828 476 aa9.72□□□□□ -0.85
COL6A5-204ENST00000512482 C19orf67A6NJJ6 358 aa9.68□□□□□ -0.86
COL6A5-204ENST00000512482 CHADLQ6NUI6 762 aa9.66□□□□□ -0.86
COL6A5-204ENST00000512482 PLSCR2Q9NRY7 297 aa9.66□□□□□ -0.86
COL6A5-204ENST00000512482 STAG3Q9UJ98 1225 aa9.57□□□□□ -0.88
COL6A5-204ENST00000512482 SPDYE4A6NLX3 237 aa9.55□□□□□ -0.88
COL6A5-204ENST00000512482 FARP1Q9Y4F1 1045 aaPredicted RBP9.55□□□□□ -0.88
COL6A5-204ENST00000512482 GABBR2O75899 941 aa9.53□□□□□ -0.88
COL6A5-204ENST00000512482 CD44P16070 742 aaKnown RBP9.49□□□□□ -0.89
COL6A5-204ENST00000512482 CLCN6P51797 869 aa9.46□□□□□ -0.9
COL6A5-204ENST00000512482 CREBZFQ9NS37 354 aa9.46□□□□□ -0.9
COL6A5-204ENST00000512482 ZNF579Q8NAF0 562 aaKnown RBP9.37□□□□□ -0.91
COL6A5-204ENST00000512482 ZRANB1Q9UGI0 708 aa9.36□□□□□ -0.91
COL6A5-204ENST00000512482 PROM2Q8N271 834 aa9.34□□□□□ -0.91
COL6A5-204ENST00000512482 NPM1P06748 294 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL6A5-204ENST00000512482 POTEIP0CG38 1075 aa9.31□□□□□ -0.92
COL6A5-204ENST00000512482 LHX8Q68G74 356 aa9.31□□□□□ -0.92
COL6A5-204ENST00000512482 PAK3O75914 559 aaPredicted RBP9.3□□□□□ -0.92
COL6A5-204ENST00000512482 MNX1P50219 401 aaPredicted RBP9.29□□□□□ -0.92
COL6A5-204ENST00000512482 DCBLD2Q96PD2 775 aa9.27□□□□□ -0.92
COL6A5-204ENST00000512482 FKBP8Q14318 412 aa9.24□□□□□ -0.93
COL6A5-204ENST00000512482 GALR2O43603 387 aaPredicted RBP9.22□□□□□ -0.93
COL6A5-204ENST00000512482 PHF12Q96QT6 1004 aa9.2□□□□□ -0.94
COL6A5-204ENST00000512482 PLEKHG5O94827 1062 aa9.15□□□□□ -0.94
COL6A5-204ENST00000512482 MIER1Q8N108 512 aa9.12□□□□□ -0.95
COL6A5-204ENST00000512482 TSPYL2Q9H2G4 693 aaPredicted RBP9.11□□□□□ -0.95
COL6A5-204ENST00000512482 MS4A3Q96HJ5 214 aa9.09□□□□□ -0.95
COL6A5-204ENST00000512482 CCDC61Q9Y6R9 512 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms