RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 SETD2Q9BYW2 2564 aaPredicted RBP1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 CUTAO60888 179 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 ATP2C2O75185 946 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 MMP10P09238 476 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 HMOX1P09601 288 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 CREB1P16220 341 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 CD6P30203 668 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 HADHBP55084 474 aaKnown RBP1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 GOLGA8FQ08AF8 430 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 GOLGA8DPQ0D2H9 430 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 XRCC4Q13426 336 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 SLC9C2Q5TAH2 1124 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 GIMAP6Q6P9H5 292 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 VSTM1Q6UX27 236 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 RASGRP3Q8IV61 690 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 GBP4Q96PP9 640 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 GRIP2Q9C0E4 1043 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 ACBD3Q9H3P7 528 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 ARHGEF10LQ9HCE6 1279 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 GDF3Q9NR23 364 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 KCNQ5Q9NR82 932 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 SLTMQ9NWH9 1034 aaKnown RBP eCLIP1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 SERPINA10Q9UK55 444 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 COG5Q9UP83 839 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 SSX2IPQ9Y2D8 614 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZBTB1Q9Y2K1 713 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 PTPN22Q9Y2R2 807 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 CHMP3Q9Y3E7 222 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 PCDHA8Q9Y5H6 950 aa1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 V9GYY5 206 aaPredicted RBP1.88□□□□□ -2.11
TRAPPC13-211ENST00000512009 NCOA6Q14686 2063 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 DSCAML1Q8TD84 2053 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 PCLOQ9Y6V0 5065 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 GOLGA6L9A6NEM1 432 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 DHX15O43143 795 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 PPFIA3O75145 1194 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 ENDOD1O94919 500 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 ALDH1A1P00352 501 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 RASA1P20936 1047 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 CETN2P41208 172 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 CORO7P57737 925 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 APBA1Q02410 837 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SLC39A14Q15043 492 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 KLHDC7AQ5VTJ3 777 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 OR8K1Q8NGG5 319 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SUSD6Q92537 303 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 GATA6Q92908 595 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SLCO2A1Q92959 643 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 PRR11Q96HE9 360 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 GUCD1Q96NT3 240 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 CHP1Q99653 195 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 INIPQ9NRY2 104 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 LIMA1Q9UHB6 759 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 TTC7AQ9ULT0 858 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 FAM169AQ9Y6X4 670 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 PKHD1P08F94 4074 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 ACACBO00763 2458 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 ABCA1O95477 2261 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SRRM3A6NNA2 597 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 CCP110O43303 1012 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 KIF5CO60282 957 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 DIAPH1O60610 1272 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 PRPF40AO75400 957 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 LGR5O75473 907 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 RECKO95980 971 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 CSB-PGBD3P0DP91 1061 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 JUNDP17535 347 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SOX18P35713 384 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SLC10A2Q12908 348 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 BIRC2Q13490 618 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZNF268Q14587 947 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 EFTUD2Q15029 972 aaKnown RBP eCLIP1.87□□□□□ -2.111e-6■■■■■ 35.8
TRAPPC13-211ENST00000512009 CSPP1Q1MSJ5 1256 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 WDR72Q3MJ13 1102 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 MAP9Q49MG5 647 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 STRIP1Q5VSL9 837 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 OTUD1Q5VV17 481 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 AGMOQ6ZNB7 445 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 ARHGAP30Q7Z6I6 1101 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 KIAA0319LQ8IZA0 1049 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 CCDC82Q8N4S0 544 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 LPIN2Q92539 896 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZDHHC15Q96MV8 337 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 TCHPQ9BT92 498 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SEMA6BQ9H3T3 888 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 HOMER2Q9NSB8 354 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 MCM8Q9UJA3 840 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZNRF3Q9ULT6 936 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 USP9YO00507 2555 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 ASTN2O75129 1339 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 BTNL10A8MVZ5 291 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 O00370 1275 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 PES1O00541 588 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 DHX16O60231 1041 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 FSBPO95073 299 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 PLEKP08567 350 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 UBE2HP62256 183 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 HTRA4P83105 476 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 TIAL1Q01085 375 aaKnown RBP eCLIP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms