RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.17□□□□□ -0.78
NR1I3-228ENST00000511676 FAM133AQ8N9E0 248 aa10.17□□□□□ -0.78
NR1I3-228ENST00000511676 GIMAP8Q8ND71 665 aaPredicted RBP10.17□□□□□ -0.78
NR1I3-228ENST00000511676 MORC4Q8TE76 937 aa10.17□□□□□ -0.78
NR1I3-228ENST00000511676 RAD54LQ92698 747 aa10.17□□□□□ -0.78
NR1I3-228ENST00000511676 MMP19Q99542 508 aa10.17□□□□□ -0.78
NR1I3-228ENST00000511676 RBSNQ9H1K0 784 aa10.17□□□□□ -0.78
NR1I3-228ENST00000511676 KCND2Q9NZV8 630 aa10.17□□□□□ -0.78
NR1I3-228ENST00000511676 FAM184BQ9ULE4 1060 aa10.17□□□□□ -0.78
NR1I3-228ENST00000511676 ATP11BQ9Y2G3 1177 aa10.17□□□□□ -0.78
NR1I3-228ENST00000511676 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.16□□□□□ -0.78
NR1I3-228ENST00000511676 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.16□□□□□ -0.78
NR1I3-228ENST00000511676 PP2D1A8MPX8 630 aa10.16□□□□□ -0.78
NR1I3-228ENST00000511676 DKC1O60832 514 aaKnown RBP eCLIP10.16□□□□□ -0.78
NR1I3-228ENST00000511676 CABYRO75952 493 aa10.16□□□□□ -0.78
NR1I3-228ENST00000511676 RHOBTB3O94955 611 aa10.16□□□□□ -0.78
NR1I3-228ENST00000511676 XRCC6P12956 609 aaKnown RBP eCLIP10.16□□□□□ -0.78
NR1I3-228ENST00000511676 RAG1P15918 1043 aa10.16□□□□□ -0.78
NR1I3-228ENST00000511676 EIF2AK2P19525 551 aaKnown RBP10.16□□□□□ -0.78
NR1I3-228ENST00000511676 CCT6AP40227 531 aaKnown RBP10.16□□□□□ -0.78
NR1I3-228ENST00000511676 ALDH5A1P51649 535 aaPredicted RBP10.16□□□□□ -0.78
NR1I3-228ENST00000511676 TPM4P67936 248 aa10.16□□□□□ -0.78
NR1I3-228ENST00000511676 TRIM32Q13049 653 aa10.16□□□□□ -0.78
NR1I3-228ENST00000511676 ZNF746Q6NUN9 644 aaPredicted RBP10.16□□□□□ -0.78
NR1I3-228ENST00000511676 SMAP1Q8IYB5 467 aaPredicted RBP10.16□□□□□ -0.78
NR1I3-228ENST00000511676 IL31RAQ8NI17 732 aa10.16□□□□□ -0.78
NR1I3-228ENST00000511676 GLT1D1Q96MS3 346 aa10.16□□□□□ -0.78
NR1I3-228ENST00000511676 PNMA5Q96PV4 448 aa10.16□□□□□ -0.78
NR1I3-228ENST00000511676 HSD17B14Q9BPX1 270 aa10.16□□□□□ -0.78
NR1I3-228ENST00000511676 TINF2Q9BSI4 451 aa10.16□□□□□ -0.78
NR1I3-228ENST00000511676 TRIM9Q9C026 710 aa10.16□□□□□ -0.78
NR1I3-228ENST00000511676 AGO4Q9HCK5 861 aaKnown RBP10.16□□□□□ -0.78
NR1I3-228ENST00000511676 XPNPEP3Q9NQH7 507 aa10.16□□□□□ -0.78
NR1I3-228ENST00000511676 PRDM5Q9NQX1 630 aaPredicted RBP10.16□□□□□ -0.78
NR1I3-228ENST00000511676 BMP2KQ9NSY1 1161 aaPredicted RBP10.16□□□□□ -0.78
NR1I3-228ENST00000511676 BLOC1S4Q9NUP1 217 aa10.16□□□□□ -0.78
NR1I3-228ENST00000511676 SYNGAP1Q96PV0 1343 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 ASB14A6NK59 587 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 WDR64B1ANS9 1081 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 SOX1O00570 391 aaPredicted RBP10.15□□□□□ -0.78
NR1I3-228ENST00000511676 DHX15O43143 795 aaKnown RBP10.15□□□□□ -0.78
NR1I3-228ENST00000511676 CLTBP09497 229 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 CDC25AP30304 524 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 CYP2C19P33261 490 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 ATN1P54259 1190 aaPredicted RBP10.15□□□□□ -0.78
NR1I3-228ENST00000511676 PSMD2Q13200 908 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 SNX17Q15036 470 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 IQCB1Q15051 598 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 CCL14Q16627 93 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 TMEM199Q8N511 208 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 CYP2W1Q8TAV3 490 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 MAML3Q96JK9 1138 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 MTRQ99707 1265 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 EIF2AK1Q9BQI3 630 aaKnown RBP10.15□□□□□ -0.78
NR1I3-228ENST00000511676 DNAJC25Q9H1X3 360 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 CBX8Q9HC52 389 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 MAN1B1Q9UKM7 699 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 DNM3Q9UQ16 869 aa10.15□□□□□ -0.78
NR1I3-228ENST00000511676 ZSWIM8A7E2V4 1837 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 SPATA31C2B4DYI2 1134 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 GOLGA6L19H0YKK7 550 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 EYA4O95677 639 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 RPN1P04843 607 aaKnown RBP10.14□□□□□ -0.79
NR1I3-228ENST00000511676 P4HBP07237 508 aaKnown RBP10.14□□□□□ -0.79
NR1I3-228ENST00000511676 SPATA31C1P0DKV0 1188 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 ARP10275 920 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 MYL5Q02045 173 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 PPIGQ13427 754 aaKnown RBP eCLIP10.14□□□□□ -0.79
NR1I3-228ENST00000511676 STIM1Q13586 685 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 LRRC41Q15345 812 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 DPCR1Q3MIW9 517 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 BRDTQ58F21 947 aaPredicted RBP10.14□□□□□ -0.79
NR1I3-228ENST00000511676 GJC2Q5T442 439 aaPredicted RBP10.14□□□□□ -0.79
NR1I3-228ENST00000511676 ZNF658Q5TYW1 1059 aaPredicted RBP10.14□□□□□ -0.79
NR1I3-228ENST00000511676 NCAPH2Q6IBW4 605 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 SARM1Q6SZW1 724 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 UNC13DQ70J99 1090 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 CATSPER3Q86XQ3 398 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 VTI1AQ96AJ9 217 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 NACC1Q96RE7 527 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 GAS2L1Q99501 681 aaPredicted RBP10.14□□□□□ -0.79
NR1I3-228ENST00000511676 TIPINQ9BVW5 301 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 PANK2Q9BZ23 570 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 SEMA6BQ9H3T3 888 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 UNC45AQ9H3U1 944 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 ABHD16BQ9H3Z7 469 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 STARD7Q9NQZ5 370 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 TMEM39AQ9NV64 488 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 PHF24Q9UPV7 400 aa10.14□□□□□ -0.79
NR1I3-228ENST00000511676 RANBP2P49792 3224 aaKnown RBP10.14□□□□□ -0.79
NR1I3-228ENST00000511676 SMCHD1A6NHR9 2005 aa10.13□□□□□ -0.79
NR1I3-228ENST00000511676 BECN2A8MW95 431 aa10.13□□□□□ -0.79
NR1I3-228ENST00000511676 KLRC4O43908 158 aa10.13□□□□□ -0.79
NR1I3-228ENST00000511676 DUSP11O75319 330 aaKnown RBP10.13□□□□□ -0.79
NR1I3-228ENST00000511676 RGS20O76081 388 aa10.13□□□□□ -0.79
NR1I3-228ENST00000511676 KIF20AO95235 890 aa10.13□□□□□ -0.79
NR1I3-228ENST00000511676 MYCLP12524 364 aaPredicted RBP10.13□□□□□ -0.79
NR1I3-228ENST00000511676 KCNA2P16389 499 aa10.13□□□□□ -0.79
NR1I3-228ENST00000511676 DEKP35659 375 aaKnown RBP10.13□□□□□ -0.79
NR1I3-228ENST00000511676 ADCYAP1R1P41586 468 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms