RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 DZANK1Q9NVP4 752 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 DNAJB12Q9NXW2 375 aaKnown RBP7.92□□□□□ -1.14
COPS4-209ENST00000511653 PRR12Q9ULL5 1215 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 CNPY2Q9Y2B0 182 aa7.92□□□□□ -1.14
COPS4-209ENST00000511653 TET1Q8NFU7 2136 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 TRIOO75962 3097 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 TMEM265A0A087WTH1 108 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 GRXCR1A8MXD5 290 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 MINDY4BA8MYZ0 360 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 SCAMP3O14828 347 aaKnown RBP7.91□□□□□ -1.14
COPS4-209ENST00000511653 CTAGE5O15320 804 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 BMP4P12644 408 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 HOXD8P13378 290 aaPredicted RBP7.91□□□□□ -1.14
COPS4-209ENST00000511653 GRIA4P48058 902 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 SBK1Q52WX2 424 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 C20orf194Q5TEA3 1177 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 MAMDC4Q6UXC1 1216 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 C16orf59Q7L2K0 433 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 DDX11Q96FC9 970 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 TOX2Q96NM4 488 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 KATNBL1Q9H079 304 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 RASSF4Q9H2L5 321 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 SLC38A10Q9HBR0 1119 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 RAVER2Q9HCJ3 691 aaKnown RBP7.91□□□□□ -1.14
COPS4-209ENST00000511653 PRDM6Q9NQX0 595 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 NYAP2Q9P242 653 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 NAGPAQ9UK23 515 aa7.91□□□□□ -1.14
COPS4-209ENST00000511653 DDX49Q9Y6V7 483 aaKnown RBP7.91□□□□□ -1.14
COPS4-209ENST00000511653 DCDC2CA8MYV0 355 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 H3BM21 787 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 M0R2C6 588 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 ATP2A1O14983 1001 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 GPAA1O43292 621 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 DUSP11O75319 330 aaKnown RBP7.9□□□□□ -1.14
COPS4-209ENST00000511653 TIMP1P01033 207 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 ASGR1P07306 291 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 C6orf222P0C671 652 aaPredicted RBP7.9□□□□□ -1.14
COPS4-209ENST00000511653 EDN3P14138 238 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 CST5P28325 142 aaPredicted RBP7.9□□□□□ -1.14
COPS4-209ENST00000511653 CDK7P50613 346 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 KRT76Q01546 638 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 HYAL2Q12891 473 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 ACVR2BQ13705 512 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 SPRED3Q2MJR0 410 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 CCDC144BQ3MJ40 725 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 LCE2CQ5TA81 110 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 ARMCX2Q7L311 632 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 RASGRP2Q7LDG7 609 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 MSL3Q8N5Y2 521 aaKnown RBP7.9□□□□□ -1.14
COPS4-209ENST00000511653 NUP133Q8WUM0 1156 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 CHMP4CQ96CF2 233 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 CEP95Q96GE4 821 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 FRMD6Q96NE9 622 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 MDFIQ99750 246 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 LRRCC1Q9C099 1032 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 UPF3AQ9H1J1 476 aaKnown RBP7.9□□□□□ -1.14
COPS4-209ENST00000511653 MKNK2Q9HBH9 465 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 HOMER2Q9NSB8 354 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 CLIP2Q9UDT6 1046 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 FAM184BQ9ULE4 1060 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 MUC6Q6W4X9 2439 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 TANC1Q9C0D5 1861 aa7.9□□□□□ -1.14
COPS4-209ENST00000511653 PLIN4Q96Q06 1357 aa7.9□□□□□ -1.15
COPS4-209ENST00000511653 TRIP12Q14669 1992 aaPredicted RBP7.9□□□□□ -1.15
COPS4-209ENST00000511653 ASTN1O14525 1302 aa7.9□□□□□ -1.15
COPS4-209ENST00000511653 PTPRSQ13332 1948 aa7.9□□□□□ -1.15
COPS4-209ENST00000511653 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.89□□□□□ -1.15
COPS4-209ENST00000511653 ACRP10323 421 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 CSF2RAP15509 400 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 MX2P20592 715 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 NRLP54845 237 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 GJA9P57773 515 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 GPLD1P80108 840 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 BEX3Q00994 111 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 CNTN2Q02246 1040 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 TMEM240Q5SV17 173 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 RASIP1Q5U651 963 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 MFSD5Q6N075 450 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 ZSCAN25Q6NSZ9 544 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 FOXR1Q6PIV2 292 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 FCHSD1Q86WN1 690 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 NT5DC4Q86YG4 428 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 FAM126BQ8IXS8 530 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 CCDC144CPQ8IYA2 1237 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 ANKRD35Q8N283 1001 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 KBTBD3Q8NAB2 608 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 PRPF38AQ8NAV1 312 aaKnown RBP7.89□□□□□ -1.15
COPS4-209ENST00000511653 APPBP2Q92624 585 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 TIFAQ96CG3 184 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 GLT1D1Q96MS3 346 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 PBX4Q9BYU1 374 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 LIN7BQ9HAP6 207 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 ECHDC1Q9NTX5 307 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 MTMR4Q9NYA4 1195 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 FAM8A1Q9UBU6 413 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 SCN10AQ9Y5Y9 1956 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 ELP1O95163 1332 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 UMODL1Q5DID0 1318 aa7.89□□□□□ -1.15
COPS4-209ENST00000511653 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.89□□□□□ -1.15
COPS4-209ENST00000511653 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms