RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 NCAM2O15394 837 aa10.63□□□□□ -0.71
POLR2J3-215ENST00000511313 EXOC3O60645 756 aa10.63□□□□□ -0.71
POLR2J3-215ENST00000511313 PDIA5Q14554 519 aa10.63□□□□□ -0.71
POLR2J3-215ENST00000511313 NFRKBQ6P4R8 1299 aa10.63□□□□□ -0.71
POLR2J3-215ENST00000511313 OTOP1Q7RTM1 612 aa10.63□□□□□ -0.71
POLR2J3-215ENST00000511313 UROC1Q96N76 676 aa10.63□□□□□ -0.71
POLR2J3-215ENST00000511313 PABPN1LA6NDY0 278 aaKnown RBP10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 STK25O00506 426 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 U2AF1L4Q8WU68 220 aaKnown RBP10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 ABHD8Q96I13 439 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 CLMNQ96JQ2 1002 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 NUCKS1Q9H1E3 243 aaKnown RBP10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 PXMP2Q9NR77 195 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 TUBE1Q9UJT0 475 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 CYP2D7A0A087X1C5 515 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 IL18RAPO95256 599 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 SERPINC1P01008 464 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 ODF2LQ9ULJ1 636 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 PLIN4Q96Q06 1357 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 VWA3AA6NCI4 1184 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 NAP1L1P55209 391 aaKnown RBP10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 PTGISQ16647 500 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 HS1BP3Q53T59 392 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 ITIH5Q86UX2 942 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 BBS5Q8N3I7 341 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 ATP8B4Q8TF62 1192 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 PHKBQ93100 1093 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 ACSF2Q96CM8 615 aaPredicted RBP10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 KAZALD1Q96I82 304 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 GABBR1Q9UBS5 961 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 BCRP11274 1271 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 PARVGQ9HBI0 331 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 STIM2Q9P246 746 aa10.62□□□□□ -0.71
POLR2J3-215ENST00000511313 CNTNAP2Q9UHC6 1331 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 H3BRB1 525 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 HSPA8P11142 646 aaKnown RBP10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 ATN1P54259 1190 aaPredicted RBP10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 PTK7Q13308 1070 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 PDZD4Q76G19 769 aaPredicted RBP10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 RAB11FIP4Q86YS3 637 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 TBC1D32Q96NH3 1257 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 NUP88Q99567 741 aaPredicted RBP10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 POP1Q99575 1024 aaKnown RBP10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 PDCD2LQ9BRP1 358 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 CFHR5Q9BXR6 569 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 HIPK3Q9H422 1215 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 TUT1Q9H6E5 874 aaKnown RBP10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 HNRNPDLO14979 420 aaKnown RBP10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 BTG3Q14201 252 aaPredicted RBP10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 CCDC149Q6ZUS6 474 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 SPAG5Q96R06 1193 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 SUCLA2Q9P2R7 463 aaPredicted RBP10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 UBE4BO95155 1302 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 ADCY6O43306 1168 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 ITGBL1O95965 494 aaPredicted RBP10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 Q3C1V9 767 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 MED7O43513 233 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 TADA2AO75478 443 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 OATP04181 439 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 PRR29P0C7W0 189 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 PRKCZQ05513 592 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 PRPF4BQ13523 1007 aaKnown RBP10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 CCDC181Q5TID7 509 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 SWSAP1Q6NVH7 229 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 PLPPR4Q7Z2D5 763 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 SYTL5Q8TDW5 730 aaPredicted RBP10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 MED10Q9BTT4 135 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 C11orf84Q9BUA3 381 aaPredicted RBP10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 SQORQ9Y6N5 450 aa10.61□□□□□ -0.71
POLR2J3-215ENST00000511313 GCNT3O95395 438 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 HARSP12081 509 aaKnown RBP10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 NECTIN1Q15223 517 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 STILQ15468 1287 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 RIPOR3Q96MK2 946 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 ZNF558Q96NG5 402 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 LMAN2LQ9H0V9 348 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 JMJD4Q9H9V9 463 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 EMILIN3Q9NT22 766 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 SEPT11Q9NVA2 429 aaKnown RBP10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 RAB23Q9ULC3 237 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 USO1O60763 962 aaKnown RBP10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 MMP1P03956 469 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 RXRAP19793 462 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 CYP4A11Q02928 519 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 TMEM132BQ14DG7 1078 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 FBXO18Q8NFZ0 1043 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 GPKOWQ92917 476 aaPredicted RBP eCLIP10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 RIOX1Q9H6W3 641 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 LY9Q9HBG7 655 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 MRPS17Q9Y2R5 130 aaKnown RBP10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 AK9Q5TCS8 1911 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 HUS1O60921 280 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 RTP1P59025 263 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 SPA17Q15506 151 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 NT5DC4Q86YG4 428 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 TBC1D10CQ8IV04 446 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms